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The map label for this gene is kdpE [H]

Identifier: 84625277

GI number: 84625277

Start: 4095077

End: 4095793

Strand: Reverse

Name: kdpE [H]

Synonym: XOO_3620

Alternate gene names: 84625277

Gene position: 4095793-4095077 (Counterclockwise)

Preceding gene: 84625278

Following gene: 84625272

Centisome position: 82.91

GC content: 65.55

Gene sequence:

>717_bases
ATGCCGACTGACCTCACTGCCATCCCGCCCGCCCGTGTGCTGATCGTCGACGACGAGCCGCAGATCCGCCGTTTTCTCGA
TATCAGCCTGCGTGCGCAAGGCTACCGCGTGCTGCAGGCCGGCACCGCCGAAGAAGGCATGGCCTTGCTGGCCGGGCAGG
GCGCCGAACTGGTGGTGCTGGACATCGGTCTGCCGGACCGCGACGGCCACGAGATGCTGCGCGAGATTCGTCAGTGGTCC
AACGTGCCGGTGATCATGCTCACCGTGCGTGCCGGCGAAACCGAAAAGGTCGCCGCGCTCGATGCCGGCGCCAACGATTA
CGTCACCAAACCCTTCGGCGTGCAGGAATTGATGGCACGCATCCGCGTATTGCTGCGTCAGGCCGGTGCCGGCAGCACGG
TGGAAGAAAGCGTGTTCGACGATGGCCGCCTGCACATCCATCTGGGCCTGCGCGAAGTCACCCTCAACGGCGAAGCCGTG
CCGCTGAGCCGCAAGGAATACGCCTTGCTCGCACTGCTGCTCAAGCACGCCGGCCGCGTGGTGACCCAACCGCAATTGCT
GCGCGAACTGTGGGGCCCCACCCACGAAGAAGACACCCACTACCTGCGCATCCTGGTCGGCAAACTGCGCCAGAAACTGC
AGGACGATGCCGCCGCCCCGCATTACATCGTCACCGAACCCGGCGTGGGGCTGCGGTTTATCGGGGTGACGCGCTGA

Upstream 100 bases:

>100_bases
CACGGCGGCAGCGTAGAGGCATTGGCAGGCGCGCATGGTCACGGCACCACAATTCGCATTACGCTGCCGTTGCTCGTTCC
CGCCGCGCCACCTCGCCCCG

Downstream 100 bases:

>100_bases
GGCAAGCGCGTCGCTAGGCGGGCGGCAACACCTTGCCAGGATTCAAGATCCCATCCGGGTCCAGTACGGCCTTGATCGCA
CGCATCGCCGCCAGCGTGGA

Product: two-component system regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MPTDLTAIPPARVLIVDDEPQIRRFLDISLRAQGYRVLQAGTAEEGMALLAGQGAELVVLDIGLPDRDGHEMLREIRQWS
NVPVIMLTVRAGETEKVAALDAGANDYVTKPFGVQELMARIRVLLRQAGAGSTVEESVFDDGRLHIHLGLREVTLNGEAV
PLSRKEYALLALLLKHAGRVVTQPQLLRELWGPTHEEDTHYLRILVGKLRQKLQDDAAAPHYIVTEPGVGLRFIGVTR

Sequences:

>Translated_238_residues
MPTDLTAIPPARVLIVDDEPQIRRFLDISLRAQGYRVLQAGTAEEGMALLAGQGAELVVLDIGLPDRDGHEMLREIRQWS
NVPVIMLTVRAGETEKVAALDAGANDYVTKPFGVQELMARIRVLLRQAGAGSTVEESVFDDGRLHIHLGLREVTLNGEAV
PLSRKEYALLALLLKHAGRVVTQPQLLRELWGPTHEEDTHYLRILVGKLRQKLQDDAAAPHYIVTEPGVGLRFIGVTR
>Mature_237_residues
PTDLTAIPPARVLIVDDEPQIRRFLDISLRAQGYRVLQAGTAEEGMALLAGQGAELVVLDIGLPDRDGHEMLREIRQWSN
VPVIMLTVRAGETEKVAALDAGANDYVTKPFGVQELMARIRVLLRQAGAGSTVEESVFDDGRLHIHLGLREVTLNGEAVP
LSRKEYALLALLLKHAGRVVTQPQLLRELWGPTHEEDTHYLRILVGKLRQKLQDDAAAPHYIVTEPGVGLRFIGVTR

Specific function: Member of the two-component regulatory system kdpD/kdpE involved in the regulation of the kdp operon [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1786911, Length=222, Percent_Identity=48.6486486486487, Blast_Score=209, Evalue=1e-55,
Organism=Escherichia coli, GI1789809, Length=228, Percent_Identity=34.6491228070175, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1787375, Length=218, Percent_Identity=34.4036697247706, Blast_Score=130, Evalue=9e-32,
Organism=Escherichia coli, GI87082012, Length=228, Percent_Identity=32.8947368421053, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1786784, Length=220, Percent_Identity=34.0909090909091, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1790552, Length=203, Percent_Identity=38.423645320197, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1790863, Length=230, Percent_Identity=30.8695652173913, Blast_Score=111, Evalue=3e-26,
Organism=Escherichia coli, GI1788394, Length=228, Percent_Identity=28.5087719298246, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI1789402, Length=220, Percent_Identity=32.7272727272727, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI1787229, Length=228, Percent_Identity=29.3859649122807, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786599, Length=225, Percent_Identity=29.7777777777778, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI2367329, Length=233, Percent_Identity=30.0429184549356, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1790860, Length=207, Percent_Identity=33.3333333333333, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI145693140, Length=232, Percent_Identity=26.2931034482759, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1788550, Length=114, Percent_Identity=39.4736842105263, Blast_Score=77, Evalue=9e-16,
Organism=Escherichia coli, GI1788191, Length=122, Percent_Identity=31.9672131147541, Blast_Score=61, Evalue=5e-11,
Organism=Escherichia coli, GI1788905, Length=124, Percent_Identity=31.4516129032258, Blast_Score=61, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26282; Mature: 26151

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTDLTAIPPARVLIVDDEPQIRRFLDISLRAQGYRVLQAGTAEEGMALLAGQGAELVVL
CCCCCCCCCCEEEEEECCCHHHHHHHHHEECCCCEEEEECCCCCCCEEEEECCCCEEEEE
DIGLPDRDGHEMLREIRQWSNVPVIMLTVRAGETEKVAALDAGANDYVTKPFGVQELMAR
ECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHH
IRVLLRQAGAGSTVEESVFDDGRLHIHLGLREVTLNGEAVPLSRKEYALLALLLKHAGRV
HHHHHHHCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
VTQPQLLRELWGPTHEEDTHYLRILVGKLRQKLQDDAAAPHYIVTEPGVGLRFIGVTR
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECC
>Mature Secondary Structure 
PTDLTAIPPARVLIVDDEPQIRRFLDISLRAQGYRVLQAGTAEEGMALLAGQGAELVVL
CCCCCCCCCEEEEEECCCHHHHHHHHHEECCCCEEEEECCCCCCCEEEEECCCCEEEEE
DIGLPDRDGHEMLREIRQWSNVPVIMLTVRAGETEKVAALDAGANDYVTKPFGVQELMAR
ECCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHH
IRVLLRQAGAGSTVEESVFDDGRLHIHLGLREVTLNGEAVPLSRKEYALLALLLKHAGRV
HHHHHHHCCCCCCHHHHHCCCCEEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
VTQPQLLRELWGPTHEEDTHYLRILVGKLRQKLQDDAAAPHYIVTEPGVGLRFIGVTR
CCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1532388; 8905232; 9278503 [H]