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The map label for this gene is rsmI [H]

Identifier: 84625272

GI number: 84625272

Start: 4090105

End: 4090926

Strand: Reverse

Name: rsmI [H]

Synonym: XOO_3615

Alternate gene names: 84625272

Gene position: 4090926-4090105 (Counterclockwise)

Preceding gene: 84625277

Following gene: 84625269

Centisome position: 82.81

GC content: 69.46

Gene sequence:

>822_bases
ATGACGTCCCCTGGAACCCTGCACGTGGTCGCCACGCCGATCGGCAACCTGGCCGACCTGTCGCCGCGCGCGCAGGAGGT
GCTGCGTGGCGTGGCCGCAATCTGCGCCGAGGACACCCGCCACACTCGCCAGTTGCTCAGCCATTTCAGCATCGACCGCC
CACTGCTGGCTCTGCACGACCACAACGAAGAGGCCATGTCCGAACGCATCGTGGCACGCCTGCGCGAGGGCGAATCGCTG
GCCATCGTCAGCGACGCCGGCACCCCGCTAGTGAGTGACCCTGGCTTCAAGCTGGTGCGCGCCGCCCGCGCCGCCGGCAT
CAAGGTCAGCCCCGTACCCGGCGCCTGTGCTGCGATTGCCGCGCTCAGCGTCGCCGGCCTGCCCAGCGACCGTTTTGGCT
TCGAAGGATTTCTGCCGGCAAAGAGCGCCGCCCGCCGCGAGCGCCTGACGCGGCTGGCCGGCGAGACCCGTACCCTGGTG
TTCTACGAATCGTCGCACCGCATCGTCGAATCGCTGGCCGACCTGCGCTTGGCCTTCGGCGACGAACGCCCGGCGGTCGT
TGCCCGCGAGCTGACCAAACTGTTCGAAACCGTACTCGACGGCACCCTGGCGCAACTGCAGGCCCAGGTCGAAGCCGACG
ACAACCAGCGCAAGGGCGAGTTCGTGGTAATGGTGCAAGGCGCCGCCGATGCCGCCGACGGCCAGCTCGCCGAAGGCCGC
CGCGTCTACGCCAAGCTCGCCGAACACCTGCCGCCGTCCACCGCCGCCAAGCTCGCTGCCGAGCTGACCGGCGCGCCGCG
TAAGGCCTTGTATGGCGGCTAG

Upstream 100 bases:

>100_bases
TGCAACACGCTTGTTCATTTCAGATCCATTGGACAGGGTGCCGCCAGGGCGGACTGTTAAAAACGCTACGATTCTACCCT
TTGCCCCCGGAAAACCGCTG

Downstream 100 bases:

>100_bases
GCTTGCCGTTGCAGGGCCGTGTCTGGAGGCGAATGTGGTTGGTCGGTACGGCTTCTCGCGCCCAGATGCGCTCCTACGGG
GCAATGGCAAGCTTGAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTSPGTLHVVATPIGNLADLSPRAQEVLRGVAAICAEDTRHTRQLLSHFSIDRPLLALHDHNEEAMSERIVARLREGESL
AIVSDAGTPLVSDPGFKLVRAARAAGIKVSPVPGACAAIAALSVAGLPSDRFGFEGFLPAKSAARRERLTRLAGETRTLV
FYESSHRIVESLADLRLAFGDERPAVVARELTKLFETVLDGTLAQLQAQVEADDNQRKGEFVVMVQGAADAADGQLAEGR
RVYAKLAEHLPPSTAAKLAAELTGAPRKALYGG

Sequences:

>Translated_273_residues
MTSPGTLHVVATPIGNLADLSPRAQEVLRGVAAICAEDTRHTRQLLSHFSIDRPLLALHDHNEEAMSERIVARLREGESL
AIVSDAGTPLVSDPGFKLVRAARAAGIKVSPVPGACAAIAALSVAGLPSDRFGFEGFLPAKSAARRERLTRLAGETRTLV
FYESSHRIVESLADLRLAFGDERPAVVARELTKLFETVLDGTLAQLQAQVEADDNQRKGEFVVMVQGAADAADGQLAEGR
RVYAKLAEHLPPSTAAKLAAELTGAPRKALYGG
>Mature_272_residues
TSPGTLHVVATPIGNLADLSPRAQEVLRGVAAICAEDTRHTRQLLSHFSIDRPLLALHDHNEEAMSERIVARLREGESLA
IVSDAGTPLVSDPGFKLVRAARAAGIKVSPVPGACAAIAALSVAGLPSDRFGFEGFLPAKSAARRERLTRLAGETRTLVF
YESSHRIVESLADLRLAFGDERPAVVARELTKLFETVLDGTLAQLQAQVEADDNQRKGEFVVMVQGAADAADGQLAEGRR
VYAKLAEHLPPSTAAKLAAELTGAPRKALYGG

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=270, Percent_Identity=53.7037037037037, Blast_Score=281, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 29013; Mature: 28882

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSPGTLHVVATPIGNLADLSPRAQEVLRGVAAICAEDTRHTRQLLSHFSIDRPLLALHD
CCCCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
HNEEAMSERIVARLREGESLAIVSDAGTPLVSDPGFKLVRAARAAGIKVSPVPGACAAIA
CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHH
ALSVAGLPSDRFGFEGFLPAKSAARRERLTRLAGETRTLVFYESSHRIVESLADLRLAFG
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCC
DERPAVVARELTKLFETVLDGTLAQLQAQVEADDNQRKGEFVVMVQGAADAADGQLAEGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHH
RVYAKLAEHLPPSTAAKLAAELTGAPRKALYGG
HHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
TSPGTLHVVATPIGNLADLSPRAQEVLRGVAAICAEDTRHTRQLLSHFSIDRPLLALHD
CCCCEEEEEECCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEC
HNEEAMSERIVARLREGESLAIVSDAGTPLVSDPGFKLVRAARAAGIKVSPVPGACAAIA
CCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEECCCCCHHHHHH
ALSVAGLPSDRFGFEGFLPAKSAARRERLTRLAGETRTLVFYESSHRIVESLADLRLAFG
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCC
DERPAVVARELTKLFETVLDGTLAQLQAQVEADDNQRKGEFVVMVQGAADAADGQLAEGR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCHHHHH
RVYAKLAEHLPPSTAAKLAAELTGAPRKALYGG
HHHHHHHHHCCCHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]