Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622312
Identifier: 84622312
GI number: 84622312
Start: 707202
End: 707960
Strand: Direct
Name: 84622312
Synonym: XOO_0655
Alternate gene names: NA
Gene position: 707202-707960 (Clockwise)
Preceding gene: 84622311
Following gene: 84622313
Centisome position: 14.32
GC content: 65.48
Gene sequence:
>759_bases ATGACGATCAAGCCCGCAATCACGATGGCAGCCCGCGTGCTGCTAGGCCTGCTGGGCGCCGTAAGCGCAGCCAGTGCAGA CGACACGCACTGCGAGGTCAGCAGCGATGACGACCTCACGCTCAACCCGCGCAGCCTGATCCTGATCCGTGAATCAGGCA CGCCGCAACGCTTGGTCATGCGCCAGGGCGTCTTGTGCGTCGACGACCGCTGGGTGGAACCGAAAGCCGACGATCGCACC CGCCTGATTCAGTTCGAGCGCCAGATCCGGGATGGCGTGCCGCTGGCGCAGGCAGTGGGTCGCGCAGCGGCCGATATCGC AATCACTGCACTGGGCGAAGTGGCCGCTGGCTTCAGTCGCAACCCGGAGGCCACGCGTGCGCAGCTGGCAAACGTGCGCG AGAAGATCGACATACGCTTGAAGCAGAGTTTCAGCAAAAGCCAGCTGACCCTGGTCGAGATCGACGACGCCATCGGCGCG CTGGTGGCCGAGTTGCTGCCGCAGCTGATCGGCGATGTGGTGGCCGGTGCGGTGCAGTCCGCAATCACCGGGAACGACGT GCAGCTGCGTTCGCTCGATGGCCTGGAAGCGCGCATCGAGCGCCTGGTCGAACCGCAAGCGCGTGCATTGCGGCCGCGCG CGCAGCAGTGGTGCCGGCGCCTGGAAGCACTCGATGGGTTGGACAATGCGCTGGCGTATCGTTTGCCGTCGGGCGAGCCA CTGCAACTGTTGCGGGTCGATCGACGCACGGTGAAATGA
Upstream 100 bases:
>100_bases GATTGCGGATGCACACCGCTGGCACAGCTGCAGACGCGCGCGCTGCGTGCATCGGGGCCGCAGGCCGGACGTCATGCCAG CGCACAACGCAAGTGGCGAT
Downstream 100 bases:
>100_bases TCGGTGCACGCACGCATGCGGGCACTGCATCCCGCCGGCCGAGCGATTTTTGCACGGCAATGGTTGGCGCTGCGGCCCGC AGCCGGCCACAATAGGGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTIKPAITMAARVLLGLLGAVSAASADDTHCEVSSDDDLTLNPRSLILIRESGTPQRLVMRQGVLCVDDRWVEPKADDRT RLIQFERQIRDGVPLAQAVGRAAADIAITALGEVAAGFSRNPEATRAQLANVREKIDIRLKQSFSKSQLTLVEIDDAIGA LVAELLPQLIGDVVAGAVQSAITGNDVQLRSLDGLEARIERLVEPQARALRPRAQQWCRRLEALDGLDNALAYRLPSGEP LQLLRVDRRTVK
Sequences:
>Translated_252_residues MTIKPAITMAARVLLGLLGAVSAASADDTHCEVSSDDDLTLNPRSLILIRESGTPQRLVMRQGVLCVDDRWVEPKADDRT RLIQFERQIRDGVPLAQAVGRAAADIAITALGEVAAGFSRNPEATRAQLANVREKIDIRLKQSFSKSQLTLVEIDDAIGA LVAELLPQLIGDVVAGAVQSAITGNDVQLRSLDGLEARIERLVEPQARALRPRAQQWCRRLEALDGLDNALAYRLPSGEP LQLLRVDRRTVK >Mature_251_residues TIKPAITMAARVLLGLLGAVSAASADDTHCEVSSDDDLTLNPRSLILIRESGTPQRLVMRQGVLCVDDRWVEPKADDRTR LIQFERQIRDGVPLAQAVGRAAADIAITALGEVAAGFSRNPEATRAQLANVREKIDIRLKQSFSKSQLTLVEIDDAIGAL VAELLPQLIGDVVAGAVQSAITGNDVQLRSLDGLEARIERLVEPQARALRPRAQQWCRRLEALDGLDNALAYRLPSGEPL QLLRVDRRTVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27465; Mature: 27334
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIKPAITMAARVLLGLLGAVSAASADDTHCEVSSDDDLTLNPRSLILIRESGTPQRLVM CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEECCCEEEEEECCCCCHHHHH RQGVLCVDDRWVEPKADDRTRLIQFERQIRDGVPLAQAVGRAAADIAITALGEVAAGFSR HCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC NPEATRAQLANVREKIDIRLKQSFSKSQLTLVEIDDAIGALVAELLPQLIGDVVAGAVQS CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AITGNDVQLRSLDGLEARIERLVEPQARALRPRAQQWCRRLEALDGLDNALAYRLPSGEP HCCCCCEEEECCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHCCCHHHHEEECCCCCC LQLLRVDRRTVK HHHHHHHHHHCC >Mature Secondary Structure TIKPAITMAARVLLGLLGAVSAASADDTHCEVSSDDDLTLNPRSLILIRESGTPQRLVM CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCEECCCEEEEEECCCCCHHHHH RQGVLCVDDRWVEPKADDRTRLIQFERQIRDGVPLAQAVGRAAADIAITALGEVAAGFSR HCCCEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC NPEATRAQLANVREKIDIRLKQSFSKSQLTLVEIDDAIGALVAELLPQLIGDVVAGAVQS CCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH AITGNDVQLRSLDGLEARIERLVEPQARALRPRAQQWCRRLEALDGLDNALAYRLPSGEP HCCCCCEEEECCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHCCCHHHHEEECCCCCC LQLLRVDRRTVK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA