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The map label for this gene is omp16 [H]

Identifier: 85374727

GI number: 85374727

Start: 1942460

End: 1942972

Strand: Reverse

Name: omp16 [H]

Synonym: ELI_09500

Alternate gene names: 85374727

Gene position: 1942972-1942460 (Counterclockwise)

Preceding gene: 85374728

Following gene: 85374725

Centisome position: 63.65

GC content: 65.3

Gene sequence:

>513_bases
ATGAATACCAAATTCGCTGCAGTTATGATGCTGGCCGGGACTGCCAGCCTTGCCGCCTGCAAGACCACCGCGCCCGACGA
ACTGCCGCCCGATCCGGGCCCGGTCGCGACGGCGCCGACAACGCCGACGACCCCGGCCGGCCCGGCAGTGGGTACGCAGG
AGCACTTCGTACGCGCGGTGAACGGGCAGAACATCATCTATTTCGACACCGACCGGTTCAACATCGACAGCGCCGATGCC
GCCGCCCTGCAGACGCAGGCGCAGTATCTCAGCCAGTACCCGAATGTTACCGTCACGATCGAAGGGCATGCCGACGAACG
CGGCACCCGCGATTACAACCTCGCGCTGGGCGAGCGTCGCGCCAATGCGGCCAAGAACTATCTTGTCAGCCTGGGCATTC
CGGCGACCCGCATTTCGACGGTGAGTTACGGTGAGGAGCGCCCGGTCGCAACCGCTTCCACACCCGAGGCATGGGCGCAG
AACCGCCGCGCGGTGACGGTCGTCATCAACTGA

Upstream 100 bases:

>100_bases
GACCGATTTTGCCATAATCGCGTTCTATCCAGGACACTTGAAGAACAGGGGCGGGTCGTGCCGCACAAACAGGGCAATCT
ATATTGGTGAGGAACTAGCC

Downstream 100 bases:

>100_bases
TTGTCGGGGAGGGGCTTCGCTTGCCGCGGAGCCCTTCCTAGCCTCAACGCTGGGTAAAGGCCGTCACCGTGATCGGCTGC
GCAGCAGTCGCGCCCGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: 16.5 kDa minor OMP; 16 kDa OMP; Minor outer membrane protein omp16 [H]

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MNTKFAAVMMLAGTASLAACKTTAPDELPPDPGPVATAPTTPTTPAGPAVGTQEHFVRAVNGQNIIYFDTDRFNIDSADA
AALQTQAQYLSQYPNVTVTIEGHADERGTRDYNLALGERRANAAKNYLVSLGIPATRISTVSYGEERPVATASTPEAWAQ
NRRAVTVVIN

Sequences:

>Translated_170_residues
MNTKFAAVMMLAGTASLAACKTTAPDELPPDPGPVATAPTTPTTPAGPAVGTQEHFVRAVNGQNIIYFDTDRFNIDSADA
AALQTQAQYLSQYPNVTVTIEGHADERGTRDYNLALGERRANAAKNYLVSLGIPATRISTVSYGEERPVATASTPEAWAQ
NRRAVTVVIN
>Mature_170_residues
MNTKFAAVMMLAGTASLAACKTTAPDELPPDPGPVATAPTTPTTPAGPAVGTQEHFVRAVNGQNIIYFDTDRFNIDSADA
AALQTQAQYLSQYPNVTVTIEGHADERGTRDYNLALGERRANAAKNYLVSLGIPATRISTVSYGEERPVATASTPEAWAQ
NRRAVTVVIN

Specific function: Thought To Play A Role In Bacterial Envelope Integrity. Very Strongly Associated With The Peptidoglycan. [C]

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1786962, Length=104, Percent_Identity=51.9230769230769, Blast_Score=116, Evalue=7e-28,
Organism=Escherichia coli, GI48994946, Length=104, Percent_Identity=35.5769230769231, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006664
- InterPro:   IPR006690
- InterPro:   IPR006665
- InterPro:   IPR014169 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 18035; Mature: 18035

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTKFAAVMMLAGTASLAACKTTAPDELPPDPGPVATAPTTPTTPAGPAVGTQEHFVRAV
CCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEE
NGQNIIYFDTDRFNIDSADAAALQTQAQYLSQYPNVTVTIEGHADERGTRDYNLALGERR
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCHH
ANAAKNYLVSLGIPATRISTVSYGEERPVATASTPEAWAQNRRAVTVVIN
HHHHHCEEEECCCCHHEEEEECCCCCCCCCCCCCCHHHHCCCCEEEEEEC
>Mature Secondary Structure
MNTKFAAVMMLAGTASLAACKTTAPDELPPDPGPVATAPTTPTTPAGPAVGTQEHFVRAV
CCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHEEEE
NGQNIIYFDTDRFNIDSADAAALQTQAQYLSQYPNVTVTIEGHADERGTRDYNLALGERR
CCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEECCHH
ANAAKNYLVSLGIPATRISTVSYGEERPVATASTPEAWAQNRRAVTVVIN
HHHHHCEEEECCCCHHEEEEECCCCCCCCCCCCCCHHHHCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8063379; 10456959 [H]