Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625527
Identifier: 84625527
GI number: 84625527
Start: 4372912
End: 4373664
Strand: Reverse
Name: 84625527
Synonym: XOO_3870
Alternate gene names: NA
Gene position: 4373664-4372912 (Counterclockwise)
Preceding gene: 84625528
Following gene: 84625524
Centisome position: 88.53
GC content: 63.21
Gene sequence:
>753_bases ATGAGCGCACTTGCACAACGCGACGGCCAAGCGATCCAACTGGTTGGGTTCGACGGCGACGATACGCTTTGGAAAAGCGA GGACTATTACCGCACCGCAGAAGCGGATTTCGAAGCGATTCTGTCCGGTTATCTGGATCTGGGCGACAGCCGCATGCAGC AGCATCTGCTGGCGGTGGAGCGGCGCAACCTCAAGGTGTTCGGTTACGGCGCCAAGGGCATGACGCTGTCGATGATCGAA ACCGCAATCGAACTGACCCAGGCGCGCATTGCGGCCCGCGATATCCAGCGCATCGTCGAAATCGGCCGTGCCACGCTGCA GCACCCGGTGGACGTGATTGCCGGTGTACGCCAGGCAGTCAGTGCGATTGCCGCCGATTACGCGGTGGTGCTGATCACCA AGGGCGACCTGTTTCACCAGGAGCAGAAGATCGAGCAGTCCGGCCTGGCCGATCTGTTCCCGCGGGTCGAAGTGGTATCT GAAAAAGATCCGCGGACATATGCGCGCGTGCTCGGTGAATTCGACTTGCCGGCGCGGCGATTCGTCATGATTGGTAATTC GCTGCGCTCGGACGTGGAACCGGTGCTGGCCATCGGCGGCTGGGGCATCTACACCCCGTACGCGGTGACCTGGGCGCACG AGCAGGAGCATGGTGTGGCCGCCGCCGAACCGCGCATGCGCGAAGTGCCCGCCGCCTCCGGCTGGCCGGCAGCAGTGCAT GCGTTGGATGCGTTGGCGCGGCAGCAGCGCTAA
Upstream 100 bases:
>100_bases CGCCTGTCGCGCGACGAATTCGCCATTTATCAACCTGGCCCGGGCGATGCCGCAGGCGACTGAGCACAGCGCCAGATCGG TGCGCTGCTAAACTGGTCAG
Downstream 100 bases:
>100_bases GGAAGGTCTGAACAACCCATCAAACCTCTAAAATTCCAGCTTCTTGCATTTCAATGACTGGAAAAATGCTGAGTCGGGTG CGATTTTTGCAACGTTCTGG
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: Haloacid Dehalogenase Domain Protein Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Hydrolase Haloacid Dehalogenase Family; Haloacid Dehydrogenase Hydrolase; Hydrolase Family Protein; Halogenase-Like Hydrolase; Haloacid Dehalogenase-Like Family Protein; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Family Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Hydrolase Haloacid Dehalogenase Family Protein; HAD Family Phosphatase; Hydrolase Of HAD Superfamily
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MSALAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKVFGYGAKGMTLSMIE TAIELTQARIAARDIQRIVEIGRATLQHPVDVIAGVRQAVSAIAADYAVVLITKGDLFHQEQKIEQSGLADLFPRVEVVS EKDPRTYARVLGEFDLPARRFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAAAEPRMREVPAASGWPAAVH ALDALARQQR
Sequences:
>Translated_250_residues MSALAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKVFGYGAKGMTLSMIE TAIELTQARIAARDIQRIVEIGRATLQHPVDVIAGVRQAVSAIAADYAVVLITKGDLFHQEQKIEQSGLADLFPRVEVVS EKDPRTYARVLGEFDLPARRFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAAAEPRMREVPAASGWPAAVH ALDALARQQR >Mature_249_residues SALAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVERRNLKVFGYGAKGMTLSMIET AIELTQARIAARDIQRIVEIGRATLQHPVDVIAGVRQAVSAIAADYAVVLITKGDLFHQEQKIEQSGLADLFPRVEVVSE KDPRTYARVLGEFDLPARRFVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAAAEPRMREVPAASGWPAAVHA LDALARQQR
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27587; Mature: 27455
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVE CCCCHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RRNLKVFGYGAKGMTLSMIETAIELTQARIAARDIQRIVEIGRATLQHPVDVIAGVRQAV HCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIAADYAVVLITKGDLFHQEQKIEQSGLADLFPRVEVVSEKDPRTYARVLGEFDLPARR HHHHHCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH FVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAAAEPRMREVPAASGWPAAVH HEEECCHHHHCCCHHEEECCCCCCCCEEEEECCCHHCCCCCCCCHHHHCCCCCCCHHHHH ALDALARQQR HHHHHHHCCC >Mature Secondary Structure SALAQRDGQAIQLVGFDGDDTLWKSEDYYRTAEADFEAILSGYLDLGDSRMQQHLLAVE CCCHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RRNLKVFGYGAKGMTLSMIETAIELTQARIAARDIQRIVEIGRATLQHPVDVIAGVRQAV HCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAIAADYAVVLITKGDLFHQEQKIEQSGLADLFPRVEVVSEKDPRTYARVLGEFDLPARR HHHHHCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHH FVMIGNSLRSDVEPVLAIGGWGIYTPYAVTWAHEQEHGVAAAEPRMREVPAASGWPAAVH HEEECCHHHHCCCHHEEECCCCCCCCEEEEECCCHHCCCCCCCCHHHHCCCCCCCHHHHH ALDALARQQR HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA