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The map label for this gene is yhcM [H]

Identifier: 85374188

GI number: 85374188

Start: 1408879

End: 1410009

Strand: Direct

Name: yhcM [H]

Synonym: ELI_06805

Alternate gene names: 85374188

Gene position: 1408879-1410009 (Clockwise)

Preceding gene: 85374187

Following gene: 85374202

Centisome position: 46.16

GC content: 65.69

Gene sequence:

>1131_bases
ATGAGCGGTATTCTCGCACGATACGAGAGCCTGGTCGCTGCCGGCGAACTGAAGCCGGACGATGAGCAGGCCGCGGTCGC
GGCGCGGCTCGAGAGGCTGCAAAGGGAGCTGGAGGAGACACCCAAGCGCGGTTCGATCCTGTGGCGCGCGCTCAGGGGCA
AGCCCGAGGCGCCCGAAGGCGTGTACATGTGGGGCGGCGTGGGGCGCGGGAAGTCGATGCTGATGGACCTGTTCCACGAT
ACCTTGTCCATCAGCCGGAAGCGCCGTGCACATTTCCATGCCTTCATGCAGGATGTCCACGCGCTGTTACGGGAGGAGCG
AAAGAAGGAGAGCGGCGACCCGATCCCGCCCGTAGCGGCGCAACTGGCGGAGAACGTGCGCTGCCTCGCCTTCGACGAGA
TGGTCGTGAACAATTCCGCCGATGCCATGATCATGAGCCGGCTGTTCCGCGCACTGATCGTCGACGAAGGGGTGGTGATC
GTGACCACCAGCAACCGCCCTCCCCGCGATCTCTACAAGGACGGGCTCAACCGCGAGCATTTCCTGCCCTTCATCGAGCT
GATCGAAGACAAACTCGATGTCCTGCCTCTCAACGGCCCGACCGACTACCGGATGGACCGGCTGGGCGATCTTTCCACCT
GGCACACCCCGCTCGGCGAGGCGGCCACGGCGCAGGTGCGCGAGGCGTTCTTCCGCCTGACCGACTACAAGCCCGAAGAC
GCCGCCAACGTGCCCAGCGCCGAGCTGGACGTCGGCGGCGGACGGACGCTGCACGTGCCCAAGAGCCTCAAGGGTGTCGG
GGTCTTCAGTTTCAAGCGGCTATGCGGCCAGCCGCGCGGTGCGCCGGACTATCTCGCCATCGCCCGCGCCTATCACACGG
TCATCCTGGTCGGCATTCCGCAGATGGGGCCGGAGGACCGCAACGAGGCGGCGCGCTTCGTCACGCTGATCGATGCGCTG
TACGAGTACCGGGTCAAGCTGTTCGTCACGGCTGCCGCCGAACCCGCCGAACTCTACCAGGCGGGCGACGGGAGCTTCGA
GTTCGAACGCACCGTCAGCCGCCTGATGGAGATGCGCAGCGACGAATACATGGCGCTCGGCCATGGCGAAGACGAAGTGG
CGAGAGCTTAG

Upstream 100 bases:

>100_bases
GCAAGCTCGTCTTCGTGCGCGGCGAGGTGGTGCAGGAGGACGACGTTATCTGTGCCTACAGCGGCATCATCCGCAAGTTC
CCGCCGCGCAAGCTCGATTG

Downstream 100 bases:

>100_bases
GCGGCCTTGCGCGCGCCCCGTTCCTGCGCGGAGGCGAGCCGGTCCATCAGTTTGAGATCCTGCTCACGCAATTGCAGCGC
CGCATCGGCCCAAAGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 375

Protein sequence:

>376_residues
MSGILARYESLVAAGELKPDDEQAAVAARLERLQRELEETPKRGSILWRALRGKPEAPEGVYMWGGVGRGKSMLMDLFHD
TLSISRKRRAHFHAFMQDVHALLREERKKESGDPIPPVAAQLAENVRCLAFDEMVVNNSADAMIMSRLFRALIVDEGVVI
VTTSNRPPRDLYKDGLNREHFLPFIELIEDKLDVLPLNGPTDYRMDRLGDLSTWHTPLGEAATAQVREAFFRLTDYKPED
AANVPSAELDVGGGRTLHVPKSLKGVGVFSFKRLCGQPRGAPDYLAIARAYHTVILVGIPQMGPEDRNEAARFVTLIDAL
YEYRVKLFVTAAAEPAELYQAGDGSFEFERTVSRLMEMRSDEYMALGHGEDEVARA

Sequences:

>Translated_376_residues
MSGILARYESLVAAGELKPDDEQAAVAARLERLQRELEETPKRGSILWRALRGKPEAPEGVYMWGGVGRGKSMLMDLFHD
TLSISRKRRAHFHAFMQDVHALLREERKKESGDPIPPVAAQLAENVRCLAFDEMVVNNSADAMIMSRLFRALIVDEGVVI
VTTSNRPPRDLYKDGLNREHFLPFIELIEDKLDVLPLNGPTDYRMDRLGDLSTWHTPLGEAATAQVREAFFRLTDYKPED
AANVPSAELDVGGGRTLHVPKSLKGVGVFSFKRLCGQPRGAPDYLAIARAYHTVILVGIPQMGPEDRNEAARFVTLIDAL
YEYRVKLFVTAAAEPAELYQAGDGSFEFERTVSRLMEMRSDEYMALGHGEDEVARA
>Mature_375_residues
SGILARYESLVAAGELKPDDEQAAVAARLERLQRELEETPKRGSILWRALRGKPEAPEGVYMWGGVGRGKSMLMDLFHDT
LSISRKRRAHFHAFMQDVHALLREERKKESGDPIPPVAAQLAENVRCLAFDEMVVNNSADAMIMSRLFRALIVDEGVVIV
TTSNRPPRDLYKDGLNREHFLPFIELIEDKLDVLPLNGPTDYRMDRLGDLSTWHTPLGEAATAQVREAFFRLTDYKPEDA
ANVPSAELDVGGGRTLHVPKSLKGVGVFSFKRLCGQPRGAPDYLAIARAYHTVILVGIPQMGPEDRNEAARFVTLIDALY
EYRVKLFVTAAAEPAELYQAGDGSFEFERTVSRLMEMRSDEYMALGHGEDEVARA

Specific function: Unknown

COG id: COG1485

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AFG1 ATPase family [H]

Homologues:

Organism=Homo sapiens, GI21918872, Length=407, Percent_Identity=32.6781326781327, Blast_Score=227, Evalue=1e-59,
Organism=Escherichia coli, GI1789627, Length=380, Percent_Identity=37.6315789473684, Blast_Score=230, Evalue=1e-61,
Organism=Caenorhabditis elegans, GI17505769, Length=413, Percent_Identity=35.3510895883777, Blast_Score=238, Evalue=4e-63,
Organism=Saccharomyces cerevisiae, GI6320783, Length=396, Percent_Identity=35.1010101010101, Blast_Score=195, Evalue=9e-51,
Organism=Drosophila melanogaster, GI20129913, Length=430, Percent_Identity=30.2325581395349, Blast_Score=185, Evalue=5e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005654 [H]

Pfam domain/function: PF03969 AFG1_ATPase [H]

EC number: NA

Molecular weight: Translated: 42028; Mature: 41896

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGILARYESLVAAGELKPDDEQAAVAARLERLQRELEETPKRGSILWRALRGKPEAPEG
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
VYMWGGVGRGKSMLMDLFHDTLSISRKRRAHFHAFMQDVHALLREERKKESGDPIPPVAA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
QLAENVRCLAFDEMVVNNSADAMIMSRLFRALIVDEGVVIVTTSNRPPRDLYKDGLNREH
HHHCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCHHH
FLPFIELIEDKLDVLPLNGPTDYRMDRLGDLSTWHTPLGEAATAQVREAFFRLTDYKPED
HHHHHHHHHHHHCEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
AANVPSAELDVGGGRTLHVPKSLKGVGVFSFKRLCGQPRGAPDYLAIARAYHTVILVGIP
CCCCCCCEEECCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEECC
QMGPEDRNEAARFVTLIDALYEYRVKLFVTAAAEPAELYQAGDGSFEFERTVSRLMEMRS
CCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHCC
DEYMALGHGEDEVARA
CCEEEECCCCHHHHCC
>Mature Secondary Structure 
SGILARYESLVAAGELKPDDEQAAVAARLERLQRELEETPKRGSILWRALRGKPEAPEG
CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCC
VYMWGGVGRGKSMLMDLFHDTLSISRKRRAHFHAFMQDVHALLREERKKESGDPIPPVAA
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
QLAENVRCLAFDEMVVNNSADAMIMSRLFRALIVDEGVVIVTTSNRPPRDLYKDGLNREH
HHHCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHCCCCHHH
FLPFIELIEDKLDVLPLNGPTDYRMDRLGDLSTWHTPLGEAATAQVREAFFRLTDYKPED
HHHHHHHHHHHHCEEECCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
AANVPSAELDVGGGRTLHVPKSLKGVGVFSFKRLCGQPRGAPDYLAIARAYHTVILVGIP
CCCCCCCEEECCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHEEEEEECC
QMGPEDRNEAARFVTLIDALYEYRVKLFVTAAAEPAELYQAGDGSFEFERTVSRLMEMRS
CCCCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHCC
DEYMALGHGEDEVARA
CCEEEECCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]