Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622098
Identifier: 84622098
GI number: 84622098
Start: 483297
End: 484136
Strand: Direct
Name: 84622098
Synonym: XOO_0441
Alternate gene names: NA
Gene position: 483297-484136 (Clockwise)
Preceding gene: 84622097
Following gene: 84622099
Centisome position: 9.78
GC content: 51.79
Gene sequence:
>840_bases ATGAGCAAGCGATTGGATCCACGCATCTTGTCTAGTCGCATGCGGCTGCAGAACCCGTACGCGCACATGGAAGAAATTGA AGAGTGCTGGCGGCAAGGGGGTGATGATCAGAGTCGGTATCGCTTTGCGAGATCGTACGGAAAGCCGTTCTCTAAAAAGA GAAGTCATAGCTTTGAGTCGATAGAGGCACAGGCTAAGGAGTTGCAACGCGCGATTTGGAAGAAGCGGACAGATCTCGGC CTGAGTCAAAACGTGCACCCGATTAACGTCTTAGATCCGCAGCTTGCCGCGGAGCTGCTGGGCTTCGACCTCACCTTTCA TTCTAGTCTTGGCGAGATGGCCAGCGGCCGCCGCAGAGTTTCGGTTGCGGGGCTAATTGATCAATCGGCTCGATCCATCA AAATCGCAACAGATGCTGACCCGAGAGTCATGCGTTTCACTGCGGCTCATGAGATCGGTCACGCAATTCTTCACCCCGAT CAAACAGGGTTGCATCGGGATCAGCCATTAAACGAAGTTCGGCAAGTGCGCATTCGAACCGAGCTTGAGGCGGATAAGTT CGCGACTTATTTTCTGCTGCCAGAGAAACTTCTCACTGAAGAATTTAAATCGCGTTTTCTGGGTGTTTTCGCCCTGGATG AGCAGACCGCCTTTGCTCTGCTGAGCAAGCCTATTTTCGAAGTGATCGAAGCTCTTCCAACTCTCCGCGACGTCTCTAGG AGACTGGCGAGTTCGACTTATTACAACGGCTCCCACTTCGTATCGTTGTCCGAGTCTTTTGGGGTCAGCATCGAAGCAAT GGCCATTCGCCTTGAAGAATTGAAACTCGTTATTGAGTAA
Upstream 100 bases:
>100_bases ATGCCTCGTACAAGAAGACTAATTCGGATAATGGCTTCGACGACCTCTGACGCGGAACTATCAATACCTCTCAAGTAATT CCACTTAGTACGGGGGCACC
Downstream 100 bases:
>100_bases TTGCTTCTCCGAGATGCGCATCCTCCTCGCCCACACCTCGCTCAGCGGCAACACGCGCGACGTAGCGCGTGCGATCCACG CGCGCTGCGAGGAACTAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSKRLDPRILSSRMRLQNPYAHMEEIEECWRQGGDDQSRYRFARSYGKPFSKKRSHSFESIEAQAKELQRAIWKKRTDLG LSQNVHPINVLDPQLAAELLGFDLTFHSSLGEMASGRRRVSVAGLIDQSARSIKIATDADPRVMRFTAAHEIGHAILHPD QTGLHRDQPLNEVRQVRIRTELEADKFATYFLLPEKLLTEEFKSRFLGVFALDEQTAFALLSKPIFEVIEALPTLRDVSR RLASSTYYNGSHFVSLSESFGVSIEAMAIRLEELKLVIE
Sequences:
>Translated_279_residues MSKRLDPRILSSRMRLQNPYAHMEEIEECWRQGGDDQSRYRFARSYGKPFSKKRSHSFESIEAQAKELQRAIWKKRTDLG LSQNVHPINVLDPQLAAELLGFDLTFHSSLGEMASGRRRVSVAGLIDQSARSIKIATDADPRVMRFTAAHEIGHAILHPD QTGLHRDQPLNEVRQVRIRTELEADKFATYFLLPEKLLTEEFKSRFLGVFALDEQTAFALLSKPIFEVIEALPTLRDVSR RLASSTYYNGSHFVSLSESFGVSIEAMAIRLEELKLVIE >Mature_278_residues SKRLDPRILSSRMRLQNPYAHMEEIEECWRQGGDDQSRYRFARSYGKPFSKKRSHSFESIEAQAKELQRAIWKKRTDLGL SQNVHPINVLDPQLAAELLGFDLTFHSSLGEMASGRRRVSVAGLIDQSARSIKIATDADPRVMRFTAAHEIGHAILHPDQ TGLHRDQPLNEVRQVRIRTELEADKFATYFLLPEKLLTEEFKSRFLGVFALDEQTAFALLSKPIFEVIEALPTLRDVSRR LASSTYYNGSHFVSLSESFGVSIEAMAIRLEELKLVIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31860; Mature: 31729
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRLDPRILSSRMRLQNPYAHMEEIEECWRQGGDDQSRYRFARSYGKPFSKKRSHSFES CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHHH IEAQAKELQRAIWKKRTDLGLSQNVHPINVLDPQLAAELLGFDLTFHSSLGEMASGRRRV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEE SVAGLIDQSARSIKIATDADPRVMRFTAAHEIGHAILHPDQTGLHRDQPLNEVRQVRIRT EHHHHHHCCCCEEEEECCCCCHHEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH ELEADKFATYFLLPEKLLTEEFKSRFLGVFALDEQTAFALLSKPIFEVIEALPTLRDVSR HHCHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH RLASSTYYNGSHFVSLSESFGVSIEAMAIRLEELKLVIE HHHHCCCCCCCEEEEECHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SKRLDPRILSSRMRLQNPYAHMEEIEECWRQGGDDQSRYRFARSYGKPFSKKRSHSFES CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCHHH IEAQAKELQRAIWKKRTDLGLSQNVHPINVLDPQLAAELLGFDLTFHSSLGEMASGRRRV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCEE SVAGLIDQSARSIKIATDADPRVMRFTAAHEIGHAILHPDQTGLHRDQPLNEVRQVRIRT EHHHHHHCCCCEEEEECCCCCHHEEEHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH ELEADKFATYFLLPEKLLTEEFKSRFLGVFALDEQTAFALLSKPIFEVIEALPTLRDVSR HHCHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH RLASSTYYNGSHFVSLSESFGVSIEAMAIRLEELKLVIE HHHHCCCCCCCEEEEECHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA