Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is yjeS [C]
Identifier: 84489381
GI number: 84489381
Start: 660595
End: 661272
Strand: Direct
Name: yjeS [C]
Synonym: Msp_0571
Alternate gene names: 84489381
Gene position: 660595-661272 (Clockwise)
Preceding gene: 84489380
Following gene: 84489383
Centisome position: 37.38
GC content: 29.2
Gene sequence:
>678_bases ATGTTAATGGATTATGTTAAATCATTAAGTGATGTTTGTGGAGTTGCAGATTTTAGAAAAGATAGTCAACAGTTAATTGA AACATATGGTCAAGATATATGTAAATATCCATATGCAATTGTTATAGGTCATAGATTAAATGAAGAGATTGTATCTAAAA TACCCTTATCATATAATGATGATGATATAGCAGAAGAATATCAAAATGAATACTTTAATTCATTTAAAAGAATATCTGGT ATCTCCCATAAAGTTGAGGATTATATTCATGATTTAGGATATAACTGTGTAATATTAAATGAATTGGAAAAATATGAAGA TATACATCTAAAGACTAGATTTAGTAATAAAGCCAGTGCAAAACTTGCAGGAATTGGTTGGATTGGAAAAAATAATCTCT TAACAACAAGAGAATATGGTCCAAGACTCACATGGTCAACAATTATAACAGATGCTCCACTTAGTAAATACACAGGAAAT GTTATGGAATCATTATGTGGGGATTGTAATATATGTGTTAAAGCATGTCCTGGTGGAGCAATAGTTAACTTAGATAATCC ACGCAAATCATACAGTCCAATAAAATGTGGGGATTATATTAAAAGTAGAAAAAAAGAGGGACATCCAACAGTATGTGGTA TGTGTTTATATATATGTCCATATGGGAATAAAATATGA
Upstream 100 bases:
>100_bases ATCAACACAAACAGATCATTATATAAAAGATTACTATAACATACCACATGATGAAGATATTGGAACTATAATAATAGGAT TTACTCCAAGGTGTTAAATT
Downstream 100 bases:
>100_bases TTTTTTTATTCTTTTTTATCCTCTTTTAGTGTTTCATAAATTGTTTTTGCTAATTTTTGATTAATACCTTTTACTTGACA TATTTCATCAAAACTTGCAT
Product: Fe-S protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLMDYVKSLSDVCGVADFRKDSQQLIETYGQDICKYPYAIVIGHRLNEEIVSKIPLSYNDDDIAEEYQNEYFNSFKRISG ISHKVEDYIHDLGYNCVILNELEKYEDIHLKTRFSNKASAKLAGIGWIGKNNLLTTREYGPRLTWSTIITDAPLSKYTGN VMESLCGDCNICVKACPGGAIVNLDNPRKSYSPIKCGDYIKSRKKEGHPTVCGMCLYICPYGNKI
Sequences:
>Translated_225_residues MLMDYVKSLSDVCGVADFRKDSQQLIETYGQDICKYPYAIVIGHRLNEEIVSKIPLSYNDDDIAEEYQNEYFNSFKRISG ISHKVEDYIHDLGYNCVILNELEKYEDIHLKTRFSNKASAKLAGIGWIGKNNLLTTREYGPRLTWSTIITDAPLSKYTGN VMESLCGDCNICVKACPGGAIVNLDNPRKSYSPIKCGDYIKSRKKEGHPTVCGMCLYICPYGNKI >Mature_225_residues MLMDYVKSLSDVCGVADFRKDSQQLIETYGQDICKYPYAIVIGHRLNEEIVSKIPLSYNDDDIAEEYQNEYFNSFKRISG ISHKVEDYIHDLGYNCVILNELEKYEDIHLKTRFSNKASAKLAGIGWIGKNNLLTTREYGPRLTWSTIITDAPLSKYTGN VMESLCGDCNICVKACPGGAIVNLDNPRKSYSPIKCGDYIKSRKKEGHPTVCGMCLYICPYGNKI
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25425; Mature: 25425
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMDYVKSLSDVCGVADFRKDSQQLIETYGQDICKYPYAIVIGHRLNEEIVSKIPLSYND CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCC DDIAEEYQNEYFNSFKRISGISHKVEDYIHDLGYNCVILNELEKYEDIHLKTRFSNKASA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECHHHHHHHHEEEEECCCCCCC KLAGIGWIGKNNLLTTREYGPRLTWSTIITDAPLSKYTGNVMESLCGDCNICVKACPGGA EEEEEEEECCCCCEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCE IVNLDNPRKSYSPIKCGDYIKSRKKEGHPTVCGMCLYICPYGNKI EEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MLMDYVKSLSDVCGVADFRKDSQQLIETYGQDICKYPYAIVIGHRLNEEIVSKIPLSYND CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCC DDIAEEYQNEYFNSFKRISGISHKVEDYIHDLGYNCVILNELEKYEDIHLKTRFSNKASA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEECHHHHHHHHEEEEECCCCCCC KLAGIGWIGKNNLLTTREYGPRLTWSTIITDAPLSKYTGNVMESLCGDCNICVKACPGGA EEEEEEEECCCCCEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCCCE IVNLDNPRKSYSPIKCGDYIKSRKKEGHPTVCGMCLYICPYGNKI EEECCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA