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The map label for this gene is yadH [H]

Identifier: 84622271

GI number: 84622271

Start: 667737

End: 668492

Strand: Direct

Name: yadH [H]

Synonym: XOO_0614

Alternate gene names: 84622271

Gene position: 667737-668492 (Clockwise)

Preceding gene: 84622270

Following gene: 84622272

Centisome position: 13.52

GC content: 60.98

Gene sequence:

>756_bases
GTGCATGCGATTGCGGCGATCTACCGTTTCGAAATGGCGCGCGCGTTCCGCACGCTCACGCAGTCGATCGCCTCGCCGGT
GTTGTCTACCTCGTTGTACTTCGTGGTGTTCGGCGCGGCGATCGGTGCGCGCATGGGCGATATCGACGGCATCAGCTATG
GCGCTTTCATCATTCCCGGGCTGGTGATGCTGTCGCTGCTCAACGAAAGCATTTCCAACGCGTCGTTCGGCATCTACATG
CCGCGCTGGGCCGGCACCATCTACGAGGTGCAGTCCGCGCCGGTGGCGTGGTGGGAGATCGTGATCGGCTACGTGGGGGC
GGCGGCGACCAAGTCGGTGATGCTGGGGCTGTTGATCCTGCTCACTGCGCGCCTATTCGTGCCGTACCAAATCGCCCATC
CGGTATGGATGCTGGGCTTTCTGGTGCTCACCGCACTGACCTTCAGCCTGTTCGGTTTCATCATCGGCATCTGGGCCGAT
GGTTTCGAAAAATTGCAGGTGATTCCGCTGATGGTGGTGACGCCGCTGACCTTCCTGGGCGGCAGTTTCTACTCGATCAA
TATGCTGCCGCCGCTGTGGCAGAAGGTCACGCTGTTCAACCCGGTGGTGTATCTGATCAGCGGCTTCCGCTGGAGTTTCT
ACGGCAAGGCCGATGTGCATATCGCGGTGAGCGCCGGCATGACCTTTCTGTTCCTGGTTGTGTGCCTTGGCGTGGCGGCG
GCGATCTTCCGCAGCGGCTATTGGCTCAACGCGTGA

Upstream 100 bases:

>100_bases
GCATCGACTTCAAGGACCTGCATTCCAGCGAGAGTTCGCTGGAAGAGATCTTCGTCAACCTGGTGCATGGCGCACGTCAA
CAGGAGGTGCGCGCCTGAAT

Downstream 100 bases:

>100_bases
GTGGTGAGTGCAGTGGTTTTGTCGGCCGCATCCTGGTGGATGCCGGCGGGAGTTCAGGTCAAACGCTGCGTGGGTCGCGT
GCGCGGTGCCCTCGCCGCTC

Product: ABC-2 type transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MHAIAAIYRFEMARAFRTLTQSIASPVLSTSLYFVVFGAAIGARMGDIDGISYGAFIIPGLVMLSLLNESISNASFGIYM
PRWAGTIYEVQSAPVAWWEIVIGYVGAAATKSVMLGLLILLTARLFVPYQIAHPVWMLGFLVLTALTFSLFGFIIGIWAD
GFEKLQVIPLMVVTPLTFLGGSFYSINMLPPLWQKVTLFNPVVYLISGFRWSFYGKADVHIAVSAGMTFLFLVVCLGVAA
AIFRSGYWLNA

Sequences:

>Translated_251_residues
MHAIAAIYRFEMARAFRTLTQSIASPVLSTSLYFVVFGAAIGARMGDIDGISYGAFIIPGLVMLSLLNESISNASFGIYM
PRWAGTIYEVQSAPVAWWEIVIGYVGAAATKSVMLGLLILLTARLFVPYQIAHPVWMLGFLVLTALTFSLFGFIIGIWAD
GFEKLQVIPLMVVTPLTFLGGSFYSINMLPPLWQKVTLFNPVVYLISGFRWSFYGKADVHIAVSAGMTFLFLVVCLGVAA
AIFRSGYWLNA
>Mature_251_residues
MHAIAAIYRFEMARAFRTLTQSIASPVLSTSLYFVVFGAAIGARMGDIDGISYGAFIIPGLVMLSLLNESISNASFGIYM
PRWAGTIYEVQSAPVAWWEIVIGYVGAAATKSVMLGLLILLTARLFVPYQIAHPVWMLGFLVLTALTFSLFGFIIGIWAD
GFEKLQVIPLMVVTPLTFLGGSFYSINMLPPLWQKVTLFNPVVYLISGFRWSFYGKADVHIAVSAGMTFLFLVVCLGVAA
AIFRSGYWLNA

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=249, Percent_Identity=37.3493975903614, Blast_Score=182, Evalue=1e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27524; Mature: 27524

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCCCCC
>Mature Secondary Structure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HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]