Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622337
Identifier: 84622337
GI number: 84622337
Start: 733364
End: 733939
Strand: Direct
Name: 84622337
Synonym: XOO_0680
Alternate gene names: NA
Gene position: 733364-733939 (Clockwise)
Preceding gene: 84622336
Following gene: 84622338
Centisome position: 14.84
GC content: 60.59
Gene sequence:
>576_bases ATGAAGACGTGTATCGCGGCCGTGCTGTTGGCCCTGCCTGGGCTTGCCGTTGCGCAAGACGTGCCGCTGGGCTATGCAGT TCAGGGCGGAATGACGCTGCAGGAGATCGACCCTGCCATCTATGCGTATCACTACGACCACGGATTCGTGGGCGAGGATG CGCTGGGCTGGGATCCTGCGCTGCAATTCGCCTGGTCGCGTATCGCAGCCGCCAAAGTCTGCGCACAGCAATCGCCGTCC GATGCATTGATCGGCAAGTTGGTGGAGCAATACGGCAAGGATGCCGTGGTGCATCGGATCAACGGCATCGGCTTCCATGA AGCGCAGATGCGTGCGGCTGGCACGTTCTGTACGCCTGCGCGCGTTGCGGAAGCCACTGCAGTGGCACCAGCGTTTGCGG CTGGTGATTTTTCGAAAGCAACGGCCTATGCCGCTGTTGCCGAGGCAGGAACGTTGATGGTGGCAACACAGCCGACGGTC ATTTCCGGCGGAGCTGGATCGGCTGCGCTATCGCTTCCTGCGGACTGGTCACTTCTGCTGCCAATACACTCTCGCACAGT TGCTATGGCCTGTTAA
Upstream 100 bases:
>100_bases CCCTGCATGTTGGAGGCCAGCGCGTGCAAACGTTGGTGCATTGGTCGCGCTGCATGGGGGACATGCAGCGCGTCGCACGT ATCCATAGGGACAGGTATTC
Downstream 100 bases:
>100_bases CATTAATGTCTCGAGCGATTAAACTATTGGGCATGGAGATCACGCCAGCACAATTTGCACTCATCGAGCATTGCCTACCT TTGCAACGCGGCAATGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MKTCIAAVLLALPGLAVAQDVPLGYAVQGGMTLQEIDPAIYAYHYDHGFVGEDALGWDPALQFAWSRIAAAKVCAQQSPS DALIGKLVEQYGKDAVVHRINGIGFHEAQMRAAGTFCTPARVAEATAVAPAFAAGDFSKATAYAAVAEAGTLMVATQPTV ISGGAGSAALSLPADWSLLLPIHSRTVAMAC
Sequences:
>Translated_191_residues MKTCIAAVLLALPGLAVAQDVPLGYAVQGGMTLQEIDPAIYAYHYDHGFVGEDALGWDPALQFAWSRIAAAKVCAQQSPS DALIGKLVEQYGKDAVVHRINGIGFHEAQMRAAGTFCTPARVAEATAVAPAFAAGDFSKATAYAAVAEAGTLMVATQPTV ISGGAGSAALSLPADWSLLLPIHSRTVAMAC >Mature_191_residues MKTCIAAVLLALPGLAVAQDVPLGYAVQGGMTLQEIDPAIYAYHYDHGFVGEDALGWDPALQFAWSRIAAAKVCAQQSPS DALIGKLVEQYGKDAVVHRINGIGFHEAQMRAAGTFCTPARVAEATAVAPAFAAGDFSKATAYAAVAEAGTLMVATQPTV ISGGAGSAALSLPADWSLLLPIHSRTVAMAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19659; Mature: 19659
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTCIAAVLLALPGLAVAQDVPLGYAVQGGMTLQEIDPAIYAYHYDHGFVGEDALGWDPA CHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCHHHCCCEEEEEECCCCCCCCCCCCCCHH LQFAWSRIAAAKVCAQQSPSDALIGKLVEQYGKDAVVHRINGIGFHEAQMRAAGTFCTPA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHEEHHHCCCCCCHHHHHHCCCCCCHH RVAEATAVAPAFAAGDFSKATAYAAVAEAGTLMVATQPTVISGGAGSAALSLPADWSLLL HHHHHHHHCHHHHCCCCHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEECCCCCEEEE PIHSRTVAMAC EECCCEEEECC >Mature Secondary Structure MKTCIAAVLLALPGLAVAQDVPLGYAVQGGMTLQEIDPAIYAYHYDHGFVGEDALGWDPA CHHHHHHHHHHCCCHHHHHCCCCCEEEECCCCHHHCCCEEEEEECCCCCCCCCCCCCCHH LQFAWSRIAAAKVCAQQSPSDALIGKLVEQYGKDAVVHRINGIGFHEAQMRAAGTFCTPA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHEEHHHCCCCCCHHHHHHCCCCCCHH RVAEATAVAPAFAAGDFSKATAYAAVAEAGTLMVATQPTVISGGAGSAALSLPADWSLLL HHHHHHHHCHHHHCCCCHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEECCCCCEEEE PIHSRTVAMAC EECCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA