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The map label for this gene is 84622603

Identifier: 84622603

GI number: 84622603

Start: 1033341

End: 1035188

Strand: Direct

Name: 84622603

Synonym: XOO_0946

Alternate gene names: NA

Gene position: 1033341-1035188 (Clockwise)

Preceding gene: 84622602

Following gene: 84622604

Centisome position: 20.92

GC content: 68.13

Gene sequence:

>1848_bases
ATGGACTTGATGCAGTACGTTGCGATCAGTCAAGACGGTCGCACTCTCGAACTCCAGTTTGCCGGTCAGAACGCTCCGCA
TCCCAATCTGCTCTTTCCGCTGCGTCTGCAACTAACCTGGGCACTGAGCGAGCCGTTCACCGCCGATGTCACCTGCCTGA
GCCAATCCTCGGCGATCGAACTCAAGACGCTGCTCGGCCAGCGCGCCGGCATCACCATCCGGCACCACGACGGCGAGCGC
AAGGTCAACGGCGTGGTGACCGCCGTGCGGCAGTTGGGCGCCGACGGCGGCTTGTCCAGTTACCGCTTGCGGATACAGCC
CGCGCTGGCGCTGTTGGCCTATCGCCGCACCTGCCGCATCTTCAAGGAGGAGAGCGTGCCGGACATCGTTGCGCAGATCG
TGCAGGAGCATCGCGCCAGCAATCCCCCGATCGCCGCCAGTTTCCGCCTGGACCAGCAGTTGCGCCAGACCTACGCGCCG
CGCTCGTATTGCACGCAGTTCGACGAAGACGACCTCGGCTTCATCCATCGCGTGCTGGCCGAGGAAGGTATCAACTACAC
GTTTGTCTTCGCCGACGACCAGGGCGCCCCGACGCACACGCTGGTGTTGTTCGACGACGTCAACGACTTGGCCCAGGCCA
GCCCGGCCCGCATCGGCTATCGCCGTGCCGAAGACGCCACGCCGGCCGACAGCCTGCTGGCCTGGCAGGGCGAGCGGCAG
GTCATGACCTCGGCCACCACCCTGGTGAGCTACGACTACAAGCCGGCCGCCTCCAGCAACGCGGACGATCGGTCCGTGAT
CTACCAGGGCGAGGAAGGGCGCGCGGCCAGCGCCACGCTGCGGGATTACAGCGCGCTGTCGCCCTACTACGCCAGCGACA
GTGCCGAATACGCGCGCTATGCCCAGGTGCGCCAGACCTGGCACGACCAGCGGGCCAAGACCTGGTATGGCGGTGCGACG
ACGCCTGGCCTGGAAGTCGGCACGTATGTCGAGATCGCCGACCATCCATCGCTGGCTCAGGACAGCAGCGAGCAGCGCCA
GTTCGTGGTGACCGAGCAGTTCCTGGACATCACCAACAACCTGCCCGCGGACATGACCCGCCAGCTGCCCAGCGGCCTGC
TGGGGCTTTCCTCGGCCGACGTCAGCCCCCCACCATCGCTGGCAGCGGTCCCCCCGCCACCCGCAGGGGCCGCGCAATAC
CTCCGCTTTGCCGGCGTGCGGCGCGGTGTGGCCTTGGTGCCGTCGCGCGTCCCATCGCTGCGCCGGCCCACCGCATCGGG
GCCGCAGACTGCCACGGTGGTCGGCAAGGCCGGCGAAGTGGTCGATACCGACGAGCTGGGGCGCATCCTGGTCCAGATGC
ACTGGCCGCTGGCGCAGGAGCACGCCAAGGGCGGCGCCAACGACGACGAGCGCTCCAGCACGCGCGTGCGCTATGCCTCC
CCCTCGGCCAGTGAGGGGTTCGGCCACCAGTTCATCCCGCGCGTGGGCGATGAGGTGTTGATCGAGTTCCTGCACGGCGA
TATCGACCGACCGATCGCCGTGGCGGTCATCCACAACGGCCGCCGGCCCACCGCCGCGTTCAGCGGCGCGCGTGGTCTGC
CGGGCAATCGCACGCTCTCGGGCATCCTCACGCGCGAGCACAACGGCAGTGGTGCCAATGAACTGCTGTTCGACGACACC
ACCGGGCAACCGCGTGCGCGCCTGGCCAGCACCCACCAGGCCAGTGAGTTGAATCTGGGCTACCTGACCCATCCCCGCGC
CGACGGCCAGGCCGATCCACGCGGCCAGGGTGCCGAACTGCGCACCGACGCGGCAGCGCCTTGCGCGCTGCCCAGGGCAT
GTTGCTGA

Upstream 100 bases:

>100_bases
TGTAGGGCTGTGCGAATGCATTGACGACGACATTGCCGCAGTCAATCGTCGGAGCGTCCCCGCCCGAAATTGTTCGTCTA
TCCCACGGAGCGCAGTCCAG

Downstream 100 bases:

>100_bases
CCACCTACGCGCGCAGCCAGGCCGCAGGCCACCAACTCGACCGCGGCGAACTCGACGCGCTGTTGGCGCAATGCCTCGAA
CTGTTCAAGGGCCTGGGCGA

Product: putative VGR-related protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VGR-Related Protein; Rhs Element Vgr Family Protein; Vgr-Related Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; VGR-Like Protein; Rhs Element Vgr Family; VGR-Related Type VI Secretion System Protein; Rhs Element Vgr Related Protein; Vgr Related Protein; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Protein; Rhs/Vgr-Family Protein; VgrG-Like Protein; Rhs Element Vgr-Related Protein; Vgr Protein; Rhs Accessory Genetic Element; Rhs Element Vgr Protein Subfamily; Vgr Family Type VI Secretion System; Type VI Secretion System Effector Protein VgrS; Vrg Family Protein; VrgG Protein

Number of amino acids: Translated: 615; Mature: 615

Protein sequence:

>615_residues
MDLMQYVAISQDGRTLELQFAGQNAPHPNLLFPLRLQLTWALSEPFTADVTCLSQSSAIELKTLLGQRAGITIRHHDGER
KVNGVVTAVRQLGADGGLSSYRLRIQPALALLAYRRTCRIFKEESVPDIVAQIVQEHRASNPPIAASFRLDQQLRQTYAP
RSYCTQFDEDDLGFIHRVLAEEGINYTFVFADDQGAPTHTLVLFDDVNDLAQASPARIGYRRAEDATPADSLLAWQGERQ
VMTSATTLVSYDYKPAASSNADDRSVIYQGEEGRAASATLRDYSALSPYYASDSAEYARYAQVRQTWHDQRAKTWYGGAT
TPGLEVGTYVEIADHPSLAQDSSEQRQFVVTEQFLDITNNLPADMTRQLPSGLLGLSSADVSPPPSLAAVPPPPAGAAQY
LRFAGVRRGVALVPSRVPSLRRPTASGPQTATVVGKAGEVVDTDELGRILVQMHWPLAQEHAKGGANDDERSSTRVRYAS
PSASEGFGHQFIPRVGDEVLIEFLHGDIDRPIAVAVIHNGRRPTAAFSGARGLPGNRTLSGILTREHNGSGANELLFDDT
TGQPRARLASTHQASELNLGYLTHPRADGQADPRGQGAELRTDAAAPCALPRACC

Sequences:

>Translated_615_residues
MDLMQYVAISQDGRTLELQFAGQNAPHPNLLFPLRLQLTWALSEPFTADVTCLSQSSAIELKTLLGQRAGITIRHHDGER
KVNGVVTAVRQLGADGGLSSYRLRIQPALALLAYRRTCRIFKEESVPDIVAQIVQEHRASNPPIAASFRLDQQLRQTYAP
RSYCTQFDEDDLGFIHRVLAEEGINYTFVFADDQGAPTHTLVLFDDVNDLAQASPARIGYRRAEDATPADSLLAWQGERQ
VMTSATTLVSYDYKPAASSNADDRSVIYQGEEGRAASATLRDYSALSPYYASDSAEYARYAQVRQTWHDQRAKTWYGGAT
TPGLEVGTYVEIADHPSLAQDSSEQRQFVVTEQFLDITNNLPADMTRQLPSGLLGLSSADVSPPPSLAAVPPPPAGAAQY
LRFAGVRRGVALVPSRVPSLRRPTASGPQTATVVGKAGEVVDTDELGRILVQMHWPLAQEHAKGGANDDERSSTRVRYAS
PSASEGFGHQFIPRVGDEVLIEFLHGDIDRPIAVAVIHNGRRPTAAFSGARGLPGNRTLSGILTREHNGSGANELLFDDT
TGQPRARLASTHQASELNLGYLTHPRADGQADPRGQGAELRTDAAAPCALPRACC
>Mature_615_residues
MDLMQYVAISQDGRTLELQFAGQNAPHPNLLFPLRLQLTWALSEPFTADVTCLSQSSAIELKTLLGQRAGITIRHHDGER
KVNGVVTAVRQLGADGGLSSYRLRIQPALALLAYRRTCRIFKEESVPDIVAQIVQEHRASNPPIAASFRLDQQLRQTYAP
RSYCTQFDEDDLGFIHRVLAEEGINYTFVFADDQGAPTHTLVLFDDVNDLAQASPARIGYRRAEDATPADSLLAWQGERQ
VMTSATTLVSYDYKPAASSNADDRSVIYQGEEGRAASATLRDYSALSPYYASDSAEYARYAQVRQTWHDQRAKTWYGGAT
TPGLEVGTYVEIADHPSLAQDSSEQRQFVVTEQFLDITNNLPADMTRQLPSGLLGLSSADVSPPPSLAAVPPPPAGAAQY
LRFAGVRRGVALVPSRVPSLRRPTASGPQTATVVGKAGEVVDTDELGRILVQMHWPLAQEHAKGGANDDERSSTRVRYAS
PSASEGFGHQFIPRVGDEVLIEFLHGDIDRPIAVAVIHNGRRPTAAFSGARGLPGNRTLSGILTREHNGSGANELLFDDT
TGQPRARLASTHQASELNLGYLTHPRADGQADPRGQGAELRTDAAAPCALPRACC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66771; Mature: 66771

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLMQYVAISQDGRTLELQFAGQNAPHPNLLFPLRLQLTWALSEPFTADVTCLSQSSAIE
CCHHHHEEECCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCHHH
LKTLLGQRAGITIRHHDGERKVNGVVTAVRQLGADGGLSSYRLRIQPALALLAYRRTCRI
HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHH
FKEESVPDIVAQIVQEHRASNPPIAASFRLDQQLRQTYAPRSYCTQFDEDDLGFIHRVLA
HHHCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH
EEGINYTFVFADDQGAPTHTLVLFDDVNDLAQASPARIGYRRAEDATPADSLLAWQGERQ
HCCCCEEEEEECCCCCCEEEEEEEECCHHHHHCCCHHCCCCCCCCCCCHHHHHCCCCCHH
VMTSATTLVSYDYKPAASSNADDRSVIYQGEEGRAASATLRDYSALSPYYASDSAEYARY
HHHHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
AQVRQTWHDQRAKTWYGGATTPGLEVGTYVEIADHPSLAQDSSEQRQFVVTEQFLDITNN
HHHHHHHHHHHCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHEEEHHHHHHHHHCC
LPADMTRQLPSGLLGLSSADVSPPPSLAAVPPPPAGAAQYLRFAGVRRGVALVPSRVPSL
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
RRPTASGPQTATVVGKAGEVVDTDELGRILVQMHWPLAQEHAKGGANDDERSSTRVRYAS
CCCCCCCCCEEEEEECCCCEECHHHHHHEEHHCCCCHHHHHHCCCCCCCCCCCCEEEECC
PSASEGFGHQFIPRVGDEVLIEFLHGDIDRPIAVAVIHNGRRPTAAFSGARGLPGNRTLS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCEE
GILTREHNGSGANELLFDDTTGQPRARLASTHQASELNLGYLTHPRADGQADPRGQGAEL
EEEEECCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
RTDAAAPCALPRACC
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLMQYVAISQDGRTLELQFAGQNAPHPNLLFPLRLQLTWALSEPFTADVTCLSQSSAIE
CCHHHHEEECCCCCEEEEEECCCCCCCCCEEEEEEEEEEEEECCCCCCCEEEECCCCHHH
LKTLLGQRAGITIRHHDGERKVNGVVTAVRQLGADGGLSSYRLRIQPALALLAYRRTCRI
HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHH
FKEESVPDIVAQIVQEHRASNPPIAASFRLDQQLRQTYAPRSYCTQFDEDDLGFIHRVLA
HHHCCCHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH
EEGINYTFVFADDQGAPTHTLVLFDDVNDLAQASPARIGYRRAEDATPADSLLAWQGERQ
HCCCCEEEEEECCCCCCEEEEEEEECCHHHHHCCCHHCCCCCCCCCCCHHHHHCCCCCHH
VMTSATTLVSYDYKPAASSNADDRSVIYQGEEGRAASATLRDYSALSPYYASDSAEYARY
HHHHHEEEEEECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHH
AQVRQTWHDQRAKTWYGGATTPGLEVGTYVEIADHPSLAQDSSEQRQFVVTEQFLDITNN
HHHHHHHHHHHCCEEECCCCCCCCCCCCEEEECCCCCCCCCCCHHHEEEHHHHHHHHHCC
LPADMTRQLPSGLLGLSSADVSPPPSLAAVPPPPAGAAQYLRFAGVRRGVALVPSRVPSL
CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
RRPTASGPQTATVVGKAGEVVDTDELGRILVQMHWPLAQEHAKGGANDDERSSTRVRYAS
CCCCCCCCCEEEEEECCCCEECHHHHHHEEHHCCCCHHHHHHCCCCCCCCCCCCEEEECC
PSASEGFGHQFIPRVGDEVLIEFLHGDIDRPIAVAVIHNGRRPTAAFSGARGLPGNRTLS
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHCCCCCCCCCCCCEE
GILTREHNGSGANELLFDDTTGQPRARLASTHQASELNLGYLTHPRADGQADPRGQGAEL
EEEEECCCCCCCCCEEEECCCCCCHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCCCCC
RTDAAAPCALPRACC
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA