Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622446
Identifier: 84622446
GI number: 84622446
Start: 856637
End: 857425
Strand: Direct
Name: 84622446
Synonym: XOO_0789
Alternate gene names: NA
Gene position: 856637-857425 (Clockwise)
Preceding gene: 84622445
Following gene: 84622447
Centisome position: 17.34
GC content: 63.75
Gene sequence:
>789_bases ATGCCGGTGTCTGCTGTCCAACCATCCATGAAGAAGAGAGACGGACGTTTGGTATCGCGGGCAGTGCTGGAAGAAATGCG CCTGATGGCGTTGCAACGGATGGGCGAAGGCGAATCGCCGGCCGAAGTGGCCTCGTCGTTCGGGCTGCATCGCGGCTGGG CGTACAAAGTGCTGGCGCGAGCACAGGAGGGCGGCGCTGGCGCATTGATGACGCGTAAAGGCAGCGGTCGCCCGCGGACG TTGACGCCGGCGCAGGAGCGCCAGGTGTTCGGCTGGGTCAATGGCAAGAACCCTCGCCAGCATGGCTTCGCCTTCGGTTT GTGGACGCGGCAGGTCGTGCGTGAACTGATCGAGAAGAAATGTGCCGCACGGTTGAGTCTGGCCAGCGTCGGGACGTTGC TGGCGCGGCTGGGGCTGAGCCCACAGAAGCCGCTGCAACACGCCTATCAGCGCGATCCACTGGCGGTAGCACAGTGGGAA AAGCAGACTTACCCGGCGATCGTGACGCACGCCAAGCGGGAAAAGGCCGAGATTGACTTCTGGGACGCGTCTGGCTTCCG TGCCGATGCGGTGCAAGGACGGACGTGGGCCGTCAAGGGCGTCACGCCGGTTGTCGCTGTGCCGGGGCAGCGCCAGAGCA TCAGTGCGGCCTCGGCGGTGAACAGCAAGGGCGGGTTCTGGTTCGCCGTGTACAGCGGCGGCTTGAACGGTGAATTGTTC GTGGCCCTGCTCAAGCGAATGATGAAAGGCCGTCGCCGTCCAATCCATCTGGTGCTTGATGGTTCCTGA
Upstream 100 bases:
>100_bases GGCTTGCGATCTGGACCCATGCGGCTGCGCAGGTGCCGCGTTTGTTGCAGAAGAAGTGACTTTCTGTGCGTTACTCATAA GTCAGTAAATTAGGGAGCAA
Downstream 100 bases:
>100_bases TTAGCACGCACTTTCAGCGGTGAACATGGTGACATCACGCAGGGCCCGCTCGGACCACGGCTTGCTGGCGGCTGCGGCGG CCAGCAAGCTGGGCACCACT
Product: ISXoo2 transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives; ISXo7 Transposase; ISXoo2 Transposase; Helix-Turn-Helix Type; Transposase Of IS; Transposase And Inactivated Derivatives-Like Protein; Cation Diffusion Facilitator Family Transporter; Isxo7 Transposase; Transposase IS; Transposase Fragmentary Gene
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MPVSAVQPSMKKRDGRLVSRAVLEEMRLMALQRMGEGESPAEVASSFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRT LTPAQERQVFGWVNGKNPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWE KQTYPAIVTHAKREKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELF VALLKRMMKGRRRPIHLVLDGS
Sequences:
>Translated_262_residues MPVSAVQPSMKKRDGRLVSRAVLEEMRLMALQRMGEGESPAEVASSFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRT LTPAQERQVFGWVNGKNPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWE KQTYPAIVTHAKREKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELF VALLKRMMKGRRRPIHLVLDGS >Mature_261_residues PVSAVQPSMKKRDGRLVSRAVLEEMRLMALQRMGEGESPAEVASSFGLHRGWAYKVLARAQEGGAGALMTRKGSGRPRTL TPAQERQVFGWVNGKNPRQHGFAFGLWTRQVVRELIEKKCAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEK QTYPAIVTHAKREKAEIDFWDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELFV ALLKRMMKGRRRPIHLVLDGS
Specific function: Unknown
COG id: COG3415
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28742; Mature: 28610
Theoretical pI: Translated: 11.54; Mature: 11.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVSAVQPSMKKRDGRLVSRAVLEEMRLMALQRMGEGESPAEVASSFGLHRGWAYKVLAR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHH AQEGGAGALMTRKGSGRPRTLTPAQERQVFGWVNGKNPRQHGFAFGLWTRQVVRELIEKK HCCCCCCEEEEECCCCCCCCCCCHHHCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHH CAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQTYPAIVTHAKREKAEIDF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCEEE WDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELF ECCCCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCCCHHHH VALLKRMMKGRRRPIHLVLDGS HHHHHHHHHCCCCCEEEEEECC >Mature Secondary Structure PVSAVQPSMKKRDGRLVSRAVLEEMRLMALQRMGEGESPAEVASSFGLHRGWAYKVLAR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHH AQEGGAGALMTRKGSGRPRTLTPAQERQVFGWVNGKNPRQHGFAFGLWTRQVVRELIEKK HCCCCCCEEEEECCCCCCCCCCCHHHCEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHHH CAARLSLASVGTLLARLGLSPQKPLQHAYQRDPLAVAQWEKQTYPAIVTHAKREKAEIDF HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCEEE WDASGFRADAVQGRTWAVKGVTPVVAVPGQRQSISAASAVNSKGGFWFAVYSGGLNGELF ECCCCCCCCCCCCCEEEECCCCEEEECCCCCCHHHHHHHCCCCCCEEEEEEECCCCHHHH VALLKRMMKGRRRPIHLVLDGS HHHHHHHHHCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA