Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622530
Identifier: 84622530
GI number: 84622530
Start: 956833
End: 957315
Strand: Direct
Name: 84622530
Synonym: XOO_0873
Alternate gene names: NA
Gene position: 956833-957315 (Clockwise)
Preceding gene: 84622527
Following gene: 84622532
Centisome position: 19.37
GC content: 65.42
Gene sequence:
>483_bases ATGTCCAGGCTCGCGCGTTTGCTCCTCGTTTTGCTGCTGTCCCTGACTGCTCAGATCGCCGCTGCGGCCACGCCTGCGCC CGCCTTCGTGGATGCCGTGGATTGGCCCGCCAATGGCGAAGGCTGGGAGGCGTTCATCGATCTGGAGCAGCGGCTGGATC GGGATTTCGACAACATCTGCGGCGACACCTTTTGCGCTGGCGAATTCAGCGACTACCAGCCGTTGCGCTTCCGCTGCTCC GTGCACCGTGTCACCGGAGTGGTGCGCAGCTGCATCTGGACCTTCGGTGCCAGTGAGGTCAGCGTCGACCCCCGCACCGG CTACCTGCGTTCGGACAGCCGCGTCTGGCGCTGCACGGCGCCGCTGAAAGACGGCACCCGCCTGGACGAGATGTATCGCA CGCTTGCGGTCACCAATCCGCTGTTCGAGCCACTGCCGGGCGGTGCCCCGCCGATCTATGACGGCTTGATCGGCTGCCTG TAA
Upstream 100 bases:
>100_bases TGCGTGCGGCATAGCCCGCGTTCATCGCGGGCGGCTCCCCGATCGTTGCGGCCCGACCGGCGGCGCACGCTACCGGCTCA TCCATCGCATAGGAAGTGCC
Downstream 100 bases:
>100_bases TCGACGGCCGACGTGGAAGGCCTTGCCAGGCCTGGCGGACCTCGTTTGCGAAGGATGCCATCTTCGCATCGACGATCAGC GCCACCAATGCACGAGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 159
Protein sequence:
>160_residues MSRLARLLLVLLLSLTAQIAAAATPAPAFVDAVDWPANGEGWEAFIDLEQRLDRDFDNICGDTFCAGEFSDYQPLRFRCS VHRVTGVVRSCIWTFGASEVSVDPRTGYLRSDSRVWRCTAPLKDGTRLDEMYRTLAVTNPLFEPLPGGAPPIYDGLIGCL
Sequences:
>Translated_160_residues MSRLARLLLVLLLSLTAQIAAAATPAPAFVDAVDWPANGEGWEAFIDLEQRLDRDFDNICGDTFCAGEFSDYQPLRFRCS VHRVTGVVRSCIWTFGASEVSVDPRTGYLRSDSRVWRCTAPLKDGTRLDEMYRTLAVTNPLFEPLPGGAPPIYDGLIGCL >Mature_159_residues SRLARLLLVLLLSLTAQIAAAATPAPAFVDAVDWPANGEGWEAFIDLEQRLDRDFDNICGDTFCAGEFSDYQPLRFRCSV HRVTGVVRSCIWTFGASEVSVDPRTGYLRSDSRVWRCTAPLKDGTRLDEMYRTLAVTNPLFEPLPGGAPPIYDGLIGCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17657; Mature: 17526
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLARLLLVLLLSLTAQIAAAATPAPAFVDAVDWPANGEGWEAFIDLEQRLDRDFDNIC CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHC GDTFCAGEFSDYQPLRFRCSVHRVTGVVRSCIWTFGASEVSVDPRTGYLRSDSRVWRCTA CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEECCCCEEEEEC PLKDGTRLDEMYRTLAVTNPLFEPLPGGAPPIYDGLIGCL CCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure SRLARLLLVLLLSLTAQIAAAATPAPAFVDAVDWPANGEGWEAFIDLEQRLDRDFDNIC HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHC GDTFCAGEFSDYQPLRFRCSVHRVTGVVRSCIWTFGASEVSVDPRTGYLRSDSRVWRCTA CCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCEECCCCEEEEEC PLKDGTRLDEMYRTLAVTNPLFEPLPGGAPPIYDGLIGCL CCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA