Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622227
Identifier: 84622227
GI number: 84622227
Start: 619318
End: 619707
Strand: Direct
Name: 84622227
Synonym: XOO_0570
Alternate gene names: NA
Gene position: 619318-619707 (Clockwise)
Preceding gene: 84622225
Following gene: 84622230
Centisome position: 12.54
GC content: 62.56
Gene sequence:
>390_bases ATGGAGGGCCTAGGTCTTGCCGCCCCCGGAATCTATGGCAGCGTCAGCACCTTGATCGCTGCGCTGGGCGGTATGGTGGC GTTGGCCGAGAAGATGGGGCCAAGGGTCACTATCATTGAGGTGGCCAAAGCGGGGACGAAGACGGAGATGTTTGCGGTGC TCAGTGCAGTCAGCGCTTCTATCTATCTCGGTGCTGCCGTGGGCAGTGCCGCAGTGGCGTCGGGTCGAACGCTTTCCTGC GGCACGAGTCTGTCGGACGTCCTGGCGTATTCCAGCCGCAATGGCCTGAGCAGCGATAGCGTGCGTACCGTCCTCATCAC CCGGCGCGAGATCTATGACTACAAGCGCCCGGGTCGTCGCTACTACGCCTCACTGGCGGCTGCGGTATGA
Upstream 100 bases:
>100_bases CCCAGCGCCGCTTCAAACACCTTGGCCGTCATCCCAATCCCCGCGTCAGTGGTAAACCAGCCGAAATCCTACCCACTCAA ATTTTCAGAGAGCCGAAAAC
Downstream 100 bases:
>100_bases GTGGCAGGATCAAGGATCGCCTGTTGCTGCTGGTGACGGCGTTTGTAGCCTCGGTACTTGGGTGGGCTTTCTGGCATTAC GTGGGCGAAGCGGCAGTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MEGLGLAAPGIYGSVSTLIAALGGMVALAEKMGPRVTIIEVAKAGTKTEMFAVLSAVSASIYLGAAVGSAAVASGRTLSC GTSLSDVLAYSSRNGLSSDSVRTVLITRREIYDYKRPGRRYYASLAAAV
Sequences:
>Translated_129_residues MEGLGLAAPGIYGSVSTLIAALGGMVALAEKMGPRVTIIEVAKAGTKTEMFAVLSAVSASIYLGAAVGSAAVASGRTLSC GTSLSDVLAYSSRNGLSSDSVRTVLITRREIYDYKRPGRRYYASLAAAV >Mature_129_residues MEGLGLAAPGIYGSVSTLIAALGGMVALAEKMGPRVTIIEVAKAGTKTEMFAVLSAVSASIYLGAAVGSAAVASGRTLSC GTSLSDVLAYSSRNGLSSDSVRTVLITRREIYDYKRPGRRYYASLAAAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13196; Mature: 13196
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGLGLAAPGIYGSVSTLIAALGGMVALAEKMGPRVTIIEVAKAGTKTEMFAVLSAVSAS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH IYLGAAVGSAAVASGRTLSCGTSLSDVLAYSSRNGLSSDSVRTVLITRREIYDYKRPGRR HHHHHHHCHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCCEEHEEHHHHHHHCCCCHHH YYASLAAAV HHHHHHHCC >Mature Secondary Structure MEGLGLAAPGIYGSVSTLIAALGGMVALAEKMGPRVTIIEVAKAGTKTEMFAVLSAVSAS CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHH IYLGAAVGSAAVASGRTLSCGTSLSDVLAYSSRNGLSSDSVRTVLITRREIYDYKRPGRR HHHHHHHCHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCCEEHEEHHHHHHHCCCCHHH YYASLAAAV HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA