Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622327
Identifier: 84622327
GI number: 84622327
Start: 721886
End: 722455
Strand: Direct
Name: 84622327
Synonym: XOO_0670
Alternate gene names: NA
Gene position: 721886-722455 (Clockwise)
Preceding gene: 84622326
Following gene: 84622328
Centisome position: 14.61
GC content: 67.02
Gene sequence:
>570_bases ATGGCCCGCTCGATCGATGGCATTCGCGCTTACATAGTGACCGGCCTGTTGGCCGCCGGACTGCTGGGGTGCGCATTGCC GGCGCGCAGCCAGCCGCCGCTGGATCTGTTGATGGACCGCATCGTGCAGCGCAATGCCATCGGCGATGCAGTGGCGCTGA GCAAGTGGGACAGCGGCAAGCCGGTGCTGGATCAGGCGCGCGAGGCGGCGGTGTTGCAAAGGGTGCGCGATCAGGCGCCA GCGCACGGGCTAGATGCCGACGACGCGGCGCGCTTCTTTGGCCAGCAAATCGAAGCCAACAAGTCGGTGCAGTACGCGCT GTTGAACCGTTGGCACGAGCGCGGACGTGCGCCGGACACCGCACGTCCGGATCTCGCCGCGCTGCGCACACGCCTGGATC AACTGCAGGGCGAACTGCTCGATGCGCTGGCCGATGTGGCATCAGCGCGCAGCGCGCCCGACTGCCCCGCCAGCACGGCG CGTGCGGCATCGCATTACGCAAAGCAGTGGCAGCTGGATGCACTGCATCATGCAGCACTGGTGCGCGGCCTGGGCGATTT TTGCCACTGA
Upstream 100 bases:
>100_bases GAATCGACCGTGGCCTGTGGTAGGCACACTGCGTGCCTTGGCGCAGCGCTGCCCGGCAGTGGTGCATGGCAAAGTGATCC AGGTACGTTGAGGAACCTGT
Downstream 100 bases:
>100_bases TCCAGCGCGGTCGAACCGGTCTGCGATGCGCCACTCGCCGTCGTGCTGTTCAGAGCGGCTGACAAAACGGATAAGCGCTC TCCCAGTGGTGCGTGCGCTG
Product: chorismate mutase
Products: NA
Alternate protein names: Chorismate Mutase Protein; Secreted Chorismate Mutase; Chorismate Mutase Protein
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MARSIDGIRAYIVTGLLAAGLLGCALPARSQPPLDLLMDRIVQRNAIGDAVALSKWDSGKPVLDQAREAAVLQRVRDQAP AHGLDADDAARFFGQQIEANKSVQYALLNRWHERGRAPDTARPDLAALRTRLDQLQGELLDALADVASARSAPDCPASTA RAASHYAKQWQLDALHHAALVRGLGDFCH
Sequences:
>Translated_189_residues MARSIDGIRAYIVTGLLAAGLLGCALPARSQPPLDLLMDRIVQRNAIGDAVALSKWDSGKPVLDQAREAAVLQRVRDQAP AHGLDADDAARFFGQQIEANKSVQYALLNRWHERGRAPDTARPDLAALRTRLDQLQGELLDALADVASARSAPDCPASTA RAASHYAKQWQLDALHHAALVRGLGDFCH >Mature_188_residues ARSIDGIRAYIVTGLLAAGLLGCALPARSQPPLDLLMDRIVQRNAIGDAVALSKWDSGKPVLDQAREAAVLQRVRDQAPA HGLDADDAARFFGQQIEANKSVQYALLNRWHERGRAPDTARPDLAALRTRLDQLQGELLDALADVASARSAPDCPASTAR AASHYAKQWQLDALHHAALVRGLGDFCH
Specific function: Unknown
COG id: COG1605
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20400; Mature: 20269
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARSIDGIRAYIVTGLLAAGLLGCALPARSQPPLDLLMDRIVQRNAIGDAVALSKWDSGK CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PVLDQAREAAVLQRVRDQAPAHGLDADDAARFFGQQIEANKSVQYALLNRWHERGRAPDT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC ARPDLAALRTRLDQLQGELLDALADVASARSAPDCPASTARAASHYAKQWQLDALHHAAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VRGLGDFCH HHHHHHHCC >Mature Secondary Structure ARSIDGIRAYIVTGLLAAGLLGCALPARSQPPLDLLMDRIVQRNAIGDAVALSKWDSGK CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PVLDQAREAAVLQRVRDQAPAHGLDADDAARFFGQQIEANKSVQYALLNRWHERGRAPDT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC ARPDLAALRTRLDQLQGELLDALADVASARSAPDCPASTARAASHYAKQWQLDALHHAAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VRGLGDFCH HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA