Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622643
Identifier: 84622643
GI number: 84622643
Start: 1075010
End: 1076329
Strand: Direct
Name: 84622643
Synonym: XOO_0986
Alternate gene names: NA
Gene position: 1075010-1076329 (Clockwise)
Preceding gene: 84622638
Following gene: 84622646
Centisome position: 21.76
GC content: 62.95
Gene sequence:
>1320_bases GTGTTGAATAGGTCACTGGAAGTGCGTTTTGAACAGTACGGGGAAGTAGTTGCTGCCGCCCTGTCCCATGCGGATCGCAA ACAGCCCGCACACTGGTACCTGAAAGGGTTGCTACTGCCTGGAGGGCGCAAGAGCGTGGAGCCCATGGCCGCGCGGGTGC ACCCGCAGAACGTGCGCTCAGCCCATCAATCGATGCACCATCTGGTGGCCGATGCCGACTGGAGCGATCAAGCGCTGCTG GCGGCGGTGGCGGCACAGGTGCTGCCGACCCTGAGCAGGAAGAGCGCAGCGTGTCACTGGATCGTGGACGACACGGGATT TTCAAAGAAGGGGGTGCATTCGGTCGGTGTTGCACGCCAGTACTGCGGCCGCCTTGGCAAGACGGACAATTGCCAGGTTG CCGTGAGTTTGTCGATCGCCAACGAACACGGCAGCCTGCCAGTGGGCTATCGGCTGTATCTTCCCGAGCAGTGGGCTCAG GACACTGTGCGGCGCAAGAAGGCAGGCGTTCCGGATCAGGTCGTGTTTCAGACCAAGACAGCGCTGGCCATGGATCAGAT CGACAGCGCGCTGGCGACAGGGATGGCGGCAGGCGTCGTGCTAGCCGATGCGGCCTACGGCACCGAGACCCACTGGCGAG ACCAGCTCAGCGAACGCGGCCTGCTGTACATGGTCGGCGTCCGCAGCAACACGAAGGTCTGGTGGGGATCGCACCAACCT GCGCCCATGCCGCCAGCCAGCCCTAAGGGCGGTCGGCCCTGCACACGACCGATGCGCGATAGCGCACATGCGCCGATCTC GGTACATGAAGTCGCGCAGCGCTTGCCCGCAAGGACGTATCGGCAGGTCAGCTGGCGCCAGGGCAGCGACGCAACGCTCA GTTCGCGGTTCGCGGCGGTGCGGGTTCGTGCCGCACACAATCGCCAGGCACATGACGAGCAGTGGCTGCTGATCGAGTGG CCGCCGGGAGAGTCCGAGCCCCGCCACTACTGGTTCTCGACGCTACCAAAGCAAACGCCGGTCAAGACACTGGTTGCCAC GGCACAAGGCCGATGGCGGATTGAACGCGATTATCAGGAGCTGAAGTCGGAGTTGGGCCTGCATCACTATGAAGGGCGCA ACTGGCGTGGTTTTCACCATCACGCCAGTCTGTGCATCGCCGCATACGGGTTCTTGATGCGCGAGCGCCTGCGCAGTAAA AAAAACTCCGTCGCATTCAAGATGCCTGCAGTATCCAAAAGCGTCCGCCCGCGCGGGTCTGGCCCCAATGCAACGTCACC ATCCCAACTCGATTGCCACGCTGGCCTTCGGACTGGCTAG
Upstream 100 bases:
>100_bases TGGAAACAAGGATGACGATGTCTTCGTCAGTTCCACTGTGTTACAAATAATCGTATCTTTGTGCCACTATTGGAAGACCT TCAGGCCGCGTGGGAGAGCT
Downstream 100 bases:
>100_bases GCTTATCGCCAGAAGCCTCCCACACTGCCCGTGTTGCGGGGTCTCACCTTACCAACGGATTCGTATTTAGTAACACAGTA GAATTAGGCCGCCTTGGGAT
Product: ISXo8 transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALL AAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGMAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP APMPPASPKGGRPCTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEW PPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSK KNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG
Sequences:
>Translated_439_residues MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALL AAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGMAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP APMPPASPKGGRPCTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEW PPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSK KNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG >Mature_439_residues MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRSAHQSMHHLVADADWSDQALL AAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQYCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQ DTVRRKKAGVPDQVVFQTKTALAMDQIDSALATGMAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP APMPPASPKGGRPCTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEW PPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSK KNSVAFKMPAVSKSVRPRGSGPNATSPSQLDCHAGLRTG
Specific function: Involved in the transposition of the insertion sequence [H]
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012337 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48798; Mature: 48798
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHHHCCHHHHHH AHQSMHHLVADADWSDQALLAAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHH YCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKT HHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH ALAMDQIDSALATGMAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP HHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEECCCCC APMPPASPKGGRPCTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHE RVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQE EEEHHHCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCEEEHHHHHH LKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGS HHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCC GPNATSPSQLDCHAGLRTG CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLNRSLEVRFEQYGEVVAAALSHADRKQPAHWYLKGLLLPGGRKSVEPMAARVHPQNVRS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCCHHHHHCCHHHHHH AHQSMHHLVADADWSDQALLAAVAAQVLPTLSRKSAACHWIVDDTGFSKKGVHSVGVARQ HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHH YCGRLGKTDNCQVAVSLSIANEHGSLPVGYRLYLPEQWAQDTVRRKKAGVPDQVVFQTKT HHHHCCCCCCCEEEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHH ALAMDQIDSALATGMAAGVVLADAAYGTETHWRDQLSERGLLYMVGVRSNTKVWWGSHQP HHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEECCCCC APMPPASPKGGRPCTRPMRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAV CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHE RVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQE EEEHHHCCCCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCHHHHHHHCCCCEEEHHHHHH LKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRGS HHHHCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCC GPNATSPSQLDCHAGLRTG CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1662761 [H]