Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489379
Identifier: 84489379
GI number: 84489379
Start: 659447
End: 660007
Strand: Direct
Name: 84489379
Synonym: Msp_0569
Alternate gene names: NA
Gene position: 659447-660007 (Clockwise)
Preceding gene: 84489378
Following gene: 84489380
Centisome position: 37.31
GC content: 28.52
Gene sequence:
>561_bases ATGATAGAAGATAAATTATTTGATATTATTAAAAATGAAGGTAACATAATAGTATCAGATATTATGACTGATGAAATGAA AAAGGAAGTTATTAAATTAGAAATGAAAAGATTAGATGAAATGGTACCATTGATTAATAAGGGTTTACAAGAAGCATTTG ATTTAGATTCATCTATTGTTATTATTCAAGATAAGACAAATATCACACTACCTGTTGAGGAATTAATTCCTACATTAACT CTACAATCAGAAAGTGGTACAATTATAGGGGAAGAGATATATGATCCTGAGGAATTGGAAGAAATAAGACAAGATCCTTC AGTATATTTTATATCTGATAATTTTCCAACCTATCCTAATCTATCAGTTCCAGGAGAAAAACAGTTTTTTGTAGTATCTG AAACAATAGGTATGCTTAAATGTGAGGATAGATTAAGAAGTGCTGTTAGTAAGATGATTATTGCAGCACCATCTACTGAG GCTGATGGTTATATTAAGGATTGTTATAACATTCCACATGAAGAAAAAATCACAACACTAATAATAGGATTTAATAAGTA G
Upstream 100 bases:
>100_bases TCTGTTGGTGGAAATAAGCCTTCAAGTGGTGATAGTGAAGATGTTTATAAAAAAGCAAGAGATATAGGCTTAAATCTATA ATTTATAATGGTGGGTACAT
Downstream 100 bases:
>100_bases GGAATGATTTTATGGATAATGAATATGAAATAGTTTCAATGTTAAAAGAGGATGATGGAGTACTAATTTCACAGTTAATA GATAATGACTTTAAAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MIEDKLFDIIKNEGNIIVSDIMTDEMKKEVIKLEMKRLDEMVPLINKGLQEAFDLDSSIVIIQDKTNITLPVEELIPTLT LQSESGTIIGEEIYDPEELEEIRQDPSVYFISDNFPTYPNLSVPGEKQFFVVSETIGMLKCEDRLRSAVSKMIIAAPSTE ADGYIKDCYNIPHEEKITTLIIGFNK
Sequences:
>Translated_186_residues MIEDKLFDIIKNEGNIIVSDIMTDEMKKEVIKLEMKRLDEMVPLINKGLQEAFDLDSSIVIIQDKTNITLPVEELIPTLT LQSESGTIIGEEIYDPEELEEIRQDPSVYFISDNFPTYPNLSVPGEKQFFVVSETIGMLKCEDRLRSAVSKMIIAAPSTE ADGYIKDCYNIPHEEKITTLIIGFNK >Mature_186_residues MIEDKLFDIIKNEGNIIVSDIMTDEMKKEVIKLEMKRLDEMVPLINKGLQEAFDLDSSIVIIQDKTNITLPVEELIPTLT LQSESGTIIGEEIYDPEELEEIRQDPSVYFISDNFPTYPNLSVPGEKQFFVVSETIGMLKCEDRLRSAVSKMIIAAPSTE ADGYIKDCYNIPHEEKITTLIIGFNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21122; Mature: 21122
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEDKLFDIIKNEGNIIVSDIMTDEMKKEVIKLEMKRLDEMVPLINKGLQEAFDLDSSIV CCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE IIQDKTNITLPVEELIPTLTLQSESGTIIGEEIYDPEELEEIRQDPSVYFISDNFPTYPN EEECCCCEEEEHHHHCCEEEEECCCCCEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCC LSVPGEKQFFVVSETIGMLKCEDRLRSAVSKMIIAAPSTEADGYIKDCYNIPHEEKITTL CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHCCCCCCCEEEE IIGFNK EEEECC >Mature Secondary Structure MIEDKLFDIIKNEGNIIVSDIMTDEMKKEVIKLEMKRLDEMVPLINKGLQEAFDLDSSIV CCCHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE IIQDKTNITLPVEELIPTLTLQSESGTIIGEEIYDPEELEEIRQDPSVYFISDNFPTYPN EEECCCCEEEEHHHHCCEEEEECCCCCEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCC LSVPGEKQFFVVSETIGMLKCEDRLRSAVSKMIIAAPSTEADGYIKDCYNIPHEEKITTL CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHCCCCCCCEEEE IIGFNK EEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA