Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is nodX [H]
Identifier: 84622370
GI number: 84622370
Start: 767293
End: 768345
Strand: Direct
Name: nodX [H]
Synonym: XOO_0713
Alternate gene names: 84622370
Gene position: 767293-768345 (Clockwise)
Preceding gene: 84622369
Following gene: 84622371
Centisome position: 15.53
GC content: 45.11
Gene sequence:
>1053_bases ATGGCTCAGTCTGAGTTGGCTCACCGCAGTAATAATTTTGATTTTATTCGCATTGTTGCCGCTACCAGCGTGCTGGTGAG CCATCATTTTGCTTTGGCCAAGCTGCCAGAACCACTGGTACTTCAATTCCAGACCTTGGGTGGTTATGGGGTCTTTATTT TCTTTTCGATTAGTGGTTTTTTAGTTGCGCAGAGTTGGCAGCGTGATCCTAGTCTTGTCCGTTTCACTTATCGGCGATTG CTTCGTATCTGGCCGGGTATGCTTTGCGTCCTTATTTTGTGTGCATTTTTACTCGGGCCAGCTGTTACGACGCTTTCTCT TAAGGAATACTTCTTAAATGAGTTAACTTGGACTTATTTCAAAACCATGCTGTTTCAAGTGCAGCCATTTTTGCAAGGTG TGTTTCCAGATAGTGCGGTTCCTTATATTCCCAACGGGGTGCTTTGGACTATTCCAATAGAGGTGCATTGCTATGGCTAC CTCGCCATTCTAGGAGTAATTGGTGTATTGCGCTGGCGCTGGGTGCTTCTAGCTGCCACGGCAGCCTTAGCTGTTTATTA CTATGGCTATCATGACGCTGAAAATGTATTCCGGGCTGGTGGTGGAAGAGTACATGAAATAGAATTCGCCACTTTCTTCT TCTCTGGTGTTCTCTTGCACTACTTTCGCGAGATATGGTCGAGTTGGAATCGAATTATTCCAAGTTTTTTGGTGGTTATG ACAGCATTTTTGCTGCTTTTTCAAAACGACCATCAGTTGATCGCGGTCTTCTTGTTTACGCCTTTCTTCTTTGTAGTCTT GGGGAACTTGTCTTTTCCAATTATGAGAAGATTCGGCCGCTTCGGTGACATGTCCTACGGTATTTACATTTATGCTTTCC CAGTGCAGCAAACTCTATTTTGGCTTTGGGGTGAAAGTATTTCGTTTAATACAAGCCTCGCGCTAGCACTCACGATTACT GGGCTATTGGCCTGGATTTCTTGGCATCTTATCGAGCAGCCTGCCTTGCGGCTAAAGCCACGTACTCCAAAAAGGATTAT GGCCGGTGAGTAA
Upstream 100 bases:
>100_bases ATTTGTATGATTCTGGCGCTCTCGCTACCGCGTTGAAGTCTGAATTCGCCAATGTTACTAACACCCGAACCAGTAATTAT CCTGAGCGAGTATAGATACT
Downstream 100 bases:
>100_bases TTGCGTCTTCCATTAGTTCCACTGTGTTACAAATAATCGTATCTTTGTGCCACTATTGGAAGACCTTCAGGCCGCGTGGG AGAGCTGTGTTGAATAGGTC
Product: putative o-antigen acetylase
Products: NA
Alternate protein names: Nodulation protein X; Probable sugar acetylase [H]
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MAQSELAHRSNNFDFIRIVAATSVLVSHHFALAKLPEPLVLQFQTLGGYGVFIFFSISGFLVAQSWQRDPSLVRFTYRRL LRIWPGMLCVLILCAFLLGPAVTTLSLKEYFLNELTWTYFKTMLFQVQPFLQGVFPDSAVPYIPNGVLWTIPIEVHCYGY LAILGVIGVLRWRWVLLAATAALAVYYYGYHDAENVFRAGGGRVHEIEFATFFFSGVLLHYFREIWSSWNRIIPSFLVVM TAFLLLFQNDHQLIAVFLFTPFFFVVLGNLSFPIMRRFGRFGDMSYGIYIYAFPVQQTLFWLWGESISFNTSLALALTIT GLLAWISWHLIEQPALRLKPRTPKRIMAGE
Sequences:
>Translated_350_residues MAQSELAHRSNNFDFIRIVAATSVLVSHHFALAKLPEPLVLQFQTLGGYGVFIFFSISGFLVAQSWQRDPSLVRFTYRRL LRIWPGMLCVLILCAFLLGPAVTTLSLKEYFLNELTWTYFKTMLFQVQPFLQGVFPDSAVPYIPNGVLWTIPIEVHCYGY LAILGVIGVLRWRWVLLAATAALAVYYYGYHDAENVFRAGGGRVHEIEFATFFFSGVLLHYFREIWSSWNRIIPSFLVVM TAFLLLFQNDHQLIAVFLFTPFFFVVLGNLSFPIMRRFGRFGDMSYGIYIYAFPVQQTLFWLWGESISFNTSLALALTIT GLLAWISWHLIEQPALRLKPRTPKRIMAGE >Mature_349_residues AQSELAHRSNNFDFIRIVAATSVLVSHHFALAKLPEPLVLQFQTLGGYGVFIFFSISGFLVAQSWQRDPSLVRFTYRRLL RIWPGMLCVLILCAFLLGPAVTTLSLKEYFLNELTWTYFKTMLFQVQPFLQGVFPDSAVPYIPNGVLWTIPIEVHCYGYL AILGVIGVLRWRWVLLAATAALAVYYYGYHDAENVFRAGGGRVHEIEFATFFFSGVLLHYFREIWSSWNRIIPSFLVVMT AFLLLFQNDHQLIAVFLFTPFFFVVLGNLSFPIMRRFGRFGDMSYGIYIYAFPVQQTLFWLWGESISFNTSLALALTITG LLAWISWHLIEQPALRLKPRTPKRIMAGE
Specific function: Not known. NodX allows Rhizobium leguminosarum biovar viciae strain TOM to nodulate Afghanistan peas [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the acyltransferase 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002656 [H]
Pfam domain/function: PF01757 Acyl_transf_3 [H]
EC number: NA
Molecular weight: Translated: 40236; Mature: 40105
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQSELAHRSNNFDFIRIVAATSVLVSHHFALAKLPEPLVLQFQTLGGYGVFIFFSISGF CCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHH LVAQSWQRDPSLVRFTYRRLLRIWPGMLCVLILCAFLLGPAVTTLSLKEYFLNELTWTYF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTMLFQVQPFLQGVFPDSAVPYIPNGVLWTIPIEVHCYGYLAILGVIGVLRWRWVLLAAT HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH AALAVYYYGYHDAENVFRAGGGRVHEIEFATFFFSGVLLHYFREIWSSWNRIIPSFLVVM HHHHHHHHCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAFLLLFQNDHQLIAVFLFTPFFFVVLGNLSFPIMRRFGRFGDMSYGIYIYAFPVQQTLF HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEEEEHHHHHH WLWGESISFNTSLALALTITGLLAWISWHLIEQPALRLKPRTPKRIMAGE HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQSELAHRSNNFDFIRIVAATSVLVSHHFALAKLPEPLVLQFQTLGGYGVFIFFSISGF CCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEHHHH LVAQSWQRDPSLVRFTYRRLLRIWPGMLCVLILCAFLLGPAVTTLSLKEYFLNELTWTYF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KTMLFQVQPFLQGVFPDSAVPYIPNGVLWTIPIEVHCYGYLAILGVIGVLRWRWVLLAAT HHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH AALAVYYYGYHDAENVFRAGGGRVHEIEFATFFFSGVLLHYFREIWSSWNRIIPSFLVVM HHHHHHHHCCCCHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAFLLLFQNDHQLIAVFLFTPFFFVVLGNLSFPIMRRFGRFGDMSYGIYIYAFPVQQTLF HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCEEEEEEEHHHHHH WLWGESISFNTSLALALTITGLLAWISWHLIEQPALRLKPRTPKRIMAGE HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3419422 [H]