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The map label for this gene is 84625547

Identifier: 84625547

GI number: 84625547

Start: 4389720

End: 4390181

Strand: Reverse

Name: 84625547

Synonym: XOO_3890

Alternate gene names: NA

Gene position: 4390181-4389720 (Counterclockwise)

Preceding gene: 84625550

Following gene: 84625542

Centisome position: 88.87

GC content: 57.36

Gene sequence:

>462_bases
ATGGAGATCACGCCAGCACAATTTGCACTCATCGAGCATTGCCTACCTTTGCAACGCGGCAATGTCAGCATGACCAACCT
GCAGGTAGTCAACGCCCTTCTTTACGTCGCAGAGCATGGCTGCAAATGGCGCGGTCTGCCCGAGCGCTTTGGCAACTGGC
ATACGGTGTACACGCGCATTAACCGTTGGGCCAAGTCCGGTGTGCTGGACCGGATGTTCGCCCAATTGCAGACCTGCCAG
ATCGTGCGCATCAAAATCGAAGCGGTCTCGCTGGACTCCACCAGCATCAAGGTGCATCCGGATGGCACTGGCGCATTAAA
AAACCTGATTAGCCCCATCCCTCAGCCATGGAAGTTGCTTGCCATACGCAAAACGCGCTCTGGGCAAGGTGTGCAGCGCA
GCAGTGCCGTCGCCAGCCGCGGCAGCATCTGTTTCAGGTCGAATCGGCGGTTGAAGCGATAG

Upstream 100 bases:

>100_bases
CGCGCCCATCTGACAGCTCTCGCTACGTTTTGTTAGCCGCTCTTAGTGCGCGTACTAGGGCCTGTTAACATTAATGTCTC
GAGCGATTAAACTATTGGGC

Downstream 100 bases:

>100_bases
GCCGCCTCGGCCAGGTAGCGCCTTGCATACTTGGCCTGGCCCACCGCATGGTAGGTCCCGCTGATGGCGCGTTTGACATT
GCCCAGCACCACATTCAACC

Product: ISXoo12 transposase

Products: NA

Alternate protein names: ISXoo12 Transposase; IS4 Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase Related Protein; Transposase-Like Protein; ISHde2 Transposase OrfA; ISBm1 Transposase; Transposase And Inactivated Derivative; IS5 Family Transposase; Transposase Fragment

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRWAKSGVLDRMFAQLQTCQ
IVRIKIEAVSLDSTSIKVHPDGTGALKNLISPIPQPWKLLAIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR

Sequences:

>Translated_153_residues
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRWAKSGVLDRMFAQLQTCQ
IVRIKIEAVSLDSTSIKVHPDGTGALKNLISPIPQPWKLLAIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR
>Mature_153_residues
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRINRWAKSGVLDRMFAQLQTCQ
IVRIKIEAVSLDSTSIKVHPDGTGALKNLISPIPQPWKLLAIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17262; Mature: 17262

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRI
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHH
NRWAKSGVLDRMFAQLQTCQIVRIKIEAVSLDSTSIKVHPDGTGALKNLISPIPQPWKLL
HHHHHCCHHHHHHHHHHHCEEEEEEEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEE
AIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR
EEEECCCCCCCCHHHHHHHCCCEEEECCCCCCC
>Mature Secondary Structure
MEITPAQFALIEHCLPLQRGNVSMTNLQVVNALLYVAEHGCKWRGLPERFGNWHTVYTRI
CCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHH
NRWAKSGVLDRMFAQLQTCQIVRIKIEAVSLDSTSIKVHPDGTGALKNLISPIPQPWKLL
HHHHHCCHHHHHHHHHHHCEEEEEEEEEEEECCCEEEECCCCCHHHHHHHHCCCCCCEEE
AIRKTRSGQGVQRSSAVASRGSICFRSNRRLKR
EEEECCCCCCCCHHHHHHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA