Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622500
Identifier: 84622500
GI number: 84622500
Start: 921113
End: 921748
Strand: Direct
Name: 84622500
Synonym: XOO_0843
Alternate gene names: NA
Gene position: 921113-921748 (Clockwise)
Preceding gene: 84622498
Following gene: 84622501
Centisome position: 18.65
GC content: 65.72
Gene sequence:
>636_bases ATGAAAAGTCAAGACATCCTGCTCTTGCTGAAGCTGGTCAGCCTTGAGCGCCAGCAATCGGTCCCTGTAGGCGGCGAGAA AGCAGCGCTCGGCATTCCCGATGACTGGCGCGGCTGGGCCATGTCGGCGGCTCAGGAGGATGGGGGGGCGAGCGGCTTGG CCGAAGATGCGTTCTCCGTGCGCGGCCTTGAGGAATCCACCGGCATCAGCAAATCGGAAGTCAGTCAGGCGCTCCGCCGT TGCACCGAGGTGGGGCTGGTCGTGGCCGAGCGCGGCAGCGGCATCCCGCGCGCCAACACGCGCGCGCTGCTGGGCTTCGT ATTGAACGGGTTGAAGTATGTGTTTCCGGCGCGCCCGGGTCCGATTGTCCGTGGCATTCCCACGGCACACGCAGCGCCCG TGCTGGTCGATCGCCTGTTGTCCTCAGGCCAACACATCTACGTTTGGGAGGACGGCTACGGCAGCGCGCAGGGCCAGCGT GTGGAGCCGCTCTACAAGAGTGTGCCGCGTGCCGTACGTCGCGATGCGGAGCTGTACGCCATGCTGGCGTTGGTGGACGC GATCCGGCTGGGGCGTGAGCGTGAGTCGGCGCTTGCCGGCAGTGTGCTGACCCAATATCTGCGGGAGGTGCCGTAA
Upstream 100 bases:
>100_bases GGAGAGCCAGCTATATAGCAGTACGGACGTTGCCTGACCTGCGTTCTATAGTATCCTTGTCCTCTGTTTCAGGACAGGGG ACGGATCTCTTTCGTTACTC
Downstream 100 bases:
>100_bases TGGGCACGCCTGGAAACTGGGATATCCAGCAGCACATGCTGGCACGCGTGGCCCAAGCGCTTGGGCCGGATCTGCTGCCG GACGTCGCCTTCGTCGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MKSQDILLLLKLVSLERQQSVPVGGEKAALGIPDDWRGWAMSAAQEDGGASGLAEDAFSVRGLEESTGISKSEVSQALRR CTEVGLVVAERGSGIPRANTRALLGFVLNGLKYVFPARPGPIVRGIPTAHAAPVLVDRLLSSGQHIYVWEDGYGSAQGQR VEPLYKSVPRAVRRDAELYAMLALVDAIRLGRERESALAGSVLTQYLREVP
Sequences:
>Translated_211_residues MKSQDILLLLKLVSLERQQSVPVGGEKAALGIPDDWRGWAMSAAQEDGGASGLAEDAFSVRGLEESTGISKSEVSQALRR CTEVGLVVAERGSGIPRANTRALLGFVLNGLKYVFPARPGPIVRGIPTAHAAPVLVDRLLSSGQHIYVWEDGYGSAQGQR VEPLYKSVPRAVRRDAELYAMLALVDAIRLGRERESALAGSVLTQYLREVP >Mature_211_residues MKSQDILLLLKLVSLERQQSVPVGGEKAALGIPDDWRGWAMSAAQEDGGASGLAEDAFSVRGLEESTGISKSEVSQALRR CTEVGLVVAERGSGIPRANTRALLGFVLNGLKYVFPARPGPIVRGIPTAHAAPVLVDRLLSSGQHIYVWEDGYGSAQGQR VEPLYKSVPRAVRRDAELYAMLALVDAIRLGRERESALAGSVLTQYLREVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22704; Mature: 22704
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSQDILLLLKLVSLERQQSVPVGGEKAALGIPDDWRGWAMSAAQEDGGASGLAEDAFSV CCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHH RGLEESTGISKSEVSQALRRCTEVGLVVAERGSGIPRANTRALLGFVLNGLKYVFPARPG CCCHHHCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC PIVRGIPTAHAAPVLVDRLLSSGQHIYVWEDGYGSAQGQRVEPLYKSVPRAVRRDAELYA CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MLALVDAIRLGRERESALAGSVLTQYLREVP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSQDILLLLKLVSLERQQSVPVGGEKAALGIPDDWRGWAMSAAQEDGGASGLAEDAFSV CCCCHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHCCCCCCCHHHHHHHH RGLEESTGISKSEVSQALRRCTEVGLVVAERGSGIPRANTRALLGFVLNGLKYVFPARPG CCCHHHCCCCHHHHHHHHHHHHHHCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC PIVRGIPTAHAAPVLVDRLLSSGQHIYVWEDGYGSAQGQRVEPLYKSVPRAVRRDAELYA CCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MLALVDAIRLGRERESALAGSVLTQYLREVP HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA