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The map label for this gene is hspD [H]

Identifier: 85374118

GI number: 85374118

Start: 1339672

End: 1340148

Strand: Direct

Name: hspD [H]

Synonym: ELI_06455

Alternate gene names: 85374118

Gene position: 1339672-1340148 (Clockwise)

Preceding gene: 85374113

Following gene: 85374123

Centisome position: 43.89

GC content: 59.75

Gene sequence:

>477_bases
ATGTCACGTCTTGATTTCACCCCCTATCGTCGCAGCACCGTCGGTTTCGACCGCCTGTTCGACATGCTGGAAAGCAATGT
TCGCCAGGGCGGCAGCGACAATTACCCGCCCTTCAACATCGAAAAGCGTGGCGATGACGAATATCGCATCACGCTCGCGA
TCGCAGGCTTCCGTCCGGAAGATCTCGATATTACCGCGCAGCAGAACCTGCTGACGGTGACCGGCAAGAAACGCGAGGAA
GCCGCAGACGGCGAGATGCTTCACGTCGGCATCGCCAACCGCGGGTTCGAACGTCGCTTCGAACTGGCCGACTACGTACG
CGTCGCCAATGCCGACCTGCGGGACGGCCTGCTGGTGATCGATCTCGTGCGCGAAGTGCCCGAGGCGATGAAGCCGAAGA
AGATCCTGATCGGCGACCAGAAGACCCTCAACGTGGTCGATGGCGACAAGAAGGACGACGAAGCTAACGCTGCCTAA

Upstream 100 bases:

>100_bases
CAGGTTTGGCGCGATGCCATATCGGATCGTGTCATTTGACCAACGGAATGCCGCGGATGCGGGTTCCTTGCAATTGAATT
GCTCATTGGAGGATTTGAAT

Downstream 100 bases:

>100_bases
CCGGCAGAAACGGTGAAATGATCGGGGCCTGCCCTTCGCTGGGCGGGCCCCTTTTCGTTTCGCGCAACGGAAACATCGGT
CTGAATAATATGGGGCGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MSRLDFTPYRRSTVGFDRLFDMLESNVRQGGSDNYPPFNIEKRGDDEYRITLAIAGFRPEDLDITAQQNLLTVTGKKREE
AADGEMLHVGIANRGFERRFELADYVRVANADLRDGLLVIDLVREVPEAMKPKKILIGDQKTLNVVDGDKKDDEANAA

Sequences:

>Translated_158_residues
MSRLDFTPYRRSTVGFDRLFDMLESNVRQGGSDNYPPFNIEKRGDDEYRITLAIAGFRPEDLDITAQQNLLTVTGKKREE
AADGEMLHVGIANRGFERRFELADYVRVANADLRDGLLVIDLVREVPEAMKPKKILIGDQKTLNVVDGDKKDDEANAA
>Mature_157_residues
SRLDFTPYRRSTVGFDRLFDMLESNVRQGGSDNYPPFNIEKRGDDEYRITLAIAGFRPEDLDITAQQNLLTVTGKKREEA
ADGEMLHVGIANRGFERRFELADYVRVANADLRDGLLVIDLVREVPEAMKPKKILIGDQKTLNVVDGDKKDDEANAA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=137, Percent_Identity=48.1751824817518, Blast_Score=132, Evalue=1e-32,
Organism=Escherichia coli, GI87082316, Length=144, Percent_Identity=40.2777777777778, Blast_Score=115, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17846; Mature: 17715

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLDFTPYRRSTVGFDRLFDMLESNVRQGGSDNYPPFNIEKRGDDEYRITLAIAGFRPE
CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
DLDITAQQNLLTVTGKKREEAADGEMLHVGIANRGFERRFELADYVRVANADLRDGLLVI
CCCEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
DLVREVPEAMKPKKILIGDQKTLNVVDGDKKDDEANAA
HHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SRLDFTPYRRSTVGFDRLFDMLESNVRQGGSDNYPPFNIEKRGDDEYRITLAIAGFRPE
CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC
DLDITAQQNLLTVTGKKREEAADGEMLHVGIANRGFERRFELADYVRVANADLRDGLLVI
CCCEECCCCEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
DLVREVPEAMKPKKILIGDQKTLNVVDGDKKDDEANAA
HHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12597275 [H]