Click here to switch to the map view.

The map label for this gene is viuA [H]

Identifier: 85374630

GI number: 85374630

Start: 1832644

End: 1835277

Strand: Reverse

Name: viuA [H]

Synonym: ELI_09015

Alternate gene names: 85374630

Gene position: 1835277-1832644 (Counterclockwise)

Preceding gene: 85374632

Following gene: 85374629

Centisome position: 60.13

GC content: 63.44

Gene sequence:

>2634_bases
ATGTTCCGCGGCCGCGCGCCGCGCAAGGGATTTGCCCTGCTGGCCGGCGCTGCCGCCGTCGCTCTGGTGCCGGGCGCTGC
ACTGGCGCAGGACCAGGAAGTGGCCGATCTCGATGCCGACGAAATGCCGCTCGAAACCGAACAGCAGGACCGCGGCAACG
TCATCGTCGTGACCGCGACCAAGCGCGAGCAGACGCTGCAGGAAACCCCGATCTCGGTCAGCGTGACTTCGGGCGAGACG
CTGGAGCAGGCGCAGATTCGCGACGTGCTCGACCTGCAGACGGTCACACCGTCGCTCCGCGTAAGCCAGCTGCAGACCTC
CTCGGCCTCCACCTTCATCATCCGCGGCTTCGGCAACGGCGACAACAACCTCGGTATCGAGCCGTCGGTCGGTGTCTTCA
TCGACGGCGTGTTCCGCTCGCGTTCGGCCGCAGCCCTGTCCGACCTTCCCAACGTGCAGCGCATCGAGGTCCTCAACGGC
CCGCAATCGACCCTGTTCGGCAAAAACGCGTCGGCCGGTGTGATCTCGGTCGTCACCCGCCCGCCGCAGTTCGAATTCGG
CGGCAGCGTGGAAGCGGTGTACGGCAACTTCGACACCGTCGTGCTCAAGGGTGACATTACCGGCCCGATCACCGACACCG
TCGCCTTCTCGCTCGACGGCAGCTACCAGCGCCGCGACGGCTATGCCGACATCGTCAACCTCGACGAAAAGCAGAACGAT
CGTAACCGCTATGCGGTGCGCGGCCAGCTGCTGTTCGAACCGAATCCGGACTTCACCATCCGTGCGATGGCCGATTATTC
GAAGATCGACGAAGTCTGCTGCCAGGTCGGCACGCTCGTCGCCGGTCCGGCCGCTGCCGCGATCACCGCTCTGGGCGGCC
AGTTCAGCCTGCCGAGCGATTTCTTCGAATACGAAGCCTTCCTCAACCAGGTTCCGACCAACGAGGTCGAAAACTACGGC
GGCTCGGTGCAGATCGAATATTCGACCGGCCCGCTGACCTTCACCTCGATCACGGCCTATCGCGAACTGCGCAACGCCTT
CACGTCCGACATCGACTTTACAAGCCTCGATGTCGCCAACGAAGTGCGCGACCAGGCGGTCGACACCTTCACGCAGGAAT
TCCGCATCACGTCGGACTTCGACGGCCCGCTCAACTTCCTGCTCGGCGGCTTCTACTTCGACGAAAGCATCACGCAGGAC
AGCCGCATCGTGAACGGCTCCCAGATCCGCGATTTCTTCGAAATCCTCGGTGGCGCCAATCCGGTTGCGGTCATTACCGG
CCAGCCGACGCTGTTCAACGGGCTGGAAGCTGCCTTCGGCTTCCCGCAGGAGAGCATCTTCAACACGCCGCTGCTGACGC
AGGAAAATTTCGCGGTCGACAACAAGGCATACTCGATCTTCGGTACGATCGATTTCGAACCGATCGACGGCCTCGTCTTC
ACCGTCGGCGGTAACTACACCGACGACAGCAAGGACTTCTCGCTGTCGCAGACGAGCTTCGACCCGCTCGCGCAGGTCAA
CTTCGTCGATGCCTTCATCACGCAGGCAACCGCAGCCAATCCCGGCCTTCCGACCGTCACGTCGCGTGCGCAGTTCCAGG
CGCTTCCGGCACCCGTCCAGCAGAGCCTGCTGGCCGCCGCGACCAATCCGGGCGTAAATCCGCTGCTCGGCTTGGCTGCG
TTCCAGTTCCAGCCGCCATTCTTGAACGTGCCGAATGCCGTGGAACCGGGCGAGACCAACGACGACAAGTTCACCTACCT
GCTGCGCGTGGCCTACCAGATCATTCCGGAAGTGAATGTCTATGCCAGCTACGCGACCGGCTTCAAGGCGAGTTCGATCA
ACCTGTCGCGTGACAGCCGTCCGCTCAGCACGGACTTCGTCGCCGGGCCGCGCGGTTCGACCTTCGCGGCGCCGGATTCG
CCGATCATCAACGCCGGGCTCGCGCTGCCGAACCTGTCCTCCGGTTCGCGTTTCGCCGGGCCGGAAGACACCACCGTCTA
TGAAATCGGCCTCAAGGCGCAGCTGGACGGTGTCAGCTTCAACCTCGCGCTGTTCGACCAGACGATCGAAGGGTTCCAGA
GCCTTGCCTTCACCGGCACCGGCTTCGCTCTGCGCAACGCCGGTGAGCAGTCGGTCAAGGGCTTCGAGCTGAGCTCGACG
ATCCAGCCGGCCGATCCGCTGGTGTTCACTTTCGCGATGACCTACCTCGATCCGCTGTTCGACAGCTTCCCGGGTAGCGT
ATTGGGCGACCTGACCGGCGAGACCCCGGCGGGCATCCCCGAATTCGCGATCGCGGCTTCGGCGACCTACACCCACGAAT
TCGGTGTGTCGGGCAATCGCCTGATCGGTCGCATCGACTACAACCACGAAAGCAATACCGACATCAACAACGGTCTGCCG
ACATTCAACGCGGCCCTGGGCAACACCCAGATCTTCCGCCGCGAAGTGAACCTGGTCAACACGTCGCTGACGCTGGCGCT
GGACAATGGCCTCGAAGTCGGTGCCTATGCCCGCAACCTGCTGAACGACCAGTTCATCACGACCGTCTTCGACGGCGTGG
CGCAGGCCGGCACGGTGCTCGGCTACCCGAGCCAGCCGCGCACTTACGGCGGTGTCGTTCGCTTCAAGTTCTGA

Upstream 100 bases:

>100_bases
GCGGGCGAACAGTATTGGCGCGCGTCTAAGCGGTCGTGGCTCCTCCCCCTCGAACGATGCGGCCGCCAGGAAGAGGAAAA
ACTCCATGATTTCTAACACG

Downstream 100 bases:

>100_bases
TCCGCGCGATCAGCTTTGTATTCGGGAAGGGGGCTTTCGGGCCCCCTTTTCTTTGCGCTTGCGACATTTTCCGGACAAAG
TGCACATGTTTAGTGCGATA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 877; Mature: 877

Protein sequence:

>877_residues
MFRGRAPRKGFALLAGAAAVALVPGAALAQDQEVADLDADEMPLETEQQDRGNVIVVTATKREQTLQETPISVSVTSGET
LEQAQIRDVLDLQTVTPSLRVSQLQTSSASTFIIRGFGNGDNNLGIEPSVGVFIDGVFRSRSAAALSDLPNVQRIEVLNG
PQSTLFGKNASAGVISVVTRPPQFEFGGSVEAVYGNFDTVVLKGDITGPITDTVAFSLDGSYQRRDGYADIVNLDEKQND
RNRYAVRGQLLFEPNPDFTIRAMADYSKIDEVCCQVGTLVAGPAAAAITALGGQFSLPSDFFEYEAFLNQVPTNEVENYG
GSVQIEYSTGPLTFTSITAYRELRNAFTSDIDFTSLDVANEVRDQAVDTFTQEFRITSDFDGPLNFLLGGFYFDESITQD
SRIVNGSQIRDFFEILGGANPVAVITGQPTLFNGLEAAFGFPQESIFNTPLLTQENFAVDNKAYSIFGTIDFEPIDGLVF
TVGGNYTDDSKDFSLSQTSFDPLAQVNFVDAFITQATAANPGLPTVTSRAQFQALPAPVQQSLLAAATNPGVNPLLGLAA
FQFQPPFLNVPNAVEPGETNDDKFTYLLRVAYQIIPEVNVYASYATGFKASSINLSRDSRPLSTDFVAGPRGSTFAAPDS
PIINAGLALPNLSSGSRFAGPEDTTVYEIGLKAQLDGVSFNLALFDQTIEGFQSLAFTGTGFALRNAGEQSVKGFELSST
IQPADPLVFTFAMTYLDPLFDSFPGSVLGDLTGETPAGIPEFAIAASATYTHEFGVSGNRLIGRIDYNHESNTDINNGLP
TFNAALGNTQIFRREVNLVNTSLTLALDNGLEVGAYARNLLNDQFITTVFDGVAQAGTVLGYPSQPRTYGGVVRFKF

Sequences:

>Translated_877_residues
MFRGRAPRKGFALLAGAAAVALVPGAALAQDQEVADLDADEMPLETEQQDRGNVIVVTATKREQTLQETPISVSVTSGET
LEQAQIRDVLDLQTVTPSLRVSQLQTSSASTFIIRGFGNGDNNLGIEPSVGVFIDGVFRSRSAAALSDLPNVQRIEVLNG
PQSTLFGKNASAGVISVVTRPPQFEFGGSVEAVYGNFDTVVLKGDITGPITDTVAFSLDGSYQRRDGYADIVNLDEKQND
RNRYAVRGQLLFEPNPDFTIRAMADYSKIDEVCCQVGTLVAGPAAAAITALGGQFSLPSDFFEYEAFLNQVPTNEVENYG
GSVQIEYSTGPLTFTSITAYRELRNAFTSDIDFTSLDVANEVRDQAVDTFTQEFRITSDFDGPLNFLLGGFYFDESITQD
SRIVNGSQIRDFFEILGGANPVAVITGQPTLFNGLEAAFGFPQESIFNTPLLTQENFAVDNKAYSIFGTIDFEPIDGLVF
TVGGNYTDDSKDFSLSQTSFDPLAQVNFVDAFITQATAANPGLPTVTSRAQFQALPAPVQQSLLAAATNPGVNPLLGLAA
FQFQPPFLNVPNAVEPGETNDDKFTYLLRVAYQIIPEVNVYASYATGFKASSINLSRDSRPLSTDFVAGPRGSTFAAPDS
PIINAGLALPNLSSGSRFAGPEDTTVYEIGLKAQLDGVSFNLALFDQTIEGFQSLAFTGTGFALRNAGEQSVKGFELSST
IQPADPLVFTFAMTYLDPLFDSFPGSVLGDLTGETPAGIPEFAIAASATYTHEFGVSGNRLIGRIDYNHESNTDINNGLP
TFNAALGNTQIFRREVNLVNTSLTLALDNGLEVGAYARNLLNDQFITTVFDGVAQAGTVLGYPSQPRTYGGVVRFKF
>Mature_877_residues
MFRGRAPRKGFALLAGAAAVALVPGAALAQDQEVADLDADEMPLETEQQDRGNVIVVTATKREQTLQETPISVSVTSGET
LEQAQIRDVLDLQTVTPSLRVSQLQTSSASTFIIRGFGNGDNNLGIEPSVGVFIDGVFRSRSAAALSDLPNVQRIEVLNG
PQSTLFGKNASAGVISVVTRPPQFEFGGSVEAVYGNFDTVVLKGDITGPITDTVAFSLDGSYQRRDGYADIVNLDEKQND
RNRYAVRGQLLFEPNPDFTIRAMADYSKIDEVCCQVGTLVAGPAAAAITALGGQFSLPSDFFEYEAFLNQVPTNEVENYG
GSVQIEYSTGPLTFTSITAYRELRNAFTSDIDFTSLDVANEVRDQAVDTFTQEFRITSDFDGPLNFLLGGFYFDESITQD
SRIVNGSQIRDFFEILGGANPVAVITGQPTLFNGLEAAFGFPQESIFNTPLLTQENFAVDNKAYSIFGTIDFEPIDGLVF
TVGGNYTDDSKDFSLSQTSFDPLAQVNFVDAFITQATAANPGLPTVTSRAQFQALPAPVQQSLLAAATNPGVNPLLGLAA
FQFQPPFLNVPNAVEPGETNDDKFTYLLRVAYQIIPEVNVYASYATGFKASSINLSRDSRPLSTDFVAGPRGSTFAAPDS
PIINAGLALPNLSSGSRFAGPEDTTVYEIGLKAQLDGVSFNLALFDQTIEGFQSLAFTGTGFALRNAGEQSVKGFELSST
IQPADPLVFTFAMTYLDPLFDSFPGSVLGDLTGETPAGIPEFAIAASATYTHEFGVSGNRLIGRIDYNHESNTDINNGLP
TFNAALGNTQIFRREVNLVNTSLTLALDNGLEVGAYARNLLNDQFITTVFDGVAQAGTVLGYPSQPRTYGGVVRFKF

Specific function: Receptor for ferric vibriobactin [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1787344, Length=235, Percent_Identity=27.6595744680851, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788478, Length=143, Percent_Identity=27.972027972028, Blast_Score=64, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010105 [H]

Pfam domain/function: PF07715 Plug [H]

EC number: NA

Molecular weight: Translated: 94121; Mature: 94121

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRGRAPRKGFALLAGAAAVALVPGAALAQDQEVADLDADEMPLETEQQDRGNVIVVTAT
CCCCCCCCCCCEEHHHHHHHHHCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEC
KREQTLQETPISVSVTSGETLEQAQIRDVLDLQTVTPSLRVSQLQTSSASTFIIRGFGNG
CHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEECCC
DNNLGIEPSVGVFIDGVFRSRSAAALSDLPNVQRIEVLNGPQSTLFGKNASAGVISVVTR
CCCCCCCCCCCEEEEEHHHCCCHHHHHCCCCCEEEEEECCCCHHCCCCCCCCCEEEEEEC
PPQFEFGGSVEAVYGNFDTVVLKGDITGPITDTVAFSLDGSYQRRDGYADIVNLDEKQND
CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCC
RNRYAVRGQLLFEPNPDFTIRAMADYSKIDEVCCQVGTLVAGPAAAAITALGGQFSLPSD
CCEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCHH
FFEYEAFLNQVPTNEVENYGGSVQIEYSTGPLTFTSITAYRELRNAFTSDIDFTSLDVAN
HHHHHHHHHHCCCCHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCEEHHHHH
EVRDQAVDTFTQEFRITSDFDGPLNFLLGGFYFDESITQDSRIVNGSQIRDFFEILGGAN
HHHHHHHHHHHHHEEEECCCCCCHHHHHHHEEECCCCCCCCEECCHHHHHHHHHHHCCCC
PVAVITGQPTLFNGLEAAFGFPQESIFNTPLLTQENFAVDNKAYSIFGTIDFEPIDGLVF
CEEEEECCCHHHHCHHHHHCCCHHHHCCCCCCCCCCCEECCCEEEEEEEEECCCCCCEEE
TVGGNYTDDSKDFSLSQTSFDPLAQVNFVDAFITQATAANPGLPTVTSRAQFQALPAPVQ
EECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHH
QSLLAAATNPGVNPLLGLAAFQFQPPFLNVPNAVEPGETNDDKFTYLLRVAYQIIPEVNV
HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
YASYATGFKASSINLSRDSRPLSTDFVAGPRGSTFAAPDSPIINAGLALPNLSSGSRFAG
EEEECCCCEECEEECCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
PEDTTVYEIGLKAQLDGVSFNLALFDQTIEGFQSLAFTGTGFALRNAGEQSVKGFELSST
CCCCEEEEEEEEEEECCEEEEEEEHHHHHHHHHHHEECCCCHHHHCCCCHHCCCEEECCC
IQPADPLVFTFAMTYLDPLFDSFPGSVLGDLTGETPAGIPEFAIAASATYTHEFGVSGNR
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHEEECCEEEEECCCCCCE
LIGRIDYNHESNTDINNGLPTFNAALGNTQIFRREVNLVNTSLTLALDNGLEVGAYARNL
EEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHH
LNDQFITTVFDGVAQAGTVLGYPSQPRTYGGVVRFKF
HCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MFRGRAPRKGFALLAGAAAVALVPGAALAQDQEVADLDADEMPLETEQQDRGNVIVVTAT
CCCCCCCCCCCEEHHHHHHHHHCCCHHHCCCCHHHCCCCCCCCCCCCCCCCCCEEEEEEC
KREQTLQETPISVSVTSGETLEQAQIRDVLDLQTVTPSLRVSQLQTSSASTFIIRGFGNG
CHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEEEECCC
DNNLGIEPSVGVFIDGVFRSRSAAALSDLPNVQRIEVLNGPQSTLFGKNASAGVISVVTR
CCCCCCCCCCCEEEEEHHHCCCHHHHHCCCCCEEEEEECCCCHHCCCCCCCCCEEEEEEC
PPQFEFGGSVEAVYGNFDTVVLKGDITGPITDTVAFSLDGSYQRRDGYADIVNLDEKQND
CCCCCCCCCEEEEECCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCC
RNRYAVRGQLLFEPNPDFTIRAMADYSKIDEVCCQVGTLVAGPAAAAITALGGQFSLPSD
CCEEEEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHCCHHCCCHHHHHHHCCCCCCCCHH
FFEYEAFLNQVPTNEVENYGGSVQIEYSTGPLTFTSITAYRELRNAFTSDIDFTSLDVAN
HHHHHHHHHHCCCCHHHHCCCEEEEEECCCCEEEHHHHHHHHHHHHHCCCCCCEEHHHHH
EVRDQAVDTFTQEFRITSDFDGPLNFLLGGFYFDESITQDSRIVNGSQIRDFFEILGGAN
HHHHHHHHHHHHHEEEECCCCCCHHHHHHHEEECCCCCCCCEECCHHHHHHHHHHHCCCC
PVAVITGQPTLFNGLEAAFGFPQESIFNTPLLTQENFAVDNKAYSIFGTIDFEPIDGLVF
CEEEEECCCHHHHCHHHHHCCCHHHHCCCCCCCCCCCEECCCEEEEEEEEECCCCCCEEE
TVGGNYTDDSKDFSLSQTSFDPLAQVNFVDAFITQATAANPGLPTVTSRAQFQALPAPVQ
EECCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCCHHH
QSLLAAATNPGVNPLLGLAAFQFQPPFLNVPNAVEPGETNDDKFTYLLRVAYQIIPEVNV
HHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
YASYATGFKASSINLSRDSRPLSTDFVAGPRGSTFAAPDSPIINAGLALPNLSSGSRFAG
EEEECCCCEECEEECCCCCCCCCCCEECCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
PEDTTVYEIGLKAQLDGVSFNLALFDQTIEGFQSLAFTGTGFALRNAGEQSVKGFELSST
CCCCEEEEEEEEEEECCEEEEEEEHHHHHHHHHHHEECCCCHHHHCCCCHHCCCEEECCC
IQPADPLVFTFAMTYLDPLFDSFPGSVLGDLTGETPAGIPEFAIAASATYTHEFGVSGNR
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHEEECCEEEEECCCCCCE
LIGRIDYNHESNTDINNGLPTFNAALGNTQIFRREVNLVNTSLTLALDNGLEVGAYARNL
EEEEEECCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHEEEEEEEEEECCCCCHHHHHHHH
LNDQFITTVFDGVAQAGTVLGYPSQPRTYGGVVRFKF
HCCHHHHHHHHHHHHCCEEECCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1317381 [H]