Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489370
Identifier: 84489370
GI number: 84489370
Start: 652251
End: 652991
Strand: Direct
Name: 84489370
Synonym: Msp_0560
Alternate gene names: NA
Gene position: 652251-652991 (Clockwise)
Preceding gene: 84489369
Following gene: 84489371
Centisome position: 36.9
GC content: 27.4
Gene sequence:
>741_bases ATGTTAAATAAAGATCATCCTAGATATCAATCATTAGTATATAGAGAAAAAATTGTAGAAGCACATGAAAATGGAATCCT TGCAGATTCTGGTATGATAGCTCATGGACGTGGAGAGACATTTGATTATTTAATTGGTGAAAAAACAACTCCCAACTCAC AAAATACTATTGATGTAGCAGCATGCTATTTTTTAACAAGAAAACATCCAGTTTTAAGTGTAAATGGTAATACTACAGCT TTAGTAAGTGAAGATATAGCTAAATTATCAGAATTATTGGATATTCCAGTAGAAATTAATTTATATTACAGAACACCTGA ACGAATAGAAAATATAGAAAGAGTATATAAGGATTTGGGTGTGAAAGAAATTTTAGGTACTGATGAAGATGATTTTATAG ACACTCCTAATCTTAATGGTCCAAGATCACCTGTGAGTATTGAAGGTATTAAAAAATCAGATTTAGTTTTTATTCCATTA GAAGATGGAGATAGAGCAGAAAAACTATATGATTTAGGTAAAGACATAATAAGTGTTGATTTAAATCCATTATCTAGAAC AGCACAAACATCAACAGTAACAATAGTAGATAATATTGTAAGAGTAATACCGGCATTAATTGAATCTGTAAAAAAATATG AAAACTATGATAAAACTGACATCCAAGAAAAAATAGATCTATTTAATAATAAAACTAATTTAAATATAGCAATAAAGGAT ATTATAAAAAGATTTGAATAA
Upstream 100 bases:
>100_bases TCAAATATTTACATTCTATTTTTTCTAATTAATATTAAACAATAAATTTTTCCACATATATACTAAACTTCTAAATATTA GAAAGTACTTATCTTATTAT
Downstream 100 bases:
>100_bases AACAAGAAGGAGTAGTAATATTGAAAGTTTTTGGAGTAACAGGTCTTCCAGGTTCTGGTAAAAGTATTATTTCACGTATA GCTAAAAAAGAGGGAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVAACYFLTRKHPVLSVNGNTTA LVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLGVKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPL EDGDRAEKLYDLGKDIISVDLNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD IIKRFE
Sequences:
>Translated_246_residues MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVAACYFLTRKHPVLSVNGNTTA LVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLGVKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPL EDGDRAEKLYDLGKDIISVDLNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD IIKRFE >Mature_246_residues MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVAACYFLTRKHPVLSVNGNTTA LVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLGVKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPL EDGDRAEKLYDLGKDIISVDLNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD IIKRFE
Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent and ADP-producing reaction [H]
COG id: COG1701
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal pantothenate synthetase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002855 - ProDom: PD016827 [H]
Pfam domain/function: PF02006 DUF137 [H]
EC number: NA
Molecular weight: Translated: 27823; Mature: 27823
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVA CCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECCCCCCEEHCCCCCCCCCCCCHHHHH ACYFLTRKHPVLSVNGNTTALVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLG HHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCC VKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPLEDGDRAEKLYDLGKDIISVD HHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCHHHHHHHHCHHHEEEC LNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEHHH IIKRFE HHHHCC >Mature Secondary Structure MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVA CCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECCCCCCEEHCCCCCCCCCCCCHHHHH ACYFLTRKHPVLSVNGNTTALVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLG HHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCC VKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPLEDGDRAEKLYDLGKDIISVD HHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCHHHHHHHHCHHHEEEC LNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEHHH IIKRFE HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]