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The map label for this gene is degS [C]

Identifier: 85374577

GI number: 85374577

Start: 1782974

End: 1784524

Strand: Direct

Name: degS [C]

Synonym: ELI_08750

Alternate gene names: 85374577

Gene position: 1782974-1784524 (Clockwise)

Preceding gene: 85374573

Following gene: 85374578

Centisome position: 58.41

GC content: 67.7

Gene sequence:

>1551_bases
ATGATCCGCTTGCTGACCCTCTTCGCTGTGCTTCTCGGCCTCGCCCTGCCGCACCCTGCCCTCGCCGACCCCGCCGATAT
CCAGGCCGCTGCGCGCGGCGTCGTGCGTGTGGTGATTATCGGCAGCGACGGCGAGCGGGTCTATCCGATCAGCCACGGCA
GCGGCTTTGCCGTCGCGCCGACACGGATCGTCACCAATGCCCATGTCGTGCGTGAAGCGGCGCAGGACGATTCGCTGCGC
ATCGGCATCGTGCCGAGCGATGGCGACGATGCCAGCTATGCGCGGATCGTAAGGATCGCGCCGGCCAAGGATCTTGCGCT
GCTGGAGATTACCGGGGGCGAGCTGCGACTGCCGCCGCTCACCCTCGCCGGCTCGCGAGAGCGCGATGCGGCGGAGGTCA
TATCGGTCGGCTATCCCATGAATGTCGACCGCGCACAGGGATTGGAGATCGACGATATCTTCCGGCCCCAACCGACCGTC
AACAGCCGCGGCTACATCTCAGGCTCGCGGCCCAGCACGCAATTCGACACGATCCTGCACACGGCCCCCATCGCGCGGGG
CAATTCGGGCGGGCCGCTGCTCGACCAGTGTGGTCGCGTGCTCGGGGTCAACAGCTTCGGTGCGGATGGCGAAGGCGCCG
ATGGCGAATTCTACTTCGCCGTCAGCAATCGCGAGCTGATCCCCTTCCTGCGGGCGAGCGATGTCACCCCGCGCACCAAT
GGCCAGCCGTGTCGCTCGATCGCCGAACTGGACGCGCAGGAGCGGGAACGCGCCGCGCAGGAGCAGGCGCTGGTGCGGCA
GGAAATCGCCGCCCGCGCGACCGCCGAGCGCGAACGGCGCGACCGCGCCCAGCTCGAGGCCGAGCTGCAGGTGCAGGAAA
GCCGCGAGAACCAGATGGCGATGGCGCTTATCGCTCTGCTGATCGGTGTCGGCGGCGGTTATGCGACCTATCTCGCCTGG
GGGCGCGAAGACGGCGAGAGGCAGCGCATGATCGCGGGCACGATCGCTGGCGTCGGCCTGATCGCTGCCTTGGCGCTGTG
GTTTACGCGCCCCGGCCTTGATGCGATCGACCGCAAGGTCGCAGCGGCAATGGCCGAGGGTGACGAGAATGGCGACCCCG
ATGGCACCGCGCTAGCCTCGCCCGGAAACGCCAGCCTCACCTGCCGCCTGGTACCCGAGCGCAGCCGCATCACCGGCGCG
CCTGCAGAAACTGTGGAATTCGACTGGGCCGAAAACGGCTGCGTCAACGGCCGCACGCAATACGGCTTCCAGTCGGGCGA
ATGGAGCCGCGTCTTCGTGCCCAATGACGAAGCCGCCGTCGCAATCAACCGCTACGATCCCGAGACCCGCACCTATCGTA
CCGACCGCTACTTGCTCACCGCCAGCGCCATGCGCGCGGCGCGACAAGCGCGTGAAGCCTACACGCCGCCCGCCTGCACG
GTCGATGGCGCTGCGGGGCAGCTCGGCGACCTGCAAAGCGCAGTGACGAGCCAGTTGCCGGAGCGACCAAACGAGCGGCT
GGTCTATCGCTGCGAGGTCAAGGACAGATAA

Upstream 100 bases:

>100_bases
GAGATAGCTTGGTTGGTCATACAGCCTGTTTACGCCCGGTTGTCGATCGCCTCATCCCGAAACTTGCGATCAAAGCGAAG
GGAGGTCAAACACAGCGTCG

Downstream 100 bases:

>100_bases
TGGAACAGGCACTGGTCTTCGCATCGATTGTCTTGGGCGTTGCTGTGGCATTCGAACTCGGCAATCTCGATCGGGTGCTG
CGGTCGAAGCGCGTAAAGTG

Product: putative protease

Products: NA

Alternate protein names: Protease; S1/S6 Family Peptidase; Serine Protease; Protein Kinase; Periplasmic Serine Proteinase; Forkhead-Associated Protein

Number of amino acids: Translated: 516; Mature: 516

Protein sequence:

>516_residues
MIRLLTLFAVLLGLALPHPALADPADIQAAARGVVRVVIIGSDGERVYPISHGSGFAVAPTRIVTNAHVVREAAQDDSLR
IGIVPSDGDDASYARIVRIAPAKDLALLEITGGELRLPPLTLAGSRERDAAEVISVGYPMNVDRAQGLEIDDIFRPQPTV
NSRGYISGSRPSTQFDTILHTAPIARGNSGGPLLDQCGRVLGVNSFGADGEGADGEFYFAVSNRELIPFLRASDVTPRTN
GQPCRSIAELDAQERERAAQEQALVRQEIAARATAERERRDRAQLEAELQVQESRENQMAMALIALLIGVGGGYATYLAW
GREDGERQRMIAGTIAGVGLIAALALWFTRPGLDAIDRKVAAAMAEGDENGDPDGTALASPGNASLTCRLVPERSRITGA
PAETVEFDWAENGCVNGRTQYGFQSGEWSRVFVPNDEAAVAINRYDPETRTYRTDRYLLTASAMRAARQAREAYTPPACT
VDGAAGQLGDLQSAVTSQLPERPNERLVYRCEVKDR

Sequences:

>Translated_516_residues
MIRLLTLFAVLLGLALPHPALADPADIQAAARGVVRVVIIGSDGERVYPISHGSGFAVAPTRIVTNAHVVREAAQDDSLR
IGIVPSDGDDASYARIVRIAPAKDLALLEITGGELRLPPLTLAGSRERDAAEVISVGYPMNVDRAQGLEIDDIFRPQPTV
NSRGYISGSRPSTQFDTILHTAPIARGNSGGPLLDQCGRVLGVNSFGADGEGADGEFYFAVSNRELIPFLRASDVTPRTN
GQPCRSIAELDAQERERAAQEQALVRQEIAARATAERERRDRAQLEAELQVQESRENQMAMALIALLIGVGGGYATYLAW
GREDGERQRMIAGTIAGVGLIAALALWFTRPGLDAIDRKVAAAMAEGDENGDPDGTALASPGNASLTCRLVPERSRITGA
PAETVEFDWAENGCVNGRTQYGFQSGEWSRVFVPNDEAAVAINRYDPETRTYRTDRYLLTASAMRAARQAREAYTPPACT
VDGAAGQLGDLQSAVTSQLPERPNERLVYRCEVKDR
>Mature_516_residues
MIRLLTLFAVLLGLALPHPALADPADIQAAARGVVRVVIIGSDGERVYPISHGSGFAVAPTRIVTNAHVVREAAQDDSLR
IGIVPSDGDDASYARIVRIAPAKDLALLEITGGELRLPPLTLAGSRERDAAEVISVGYPMNVDRAQGLEIDDIFRPQPTV
NSRGYISGSRPSTQFDTILHTAPIARGNSGGPLLDQCGRVLGVNSFGADGEGADGEFYFAVSNRELIPFLRASDVTPRTN
GQPCRSIAELDAQERERAAQEQALVRQEIAARATAERERRDRAQLEAELQVQESRENQMAMALIALLIGVGGGYATYLAW
GREDGERQRMIAGTIAGVGLIAALALWFTRPGLDAIDRKVAAAMAEGDENGDPDGTALASPGNASLTCRLVPERSRITGA
PAETVEFDWAENGCVNGRTQYGFQSGEWSRVFVPNDEAAVAINRYDPETRTYRTDRYLLTASAMRAARQAREAYTPPACT
VDGAAGQLGDLQSAVTSQLPERPNERLVYRCEVKDR

Specific function: Unknown

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.21.- [C]

Molecular weight: Translated: 55517; Mature: 55517

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRLLTLFAVLLGLALPHPALADPADIQAAARGVVRVVIIGSDGERVYPISHGSGFAVAP
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCEECC
TRIVTNAHVVREAAQDDSLRIGIVPSDGDDASYARIVRIAPAKDLALLEITGGELRLPPL
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCEEECCCE
TLAGSRERDAAEVISVGYPMNVDRAQGLEIDDIFRPQPTVNSRGYISGSRPSTQFDTILH
EECCCCCCCHHHHHCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCEECCCCCCCHHHHHHH
TAPIARGNSGGPLLDQCGRVLGVNSFGADGEGADGEFYFAVSNRELIPFLRASDVTPRTN
HCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCEECEECCCCCCCCCC
GQPCRSIAELDAQERERAAQEQALVRQEIAARATAERERRDRAQLEAELQVQESRENQMA
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALIALLIGVGGGYATYLAWGREDGERQRMIAGTIAGVGLIAALALWFTRPGLDAIDRKV
HHHHHHHHHCCCCCEEHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AAAMAEGDENGDPDGTALASPGNASLTCRLVPERSRITGAPAETVEFDWAENGCVNGRTQ
HHHHHCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCC
YGFQSGEWSRVFVPNDEAAVAINRYDPETRTYRTDRYLLTASAMRAARQAREAYTPPACT
CCCCCCCEEEEEECCCCCEEEEECCCCCCCEEECCEEEEEHHHHHHHHHHHHHCCCCCCE
VDGAAGQLGDLQSAVTSQLPERPNERLVYRCEVKDR
ECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCC
>Mature Secondary Structure
MIRLLTLFAVLLGLALPHPALADPADIQAAARGVVRVVIIGSDGERVYPISHGSGFAVAP
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCEEEEEEECCCCCEEEEEECCCCCEECC
TRIVTNAHVVREAAQDDSLRIGIVPSDGDDASYARIVRIAPAKDLALLEITGGELRLPPL
HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCEEECCCE
TLAGSRERDAAEVISVGYPMNVDRAQGLEIDDIFRPQPTVNSRGYISGSRPSTQFDTILH
EECCCCCCCHHHHHCCCCCCCCCHHCCCCHHHCCCCCCCCCCCCEECCCCCCCHHHHHHH
TAPIARGNSGGPLLDQCGRVLGVNSFGADGEGADGEFYFAVSNRELIPFLRASDVTPRTN
HCCCCCCCCCCCHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCEECEECCCCCCCCCC
GQPCRSIAELDAQERERAAQEQALVRQEIAARATAERERRDRAQLEAELQVQESRENQMA
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MALIALLIGVGGGYATYLAWGREDGERQRMIAGTIAGVGLIAALALWFTRPGLDAIDRKV
HHHHHHHHHCCCCCEEHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
AAAMAEGDENGDPDGTALASPGNASLTCRLVPERSRITGAPAETVEFDWAENGCVNGRTQ
HHHHHCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCC
YGFQSGEWSRVFVPNDEAAVAINRYDPETRTYRTDRYLLTASAMRAARQAREAYTPPACT
CCCCCCCEEEEEECCCCCEEEEECCCCCCCEEECCEEEEEHHHHHHHHHHHHHCCCCCCE
VDGAAGQLGDLQSAVTSQLPERPNERLVYRCEVKDR
ECCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA