Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489364
Identifier: 84489364
GI number: 84489364
Start: 646648
End: 647118
Strand: Direct
Name: 84489364
Synonym: Msp_0554
Alternate gene names: NA
Gene position: 646648-647118 (Clockwise)
Preceding gene: 84489363
Following gene: 84489365
Centisome position: 36.59
GC content: 26.33
Gene sequence:
>471_bases TTGAAGAGTATAATCATTTACTATTCAAGAACAGGAAGAACTAAACTTATTGCACAGACACTTGCAAAGGAAAAAAATAT GAATATAGTGGAAATTAAAGATAAAACTAATAGATCTGGTGCAATAGGTTTTATAAAAGGAACTTTAGATTCTATGATAA ATAATAGTACTACAATAGAACCTGTAACAATTGATTTAGATAAATATGATACAGTATATATTGGTACACCTGTTTGGGCA TCAAAAATAACTCCTGCAATAAAGCAAATACTGGATAATATTAACCTAGAAAATAAAAATGTAATAACATTTGTAACATT AAATAAAAATGGTGCAAAAGAGGCATTGAATTCTCTAAATTCCACAATAAAAGATAAAGGTGGAAAAATAATAAATTCCT TTTCTATAATAACAAAAGGGAGGGATATTGAATCCTTAACTAAAGATATAGTAAAAAACTTGGGGAAATAA
Upstream 100 bases:
>100_bases GTCTAAAAGAGTATTATTTATACAAGTTTAGGTATAACTAATAATTGTAGTATTAAAAATAAATTTCTAAAAAAAATATA ATTTAAAGGAGGCATGCTTT
Downstream 100 bases:
>100_bases AATGAGAAGTATTGTAATATTCTATTCAAAATCTGGAAATACTTTAACAGTTGCAAATACTATAAAGAAATTATTAGGTG CACATACAAAAGAAATAACT
Product: hypothetical protein
Products: NA
Alternate protein names: ArsR Family Transcriptional Regulator; Flavodoxin/Nitric Oxide Synthase; Flavodoxin FldA; Flavodoxin Related Protein
Number of amino acids: Translated: 156; Mature: 156
Protein sequence:
>156_residues MKSIIIYYSRTGRTKLIAQTLAKEKNMNIVEIKDKTNRSGAIGFIKGTLDSMINNSTTIEPVTIDLDKYDTVYIGTPVWA SKITPAIKQILDNINLENKNVITFVTLNKNGAKEALNSLNSTIKDKGGKIINSFSIITKGRDIESLTKDIVKNLGK
Sequences:
>Translated_156_residues MKSIIIYYSRTGRTKLIAQTLAKEKNMNIVEIKDKTNRSGAIGFIKGTLDSMINNSTTIEPVTIDLDKYDTVYIGTPVWA SKITPAIKQILDNINLENKNVITFVTLNKNGAKEALNSLNSTIKDKGGKIINSFSIITKGRDIESLTKDIVKNLGK >Mature_156_residues MKSIIIYYSRTGRTKLIAQTLAKEKNMNIVEIKDKTNRSGAIGFIKGTLDSMINNSTTIEPVTIDLDKYDTVYIGTPVWA SKITPAIKQILDNINLENKNVITFVTLNKNGAKEALNSLNSTIKDKGGKIINSFSIITKGRDIESLTKDIVKNLGK
Specific function: Unknown
COG id: COG0716
COG function: function code C; Flavodoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17248; Mature: 17248
Theoretical pI: Translated: 10.37; Mature: 10.37
Prosite motif: PS00201 FLAVODOXIN ; PS50902 FLAVODOXIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIIIYYSRTGRTKLIAQTLAKEKNMNIVEIKDKTNRSGAIGFIKGTLDSMINNSTTIE CCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCE PVTIDLDKYDTVYIGTPVWASKITPAIKQILDNINLENKNVITFVTLNKNGAKEALNSLN EEEEECCCCCEEEEECCCCHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHH STIKDKGGKIINSFSIITKGRDIESLTKDIVKNLGK HHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKSIIIYYSRTGRTKLIAQTLAKEKNMNIVEIKDKTNRSGAIGFIKGTLDSMINNSTTIE CCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEHHHHHHHHCCCCCCE PVTIDLDKYDTVYIGTPVWASKITPAIKQILDNINLENKNVITFVTLNKNGAKEALNSLN EEEEECCCCCEEEEECCCCHHHCCHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHH STIKDKGGKIINSFSIITKGRDIESLTKDIVKNLGK HHHHHCCCEEEEEEEEEECCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA