Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622369
Identifier: 84622369
GI number: 84622369
Start: 766625
End: 767287
Strand: Direct
Name: 84622369
Synonym: XOO_0712
Alternate gene names: NA
Gene position: 766625-767287 (Clockwise)
Preceding gene: 84622368
Following gene: 84622370
Centisome position: 15.52
GC content: 49.62
Gene sequence:
>663_bases ATGGATATCCCCGCAGGTATTTCTTTTTGTATCTTGATTTCTACTGATGTTGTTCGCAAGGTGGGAATCATGGATCCCTG CTTCGGGCGTGGCTATTGCGAGGAGACCGATTGGAGCCTACGTAGCCTTGCAGCCGGCTATCGGATTGCGTTGGCTCCTG GGACTTATGTTTTTCATCACGGACGTGGATCGAATTTGGATGCAGGTCTGGTTTCCTCGAATGCAACGACCGTGCCTGCA AATGAAGCCATCATCGACCTTCGCTATCCTCAATTTCGCAATCAGGTAGAAGCGTTTGTGCACTCAGGCGTGCTTTCGCG CGCGCATGATGATGCAATCTCTCATATTGTGCGGAGTGCTGGTAAACAATTTGGCTATTCGATAGACGTGGGTTGGATTG GGCGCGACCGGACTAACGAAGACGAAGTTAATATTTTGCTATCACCAAACGGTGCTAATGATCATATACAGGCGGTATTC AGAGGCTTCAGGCTCGATATGCAGGTGAGTCGCCGGAACCTGGGACAGGAGATCCGCAAGTTTTTCGGTCAAGACCCAAC TGCCGTCAATTTGTATGATTCTGGCGCTCTCGCTACCGCGTTGAAGTCTGAATTCGCCAATGTTACTAACACCCGAACCA GTAATTATCCTGAGCGAGTATAG
Upstream 100 bases:
>100_bases ATATTCGTTGCCTAACGAAGATCCTAATCGTTATCTGCATGATCAGAATGTAGTTGACTGGATGCATGCTACTTTGGCAG GTCATTTCGGTGACGCGGTT
Downstream 100 bases:
>100_bases ATACTATGGCTCAGTCTGAGTTGGCTCACCGCAGTAATAATTTTGATTTTATTCGCATTGTTGCCGCTACCAGCGTGCTG GTGAGCCATCATTTTGCTTT
Product: putative glycosyl transferase
Products: NA
Alternate protein names: FkbM Family Methyltransferase; Glycosyl Transferase
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MDIPAGISFCILISTDVVRKVGIMDPCFGRGYCEETDWSLRSLAAGYRIALAPGTYVFHHGRGSNLDAGLVSSNATTVPA NEAIIDLRYPQFRNQVEAFVHSGVLSRAHDDAISHIVRSAGKQFGYSIDVGWIGRDRTNEDEVNILLSPNGANDHIQAVF RGFRLDMQVSRRNLGQEIRKFFGQDPTAVNLYDSGALATALKSEFANVTNTRTSNYPERV
Sequences:
>Translated_220_residues MDIPAGISFCILISTDVVRKVGIMDPCFGRGYCEETDWSLRSLAAGYRIALAPGTYVFHHGRGSNLDAGLVSSNATTVPA NEAIIDLRYPQFRNQVEAFVHSGVLSRAHDDAISHIVRSAGKQFGYSIDVGWIGRDRTNEDEVNILLSPNGANDHIQAVF RGFRLDMQVSRRNLGQEIRKFFGQDPTAVNLYDSGALATALKSEFANVTNTRTSNYPERV >Mature_220_residues MDIPAGISFCILISTDVVRKVGIMDPCFGRGYCEETDWSLRSLAAGYRIALAPGTYVFHHGRGSNLDAGLVSSNATTVPA NEAIIDLRYPQFRNQVEAFVHSGVLSRAHDDAISHIVRSAGKQFGYSIDVGWIGRDRTNEDEVNILLSPNGANDHIQAVF RGFRLDMQVSRRNLGQEIRKFFGQDPTAVNLYDSGALATALKSEFANVTNTRTSNYPERV
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24225; Mature: 24225
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIPAGISFCILISTDVVRKVGIMDPCFGRGYCEETDWSLRSLAAGYRIALAPGTYVFHH CCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCEEEEEC GRGSNLDAGLVSSNATTVPANEAIIDLRYPQFRNQVEAFVHSGVLSRAHDDAISHIVRSA CCCCCCCCCEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKQFGYSIDVGWIGRDRTNEDEVNILLSPNGANDHIQAVFRGFRLDMQVSRRNLGQEIRK HHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH FFGQDPTAVNLYDSGALATALKSEFANVTNTRTSNYPERV HHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDIPAGISFCILISTDVVRKVGIMDPCFGRGYCEETDWSLRSLAAGYRIALAPGTYVFHH CCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCEEEECCCEEEEEC GRGSNLDAGLVSSNATTVPANEAIIDLRYPQFRNQVEAFVHSGVLSRAHDDAISHIVRSA CCCCCCCCCEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKQFGYSIDVGWIGRDRTNEDEVNILLSPNGANDHIQAVFRGFRLDMQVSRRNLGQEIRK HHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH FFGQDPTAVNLYDSGALATALKSEFANVTNTRTSNYPERV HHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA