Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is kdpC
Identifier: 84625279
GI number: 84625279
Start: 4098495
End: 4099124
Strand: Reverse
Name: kdpC
Synonym: XOO_3622
Alternate gene names: 84625279
Gene position: 4099124-4098495 (Counterclockwise)
Preceding gene: 84625280
Following gene: 84625278
Centisome position: 82.97
GC content: 67.14
Gene sequence:
>630_bases ATGTCTTCTTCCTTGCCGTTACGCGACGACGGCGCCCTGCGCGGTTCGCTGATGCTCGCGGTATTCACCCTGTTCGGCCT GGGCCTGGCCTACTCGCTGGTCGCCACCGGCATCACCGGCGCACTGTTCTCCGAGCAAGCCACCGGTTCGCTGGTGCGTG TCGATGCGCGCGTTGTCGGCTCGGCATTGGTTGCGCAGCCGTTTACCGATGCGCGCTATTTTCAGCCGCGTCCGTCGGCC GCCAAGTACGACCTCACCGCCGCGTCGGGCAGTAACCAGGCACGCTCCAATCCCGATTTGCTGGCCCGTATCGCTGCCAC CCGTGCGCAAGTGGCCAAACGCGACGGCATCGCCCCGGAGGCGGTGCCGGGCGAGCTGCTGACGCAATCCGGCAGTGGCC TGGACCCGCACCTGAGCCCGGCCGGCGCACAGGTGCAGATCCGCCGCGTGGCCGCCGCACGCGGCTTGCCCGAGCAACGC GTTGCTGCACTGGTGCAAGCTGCGACCGAAGCGCCACAGTTCGGTCTGCTTGGGCAACCGCGGGTCAACGTGCTCGCCCT GAATCTGGCGCTGGATAAGGCCGGCAATGGGGAGTCGGGAAGGGACAATGGTGTGAAGCAAGCGTACTAG
Upstream 100 bases:
>100_bases CTGCCGTTCGTTGCGATCAAAGTGATCGATCTGGTGCTGGTCGCCGTCTTCGGTGTCTGAGCCACGTGTGATGCACCTTT CTTCTTCTGAGATCATGTCC
Downstream 100 bases:
>100_bases AATCATCACGCAGCTGTACGCTCTGCGATTCCCGATTGCCCGATTGCCCGAATGAACGACGCCCGCACCCAGCAAGCCGA TGCCTTGATCGGCGAATTAC
Product: potassium-transporting ATPase subunit C
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] C chain; Potassium-binding and translocating subunit C; Potassium-translocating ATPase C chain
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSSSLPLRDDGALRGSLMLAVFTLFGLGLAYSLVATGITGALFSEQATGSLVRVDARVVGSALVAQPFTDARYFQPRPSA AKYDLTAASGSNQARSNPDLLARIAATRAQVAKRDGIAPEAVPGELLTQSGSGLDPHLSPAGAQVQIRRVAAARGLPEQR VAALVQAATEAPQFGLLGQPRVNVLALNLALDKAGNGESGRDNGVKQAY
Sequences:
>Translated_209_residues MSSSLPLRDDGALRGSLMLAVFTLFGLGLAYSLVATGITGALFSEQATGSLVRVDARVVGSALVAQPFTDARYFQPRPSA AKYDLTAASGSNQARSNPDLLARIAATRAQVAKRDGIAPEAVPGELLTQSGSGLDPHLSPAGAQVQIRRVAAARGLPEQR VAALVQAATEAPQFGLLGQPRVNVLALNLALDKAGNGESGRDNGVKQAY >Mature_208_residues SSSLPLRDDGALRGSLMLAVFTLFGLGLAYSLVATGITGALFSEQATGSLVRVDARVVGSALVAQPFTDARYFQPRPSAA KYDLTAASGSNQARSNPDLLARIAATRAQVAKRDGIAPEAVPGELLTQSGSGLDPHLSPAGAQVQIRRVAAARGLPEQRV AALVQAATEAPQFGLLGQPRVNVLALNLALDKAGNGESGRDNGVKQAY
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex
COG id: COG2156
COG function: function code P; K+-transporting ATPase, c chain
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Probable)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpC family
Homologues:
Organism=Escherichia coli, GI1786913, Length=184, Percent_Identity=42.9347826086957, Blast_Score=118, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ATKC_XANOM (Q2NZA0)
Other databases:
- EMBL: AP008229 - RefSeq: YP_452651.1 - STRING: Q2NZA0 - GeneID: 3856966 - GenomeReviews: AP008229_GR - KEGG: xom:XOO_3622 - eggNOG: COG2156 - HOGENOM: HBG724180 - OMA: GSNNYAP - PhylomeDB: Q2NZA0 - ProtClustDB: PRK00315 - BioCyc: XORY342109:XOO3622-MONOMER - HAMAP: MF_00276 - InterPro: IPR003820 - PIRSF: PIRSF001296 - TIGRFAMs: TIGR00681
Pfam domain/function: PF02669 KdpC
EC number: =3.6.3.12
Molecular weight: Translated: 21561; Mature: 21430
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x124eec84)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSLPLRDDGALRGSLMLAVFTLFGLGLAYSLVATGITGALFSEQATGSLVRVDARVVG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH SALVAQPFTDARYFQPRPSAAKYDLTAASGSNQARSNPDLLARIAATRAQVAKRDGIAPE HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AVPGELLTQSGSGLDPHLSPAGAQVQIRRVAAARGLPEQRVAALVQAATEAPQFGLLGQP CCCHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC RVNVLALNLALDKAGNGESGRDNGVKQAY CCEEEEEEEEEECCCCCCCCCCCCCCCCH >Mature Secondary Structure SSSLPLRDDGALRGSLMLAVFTLFGLGLAYSLVATGITGALFSEQATGSLVRVDARVVG CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHH SALVAQPFTDARYFQPRPSAAKYDLTAASGSNQARSNPDLLARIAATRAQVAKRDGIAPE HHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AVPGELLTQSGSGLDPHLSPAGAQVQIRRVAAARGLPEQRVAALVQAATEAPQFGLLGQP CCCHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCC RVNVLALNLALDKAGNGESGRDNGVKQAY CCEEEEEEEEEECCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA