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The map label for this gene is ssb [H]

Identifier: 85372966

GI number: 85372966

Start: 173203

End: 173601

Strand: Direct

Name: ssb [H]

Synonym: ELI_00695

Alternate gene names: 85372966

Gene position: 173203-173601 (Clockwise)

Preceding gene: 85372965

Following gene: 85372968

Centisome position: 5.67

GC content: 62.66

Gene sequence:

>399_bases
ATGACCAATATCGCAATTCTCACCGGCCGCATCTCCCGCGATCCGGACACCCGCGAGACCAAGGGTGGCACAAATGTCAC
CGGGATCACCGTCGTCACCGATCGCCCCGCACGCGACAAGGACGGCAAGACCTACAAGGATGAGAACGGCTACACCGCCA
AGGAAAGCGAGTTCCACCGGGTGACCTGCTTCAACGGCCTCGCCAAGACCGTCGGGCAGTACTGCTCCAAGGGCCAGCTG
GTATCGGTCCAGGGCCGCATCCACTACACCCAGTGGGAGGACAAGGACGGGGTCACGCGCTACGGCACCGAAATCCTCGC
CGACAAGGTCGACTTCCTTTCTCGCGGCAACGGCTCCGGCGAAGAAGGCGACAACACCGACGCTCCCGAGATCGACTGA

Upstream 100 bases:

>100_bases
GCCCTTCAGGCCTGCGGTGCAGTCCTCCCATGCCCTGATTCTTCTGGATGTTCGCAAGCCGGAGATGGTCTCCGGTTTGA
GGAACTGAAGGACAATCACC

Downstream 100 bases:

>100_bases
CCTCTCCCGTCGATCTCCATCCGAAAGGGGTCCTGTCCCAGCGGACAGGGCCCCTTTCTCATGTTTATTCCGATGGCGTC
TGCCCGGATCGGGAAGACGA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MTNIAILTGRISRDPDTRETKGGTNVTGITVVTDRPARDKDGKTYKDENGYTAKESEFHRVTCFNGLAKTVGQYCSKGQL
VSVQGRIHYTQWEDKDGVTRYGTEILADKVDFLSRGNGSGEEGDNTDAPEID

Sequences:

>Translated_132_residues
MTNIAILTGRISRDPDTRETKGGTNVTGITVVTDRPARDKDGKTYKDENGYTAKESEFHRVTCFNGLAKTVGQYCSKGQL
VSVQGRIHYTQWEDKDGVTRYGTEILADKVDFLSRGNGSGEEGDNTDAPEID
>Mature_131_residues
TNIAILTGRISRDPDTRETKGGTNVTGITVVTDRPARDKDGKTYKDENGYTAKESEFHRVTCFNGLAKTVGQYCSKGQLV
SVQGRIHYTQWEDKDGVTRYGTEILADKVDFLSRGNGSGEEGDNTDAPEID

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=109, Percent_Identity=33.9449541284404, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790494, Length=107, Percent_Identity=32.7102803738318, Blast_Score=68, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 14509; Mature: 14378

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNIAILTGRISRDPDTRETKGGTNVTGITVVTDRPARDKDGKTYKDENGYTAKESEFHR
CCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEE
VTCFNGLAKTVGQYCSKGQLVSVQGRIHYTQWEDKDGVTRYGTEILADKVDFLSRGNGSG
EEHHHHHHHHHHHHHCCCCEEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EEGDNTDAPEID
CCCCCCCCCCCC
>Mature Secondary Structure 
TNIAILTGRISRDPDTRETKGGTNVTGITVVTDRPARDKDGKTYKDENGYTAKESEFHR
CCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCCCCEE
VTCFNGLAKTVGQYCSKGQLVSVQGRIHYTQWEDKDGVTRYGTEILADKVDFLSRGNGSG
EEHHHHHHHHHHHHHCCCCEEEEECEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
EEGDNTDAPEID
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]