Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622099
Identifier: 84622099
GI number: 84622099
Start: 484150
End: 484644
Strand: Direct
Name: 84622099
Synonym: XOO_0442
Alternate gene names: NA
Gene position: 484150-484644 (Clockwise)
Preceding gene: 84622098
Following gene: 84622100
Centisome position: 9.8
GC content: 64.85
Gene sequence:
>495_bases ATGCGCATCCTCCTCGCCCACACCTCGCTCAGCGGCAACACGCGCGACGTAGCGCGTGCGATCCACGCGCGCTGCGAGGA ACTAGGTCACGCGGTGACCTGGATCGATGCCGACATCCAGACGCTGGCGCAGGCCTGCCCAAACGGCGCCGAGCACGATC TCTACATCCTCGGCAGCTGGAGTATCAACGCCGGGCGTACGCCGCCGGAAATGAAACGCTTCATCGAACAGCTCGTCAAA GCGGTCGGCAAGCCGGAACGCCTGGCGGTGTTCGGCACTGGTGAGACGCAGTGGGGAGAAGAGAACTACTGCGGTGCGGC CCGGCGCATGGCTGCATTCTTCGGCACGCGCTACCCGCGGCTGGAGATCGAACAGATGCCCCACGGCGAACGCGACGCCA CCAAGATCCAGCGCTGGACCGACCACATTCTTGCCCTCACCGATACACCGTTCGAGAACATCCCCCATGCAGACGCTCCA CGCCACCACCCCTGA
Upstream 100 bases:
>100_bases CACTTCGTATCGTTGTCCGAGTCTTTTGGGGTCAGCATCGAAGCAATGGCCATTCGCCTTGAAGAATTGAAACTCGTTAT TGAGTAATTGCTTCTCCGAG
Downstream 100 bases:
>100_bases CGACTACGCCGCTGCCCTGGCCGCGCATCCGCGTTTACTGGTCGACTATTACAAGGACAATTGCCCTGGCTGCAAGATGC TCGACATGTCGCTGACCAAG
Product: flavodoxin
Products: NA
Alternate protein names: Flavodoxin Protein
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MRILLAHTSLSGNTRDVARAIHARCEELGHAVTWIDADIQTLAQACPNGAEHDLYILGSWSINAGRTPPEMKRFIEQLVK AVGKPERLAVFGTGETQWGEENYCGAARRMAAFFGTRYPRLEIEQMPHGERDATKIQRWTDHILALTDTPFENIPHADAP RHHP
Sequences:
>Translated_164_residues MRILLAHTSLSGNTRDVARAIHARCEELGHAVTWIDADIQTLAQACPNGAEHDLYILGSWSINAGRTPPEMKRFIEQLVK AVGKPERLAVFGTGETQWGEENYCGAARRMAAFFGTRYPRLEIEQMPHGERDATKIQRWTDHILALTDTPFENIPHADAP RHHP >Mature_164_residues MRILLAHTSLSGNTRDVARAIHARCEELGHAVTWIDADIQTLAQACPNGAEHDLYILGSWSINAGRTPPEMKRFIEQLVK AVGKPERLAVFGTGETQWGEENYCGAARRMAAFFGTRYPRLEIEQMPHGERDATKIQRWTDHILALTDTPFENIPHADAP RHHP
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18432; Mature: 18432
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLAHTSLSGNTRDVARAIHARCEELGHAVTWIDADIQTLAQACPNGAEHDLYILGSW CEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCCCEEEEEEC SINAGRTPPEMKRFIEQLVKAVGKPERLAVFGTGETQWGEENYCGAARRMAAFFGTRYPR CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC LEIEQMPHGERDATKIQRWTDHILALTDTPFENIPHADAPRHHP EECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure MRILLAHTSLSGNTRDVARAIHARCEELGHAVTWIDADIQTLAQACPNGAEHDLYILGSW CEEEEEECCCCCCHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHCCCCCCCCEEEEEEC SINAGRTPPEMKRFIEQLVKAVGKPERLAVFGTGETQWGEENYCGAARRMAAFFGTRYPR CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCC LEIEQMPHGERDATKIQRWTDHILALTDTPFENIPHADAPRHHP EECCCCCCCCHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA