Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625345
Identifier: 84625345
GI number: 84625345
Start: 4162492
End: 4163607
Strand: Reverse
Name: 84625345
Synonym: XOO_3688
Alternate gene names: NA
Gene position: 4163607-4162492 (Counterclockwise)
Preceding gene: 84625346
Following gene: 84625344
Centisome position: 84.28
GC content: 58.87
Gene sequence:
>1116_bases ATGCGGCAGCGATGCAGCTCAACAACGCCTCGGCCAGCCATAGCCTGCAATACGACAAAGAACGCTATTTACAGCTGGAT TTCGATCATGCGGTGGAGCGGGGGCCATTCACCCAAATCCTCACCGGCACCAAGCTTACCAATCACGCCACCGGGCAATC GTCCTATCGCTGTACCTGGACCCCGAACGATGGCAGCACGCTGGCGGCATTCTCGCCGGGCGCCATGCCGTCGGGCTATC TGGATGGGCTATCTATCGACCAGCGCGGAGATGCAAGGCTGGTCGACCATCGATCGCGGTGCGATCAGTCGGTATATCAA CGGATTGGAAGGCGATGACGGGTTGCCCATCAGCTATGCCGCCAACTACAGCATCGAGGAGCAGAACCGTGCGTGGTTCC TGCAGGGCAACTTCTCCGGCGGGCGATATCGCGGCAACATCGGTGTGCGTTATGTGCATTCGCGCGATTCCACCGATGGC TACAGCTATGCACCGGGCGGCGGCTACAGGCCGGTGAATTTCCTGAGTAGCTACGGCAAATGGCTGCCCTCGTTCAATAT TGCCTACGACCTGCGCGACGACCTGATGCTGCGCTTTGCTTCCTCCAAGTTGATCGCGCGGTCGCGCTACACCAACATGA CCCCGTATGTGGCAGCCGACGACACCACGCTGACCGCGTCGACAGGTAACCCGCGTCTGAGCCCGTACGAATCGACCAAC CTCGGCGCATCGCTGGAGTGGTATTTCTCCGACAGCAGCTTGCTCAGTGGCGAATTCTTCTCGCGCGATATCTCCAACTA CATCCTCACCACCGTGCAGGATCGCGTCTTCTCCAACAACGCTACTGGCGGGGCGAGCACGTATCAGACATCGGTGCCCA GCAATGCTGGCGATGCCAAGGTGCGCGGTGTCGCGCTCAATCTGCAGCACAATTTCGGCAATGGCTTTGGCGTGGTGGCC AACGACACCTATTCCGATTCCAAGGCCGATGGCGACTACAGGGCGGTCTCAAGAGTCAAGTGCAACACCTCGAGAGACCT GCTGTTAGCGCAACGTATGGACGGACAGCCCAGCAGGCCATTGATTGTGCAAAAGTTACGTGAGCCAGTGTTTTGA
Upstream 100 bases:
>100_bases CCGAGCGCATCTACGGCATCCAGATTCCGCAATCTGGCTGGCTATAACTACAACATCGACGGGCGCCGGACCGCGATGGA CTACAGCACCGATCCCACCA
Downstream 100 bases:
>100_bases CAGAAAACGCGGGTCTGCAGTGGAGAAAAGTGTTGCACATGGAACTTGAGTCGGCCCAGCCTGCCGTACAACTCTCGCAA TGCGTACAACATCAGCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Subfamily; NB-Dependent Receptor Plug; Nb-Dependent Outer Membrane Receptor Protein; NB-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; Outer Membrane Insertion C-Terminal Signal; NB-Dependent Receptor Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Fe Receptor Protein; NB-Dependent Receptor-Like Protein; NB Dependent Receptor For Iron Chelates; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; NB-Dependent Outer Membrane Ferripyoverdine Receptor; NB-Dependent Receptor Subfamily Protein; Exported nB-Dependent Receptor; Nucleoside Diphosphate Kinase; Peptidase; NB Dependent Receptor Protein; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MRQRCSSTTPRPAIACNTTKNAIYSWISIMRWSGGHSPKSSPAPSLPITPPGNRPIAVPGPRTMAARWRHSRRAPCRRAI WMGYLSTSAEMQGWSTIDRGAISRYINGLEGDDGLPISYAANYSIEEQNRAWFLQGNFSGGRYRGNIGVRYVHSRDSTDG YSYAPGGGYRPVNFLSSYGKWLPSFNIAYDLRDDLMLRFASSKLIARSRYTNMTPYVAADDTTLTASTGNPRLSPYESTN LGASLEWYFSDSSLLSGEFFSRDISNYILTTVQDRVFSNNATGGASTYQTSVPSNAGDAKVRGVALNLQHNFGNGFGVVA NDTYSDSKADGDYRAVSRVKCNTSRDLLLAQRMDGQPSRPLIVQKLREPVF
Sequences:
>Translated_371_residues MRQRCSSTTPRPAIACNTTKNAIYSWISIMRWSGGHSPKSSPAPSLPITPPGNRPIAVPGPRTMAARWRHSRRAPCRRAI WMGYLSTSAEMQGWSTIDRGAISRYINGLEGDDGLPISYAANYSIEEQNRAWFLQGNFSGGRYRGNIGVRYVHSRDSTDG YSYAPGGGYRPVNFLSSYGKWLPSFNIAYDLRDDLMLRFASSKLIARSRYTNMTPYVAADDTTLTASTGNPRLSPYESTN LGASLEWYFSDSSLLSGEFFSRDISNYILTTVQDRVFSNNATGGASTYQTSVPSNAGDAKVRGVALNLQHNFGNGFGVVA NDTYSDSKADGDYRAVSRVKCNTSRDLLLAQRMDGQPSRPLIVQKLREPVF >Mature_371_residues MRQRCSSTTPRPAIACNTTKNAIYSWISIMRWSGGHSPKSSPAPSLPITPPGNRPIAVPGPRTMAARWRHSRRAPCRRAI WMGYLSTSAEMQGWSTIDRGAISRYINGLEGDDGLPISYAANYSIEEQNRAWFLQGNFSGGRYRGNIGVRYVHSRDSTDG YSYAPGGGYRPVNFLSSYGKWLPSFNIAYDLRDDLMLRFASSKLIARSRYTNMTPYVAADDTTLTASTGNPRLSPYESTN LGASLEWYFSDSSLLSGEFFSRDISNYILTTVQDRVFSNNATGGASTYQTSVPSNAGDAKVRGVALNLQHNFGNGFGVVA NDTYSDSKADGDYRAVSRVKCNTSRDLLLAQRMDGQPSRPLIVQKLREPVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40969; Mature: 40969
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQRCSSTTPRPAIACNTTKNAIYSWISIMRWSGGHSPKSSPAPSLPITPPGNRPIAVPG CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC PRTMAARWRHSRRAPCRRAIWMGYLSTSAEMQGWSTIDRGAISRYINGLEGDDGLPISYA CHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEE ANYSIEEQNRAWFLQGNFSGGRYRGNIGVRYVHSRDSTDGYSYAPGGGYRPVNFLSSYGK ECCCEECCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH WLPSFNIAYDLRDDLMLRFASSKLIARSRYTNMTPYVAADDTTLTASTGNPRLSPYESTN HCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCCCCCCCC LGASLEWYFSDSSLLSGEFFSRDISNYILTTVQDRVFSNNATGGASTYQTSVPSNAGDAK CCCEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCE VRGVALNLQHNFGNGFGVVANDTYSDSKADGDYRAVSRVKCNTSRDLLLAQRMDGQPSRP EEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHEEEECCCCCCCHHHHHCCCCCCCC LIVQKLREPVF HHHHHHHCCCC >Mature Secondary Structure MRQRCSSTTPRPAIACNTTKNAIYSWISIMRWSGGHSPKSSPAPSLPITPPGNRPIAVPG CCCCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCC PRTMAARWRHSRRAPCRRAIWMGYLSTSAEMQGWSTIDRGAISRYINGLEGDDGLPISYA CHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEE ANYSIEEQNRAWFLQGNFSGGRYRGNIGVRYVHSRDSTDGYSYAPGGGYRPVNFLSSYGK ECCCEECCCCEEEEEECCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH WLPSFNIAYDLRDDLMLRFASSKLIARSRYTNMTPYVAADDTTLTASTGNPRLSPYESTN HCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEEECCCCCCCCCCCCCC LGASLEWYFSDSSLLSGEFFSRDISNYILTTVQDRVFSNNATGGASTYQTSVPSNAGDAK CCCEEEEEECCCCEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCE VRGVALNLQHNFGNGFGVVANDTYSDSKADGDYRAVSRVKCNTSRDLLLAQRMDGQPSRP EEEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHEEEECCCCCCCHHHHHCCCCCCCC LIVQKLREPVF HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA