Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625571
Identifier: 84625571
GI number: 84625571
Start: 4414670
End: 4415389
Strand: Reverse
Name: 84625571
Synonym: XOO_3915
Alternate gene names: NA
Gene position: 4415389-4414670 (Counterclockwise)
Preceding gene: 84625573
Following gene: 84625570
Centisome position: 89.38
GC content: 65.56
Gene sequence:
>720_bases ATGACGCGCAAGCACACGGCGGTGTTCGGCTGGTGTCTGGCGCTGCTGGTGAGCGCGGGTTTCGCGACGCTTGGGCACTG GCAATTGCAGCGCATGCATAGCAAGCAGGCCTTGCTCGACCGCGCTGCCCATGTGCGCGATACCACGCTGTCTTTGGTGC AAGCGCTGGCGACGCCGCACGATGTGGCATGGGTGCGTGGGTCAGTGCGTTTTTTGCCGCAACTGGTCTTGCTGGATAAT CAGCTGCATGACGGGCGTGCCGGTGTGCGCGTGTATCAACTGGCGGCGCCTGATGGCGTGCCGGGAAGCGTCCTGGTCGA TCTGGGCTGGTTGCCATTACCGGCTGATCGGAAGTTGCCCCGCATTGTTGCGCTAACTGGCATGCAGACCGTGCAGGGAC TCTTGAGCGCACCGCCGTCGGCGGGGCTGGCGATCGGTCCTGCATTGGCAGCGGGGGTCGCTCCGCAGACGTGGTTGGCC ACGCGTCTGGATAGGGAGGCTTTACGCAGCACGCTGGGCAGGCGCGACATTTCGTCGCAGGTGTTACGCCTGGACCCTGC ATTGCCGGTTGGTTACGTACGCGATCTGGAAATGCTGCCAAACACGCTGCCCCCCGCGCGGCACTTGGGTTACGCGGTGC AATGGTTCGGGCTGGCCGCCGCGGTCCTGGCGACCGCGATGCTGCTGACATGGCGTGCGCGCCGCCGCCGCGGGCACTGA
Upstream 100 bases:
>100_bases GGAAGGCGACAATCAGCAGCGTCTTGAGCGAATCGTTCACAACAGCCCCGGGTGCAGTCGGCGTGGTGATGGCATTGCAC GCCTTTTTGCGTCGCTTGTC
Downstream 100 bases:
>100_bases CGCCTGCGGCATGAGAAAATCGCCGGCATGACCTCCTCCACATCGGCCACGCCGCAATCGGTCAAACGCGGCCGCAGGAT ACTGATTGCCCTGGCGGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPHDVAWVRGSVRFLPQLVLLDN QLHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLPRIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLA TRLDREALRSTLGRRDISSQVLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH
Sequences:
>Translated_239_residues MTRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPHDVAWVRGSVRFLPQLVLLDN QLHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLPRIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLA TRLDREALRSTLGRRDISSQVLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH >Mature_238_residues TRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPHDVAWVRGSVRFLPQLVLLDNQ LHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLPRIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLAT RLDREALRSTLGRRDISSQVLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH
Specific function: Unknown
COG id: COG3346
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25969; Mature: 25838
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: PS50895 SURF1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DVAWVRGSVRFLPQLVLLDNQLHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC RIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLATRLDREALRSTLGRRDISSQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH VLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRKHTAVFGWCLALLVSAGFATLGHWQLQRMHSKQALLDRAAHVRDTTLSLVQALATPH CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DVAWVRGSVRFLPQLVLLDNQLHDGRAGVRVYQLAAPDGVPGSVLVDLGWLPLPADRKLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCCC RIVALTGMQTVQGLLSAPPSAGLAIGPALAAGVAPQTWLATRLDREALRSTLGRRDISSQ HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHH VLRLDPALPVGYVRDLEMLPNTLPPARHLGYAVQWFGLAAAVLATAMLLTWRARRRRGH HHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA