Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is purA [H]
Identifier: 84622497
GI number: 84622497
Start: 914115
End: 915407
Strand: Direct
Name: purA [H]
Synonym: XOO_0840
Alternate gene names: 84622497
Gene position: 914115-915407 (Clockwise)
Preceding gene: 84622496
Following gene: 84622498
Centisome position: 18.5
GC content: 65.43
Gene sequence:
>1293_bases ATGGGTCAGTCAGTTGTCGTGCTCGGTGCCCAGTGGGGCGATGAAGGCAAGGGCAAGATCGTCGATCTGCTTACCGAAGA AATCGGTGCGGTCGTCCGCTTCCAGGGCGGCCATAACGCCGGCCATACGCTCGTCATCAATGGCAAGAAGACCGTCTTGC ATCTGATCCCGTCCGGCATCCTGCGCGACGACGCGCTGTGCCTGATCGGCAATGGCGTGGTGATCTCCCCGGCCGCGTTG ATCAAAGAGGTCAGCGAGCTGGAAGACGCCGGCGTGGAAGTGCGCTCGCGCCTGAAGATTTCCCCTGCCGCGCCGTTGAT CATGCCGTACCACATCGCCCTGGATCAGGCGCGCGAAAAAGCGGCCGGCGGCAAGGCCATCGGCACCACCGGCCGTGGTA TCGGCCCGGCCTATGAAGACAAGGTGGCGCGTCGCGGCATCCGCATCGCCGACCTGCATTACCCGCCGCAGCTGGAAGAG CTGCTGCGCACCGCGCTGGATTACCACAACTTCGTGCTGACCAAGTACCTGGGCGTGGAAGCGGTCGATTTCCAGAAGAC CTACGACGAAGCGCTGGCCTTCGGCGACTACGTCCAGCCGATGAAGTCGGACGTGGCCGGCATCCTGCACGACCTGCGCA AGCAGGGCAAGCGCGTGCTGTTCGAAGGCGCGCAGGGCGCGTTGCTGGACATCGATCACGGCACCTATCCCTACGTCACC AGCTCCAATACCACTGTGGGCGGCGCGCTGGCCGGCACCGGTGTGGGCGCCGATGCGATCGACTACGTGTTGGGTATCGC CAAGGCGTACGCCACGCGCGTCGGCGGCGGCCCGTTCCCGACCGAGCTGGACGATGCAGTGGGCCAGGGCATCCGCGACC GCGGTGCCGAGTACGGTGCCTCCACCGGCCGCCCGCGCCGCTGCGGCTGGATGGACATCGTTGCGCTCAAGCGTGCGGTG GCCATCAACGGTATCTCCGGCCTGTGCATCACCAAGCTCGACGTGCTCGATGGCATGGAAAAGCTCAAGGTCTGCATCGC CTACGAATACCGCGGCAAGCGCACCGAATATGCACCGCTGGACGCGCAGGGTTGGGAAGAGTGCACCCCTGTGTACCTGG AATTCCCGGGCTGGACCGAGAACACCCATGGCATCACCGAGTGGGACAAGCTGCCCGTCGCGGCCCGCGCCTACCTGCGC GCGTTGGAAGAACTGGCTGGCTGCCCGATCTCGATCGTCTCCACCGGCCCGGACCGCGACCACACCATGGTGCTGCAGGA CCCGTTCGCGTGA
Upstream 100 bases:
>100_bases GCTCCCCGATGGAGCTGCGCGCAGGGTGTCGCTGCCAACCCTGCGTCGGTCCCATCCCGCGGCCCCGATGGCCGCAGCAA AACTCAGGAGTTCACCCGTC
Downstream 100 bases:
>100_bases TCGGCTGATGCGTGAGTGAAGCGACAAAAGCCCTGCGAAAGCGGGGCTTTTGTGTGCGTGATGCTGTCGAGCGCTGCTTT TGCAAGCCCTATCGGTGCGG
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase; AdSS; IMP--aspartate ligase [H]
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGILRDDALCLIGNGVVISPAAL IKEVSELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREKAAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEE LLRTALDYHNFVLTKYLGVEAVDFQKTYDEALAFGDYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVT SSNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDAVGQGIRDRGAEYGASTGRPRRCGWMDIVALKRAV AINGISGLCITKLDVLDGMEKLKVCIAYEYRGKRTEYAPLDAQGWEECTPVYLEFPGWTENTHGITEWDKLPVAARAYLR ALEELAGCPISIVSTGPDRDHTMVLQDPFA
Sequences:
>Translated_430_residues MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGILRDDALCLIGNGVVISPAAL IKEVSELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREKAAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEE LLRTALDYHNFVLTKYLGVEAVDFQKTYDEALAFGDYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVT SSNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDAVGQGIRDRGAEYGASTGRPRRCGWMDIVALKRAV AINGISGLCITKLDVLDGMEKLKVCIAYEYRGKRTEYAPLDAQGWEECTPVYLEFPGWTENTHGITEWDKLPVAARAYLR ALEELAGCPISIVSTGPDRDHTMVLQDPFA >Mature_429_residues GQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGILRDDALCLIGNGVVISPAALI KEVSELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREKAAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEEL LRTALDYHNFVLTKYLGVEAVDFQKTYDEALAFGDYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVTS SNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDAVGQGIRDRGAEYGASTGRPRRCGWMDIVALKRAVA INGISGLCITKLDVLDGMEKLKVCIAYEYRGKRTEYAPLDAQGWEECTPVYLEFPGWTENTHGITEWDKLPVAARAYLRA LEELAGCPISIVSTGPDRDHTMVLQDPFA
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=428, Percent_Identity=41.3551401869159, Blast_Score=321, Evalue=7e-88, Organism=Homo sapiens, GI34577063, Length=430, Percent_Identity=40.6976744186046, Blast_Score=303, Evalue=1e-82, Organism=Homo sapiens, GI40316944, Length=398, Percent_Identity=39.4472361809045, Blast_Score=282, Evalue=4e-76, Organism=Escherichia coli, GI1790620, Length=430, Percent_Identity=60.6976744186046, Blast_Score=541, Evalue=1e-155, Organism=Caenorhabditis elegans, GI25146553, Length=434, Percent_Identity=43.0875576036866, Blast_Score=337, Evalue=5e-93, Organism=Caenorhabditis elegans, GI25146555, Length=434, Percent_Identity=43.0875576036866, Blast_Score=337, Evalue=8e-93, Organism=Saccharomyces cerevisiae, GI6324109, Length=428, Percent_Identity=42.2897196261682, Blast_Score=334, Evalue=1e-92, Organism=Drosophila melanogaster, GI21356033, Length=418, Percent_Identity=41.6267942583732, Blast_Score=322, Evalue=3e-88,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 46178; Mature: 46047
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGI CCCCEEEEEECCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCEEEECCCCEEEEECCCCC LRDDALCLIGNGVVISPAALIKEVSELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREK CCCCCEEEECCCEEECHHHHHHHHHHHHHCCHHHHHCEEECCCCCCEEEHHHHHHHHHHH AAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEELLRTALDYHNFVLTKYLGVE HCCCCEECCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCE AVDFQKTYDEALAFGDYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVT EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEE SSNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDAVGQGIRDRGAEYGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCCCCCC STGRPRRCGWMDIVALKRAVAINGISGLCITKLDVLDGMEKLKVCIAYEYRGKRTEYAPL CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHEEEEEEEECCCCCCCCCC DAQGWEECTPVYLEFPGWTENTHGITEWDKLPVAARAYLRALEELAGCPISIVSTGPDRD CCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC HTMVLQDPFA CEEEEECCCC >Mature Secondary Structure GQSVVVLGAQWGDEGKGKIVDLLTEEIGAVVRFQGGHNAGHTLVINGKKTVLHLIPSGI CCCEEEEEECCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCEEEECCCCEEEEECCCCC LRDDALCLIGNGVVISPAALIKEVSELEDAGVEVRSRLKISPAAPLIMPYHIALDQAREK CCCCCEEEECCCEEECHHHHHHHHHHHHHCCHHHHHCEEECCCCCCEEEHHHHHHHHHHH AAGGKAIGTTGRGIGPAYEDKVARRGIRIADLHYPPQLEELLRTALDYHNFVLTKYLGVE HCCCCEECCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCE AVDFQKTYDEALAFGDYVQPMKSDVAGILHDLRKQGKRVLFEGAQGALLDIDHGTYPYVT EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCCEEE SSNTTVGGALAGTGVGADAIDYVLGIAKAYATRVGGGPFPTELDDAVGQGIRDRGAEYGA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHCCCCCCC STGRPRRCGWMDIVALKRAVAINGISGLCITKLDVLDGMEKLKVCIAYEYRGKRTEYAPL CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHEEEEEEEECCCCCCCCCC DAQGWEECTPVYLEFPGWTENTHGITEWDKLPVAARAYLRALEELAGCPISIVSTGPDRD CCCCCCCCCCEEEECCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCC HTMVLQDPFA CEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA