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The map label for this gene is 84625521

Identifier: 84625521

GI number: 84625521

Start: 4367979

End: 4368455

Strand: Reverse

Name: 84625521

Synonym: XOO_3864

Alternate gene names: NA

Gene position: 4368455-4367979 (Counterclockwise)

Preceding gene: 84625522

Following gene: 84625519

Centisome position: 88.43

GC content: 58.49

Gene sequence:

>477_bases
TTGATCGTGGACGCGCAGAGCGTGAAGAACAGTGATACAGCCGGCCAGAAAGGCTATGACGCGGGCAAGAAGGTATCGGG
GATCAAGCGCCACATCGCGGTGGATACGCAAGGCTTTCCACATGCCGTTGCGGTGACCACGGCGGAAGTCACCGATCGTC
AAGGTGCGCTGGAGGCATTGAAACGCTGCCGATCGGGTTTAGGTCGGGTGAAACGCCTGCTGTGCGACAGCGGCTACACC
GGAGATCCCTTCGCCGAGGACGTACAGGACATTCTGGGCAAGCATGTCACCGTACAGATTGCCAAGCGCAGCGAGCTGCA
TACCTTCAAGGTCATGCCCAAGCGCTGGAGTGTCGAACGCAGCTTTGCCTGGCTGGAGAAGAACCGGAGGCTATGGAAGA
ACTGCGAGCGAAGGCTCAATACCAGCTTGCAGTTCATCCATCTGGCGTTCCTGGCACTGCTGCTCAGGAGATCGTGA

Upstream 100 bases:

>100_bases
GAAGTGGACGATGAAGGAATAAGCCTGCTGGAGCGGGCGCTTAAAAAATCAGGTTGGCGCGGCCCGCGAGAAACAGGGGC
GCAAGGCCTGCAGCACGTTC

Downstream 100 bases:

>100_bases
ACAGGTTCTAAGGCGCAAACACAACCTTGCGATAGCCCTGCGCCACCCGCAGCAACGCGGTGGCCTTTGCTTTCCACTGC
GTGCTGCGCCGCTTTTGCGC

Product: ISXo3 transposase orfB

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; IS5 Family Transposase; Transposase IS5 Family Protein; Transposase Of; LOW QUALITY PROTEIN Transposase; Transposase And Inactivated Derivatives-Like Protein; Transposase-Like Protein; Isxo3 Transposase Protein; Transposase Fragment; ISXo3 Transposase ORF B; Transposase And Inactivated Derivatives; IS4 Insertion Sequence Transposase Protein; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase Is4 Family; IS Transposase; ISPsy19 Transposase; Transposase IS5 Family; Transposase Protein

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYT
GDPFAEDVQDILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNRRLWKNCERRLNTSLQFIHLAFLALLLRRS

Sequences:

>Translated_158_residues
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYT
GDPFAEDVQDILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNRRLWKNCERRLNTSLQFIHLAFLALLLRRS
>Mature_158_residues
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYT
GDPFAEDVQDILGKHVTVQIAKRSELHTFKVMPKRWSVERSFAWLEKNRRLWKNCERRLNTSLQFIHLAFLALLLRRS

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17819; Mature: 17819

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEHHHHHHHHHHHHHH
KRCRSGLGRVKRLLCDSGYTGDPFAEDVQDILGKHVTVQIAKRSELHTFKVMPKRWSVER
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHEEECCCHHCHHH
SFAWLEKNRRLWKNCERRLNTSLQFIHLAFLALLLRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEHHHHHHHHHHHHHH
KRCRSGLGRVKRLLCDSGYTGDPFAEDVQDILGKHVTVQIAKRSELHTFKVMPKRWSVER
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCHHEEECCCHHCHHH
SFAWLEKNRRLWKNCERRLNTSLQFIHLAFLALLLRRS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA