Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625283
Identifier: 84625283
GI number: 84625283
Start: 4103578
End: 4104150
Strand: Reverse
Name: 84625283
Synonym: XOO_3626
Alternate gene names: NA
Gene position: 4104150-4103578 (Counterclockwise)
Preceding gene: 84625284
Following gene: 84625282
Centisome position: 83.08
GC content: 62.3
Gene sequence:
>573_bases TTGCTGGCATCGGCGATCAGACAGCTGCCCGAAGAGGAAGTCAACCTGGCGATAACCGAGGCTGCCGCGCTCCAGACCGG CCCCCGCACGCTGGCGGAGGTGACCTTACGCCTGCATCTTGTCGGATTGGAGCCGATCCATCGATTCCAGCACGCGTATG CGCAGCTTGCCGAGCGCCTGGCGCGTTCTGGCGATGGAGCCGAAGCCTTGATCCACTTGGTGGCCTTGTTGAACAGACTG TCCAATCCGGGATTGCGCCAGGCTGCCTTCAGGGAATTGACGCGGGCCCTGCACGCATTGGACAGCACAGAGAGTGGCGC TGCGGTGCTGCGGCGGTTGGCTACGGCGTTGCCGCACCAGCCTGACGAGGTGCGTTATCTGTGCAGCCTTGATGTGCTTG CAGCGACGGTGAGCCTCTTCCCGAGCGAGCAGATACAGGTCATTGCCACCGTTCGTGCGCAGGCTGCTGCGATACCGAAC CATGCCGATGAACTCATCGCCAGATGCGATGACGCGATCGCCACGGCCAGCATGATGCTTGCGACTGTGTCGCGCAGGTA TATGGACACGTGA
Upstream 100 bases:
>100_bases TAGGGGGCGTGCAAGGTGATGGTGGGCCAGGGGTGCAAGGCGCTGTGGCTCTGGCCCAGGGGGCGCTGCCGGAGGCATCG GCGGAGCGCTTCCGTTTGAT
Downstream 100 bases:
>100_bases GCACGGTGTGATTGAGTGTGGTCTGGTCACACAAGCGCACGCGCATACCTGGCGCCACCCTGTCCGGCCCGACCCTTGAG CAGATGAAACTTCGCAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MLASAIRQLPEEEVNLAITEAAALQTGPRTLAEVTLRLHLVGLEPIHRFQHAYAQLAERLARSGDGAEALIHLVALLNRL SNPGLRQAAFRELTRALHALDSTESGAAVLRRLATALPHQPDEVRYLCSLDVLAATVSLFPSEQIQVIATVRAQAAAIPN HADELIARCDDAIATASMMLATVSRRYMDT
Sequences:
>Translated_190_residues MLASAIRQLPEEEVNLAITEAAALQTGPRTLAEVTLRLHLVGLEPIHRFQHAYAQLAERLARSGDGAEALIHLVALLNRL SNPGLRQAAFRELTRALHALDSTESGAAVLRRLATALPHQPDEVRYLCSLDVLAATVSLFPSEQIQVIATVRAQAAAIPN HADELIARCDDAIATASMMLATVSRRYMDT >Mature_190_residues MLASAIRQLPEEEVNLAITEAAALQTGPRTLAEVTLRLHLVGLEPIHRFQHAYAQLAERLARSGDGAEALIHLVALLNRL SNPGLRQAAFRELTRALHALDSTESGAAVLRRLATALPHQPDEVRYLCSLDVLAATVSLFPSEQIQVIATVRAQAAAIPN HADELIARCDDAIATASMMLATVSRRYMDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20586; Mature: 20586
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLASAIRQLPEEEVNLAITEAAALQTGPRTLAEVTLRLHLVGLEPIHRFQHAYAQLAERL CCHHHHHHCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ARSGDGAEALIHLVALLNRLSNPGLRQAAFRELTRALHALDSTESGAAVLRRLATALPHQ HHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC PDEVRYLCSLDVLAATVSLFPSEQIQVIATVRAQAAAIPNHADELIARCDDAIATASMML CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ATVSRRYMDT HHHHHHHCCC >Mature Secondary Structure MLASAIRQLPEEEVNLAITEAAALQTGPRTLAEVTLRLHLVGLEPIHRFQHAYAQLAERL CCHHHHHHCCHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH ARSGDGAEALIHLVALLNRLSNPGLRQAAFRELTRALHALDSTESGAAVLRRLATALPHQ HHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC PDEVRYLCSLDVLAATVSLFPSEQIQVIATVRAQAAAIPNHADELIARCDDAIATASMML CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH ATVSRRYMDT HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA