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The map label for this gene is ybfF [C]

Identifier: 84489351

GI number: 84489351

Start: 636091

End: 636798

Strand: Direct

Name: ybfF [C]

Synonym: Msp_0541

Alternate gene names: 84489351

Gene position: 636091-636798 (Clockwise)

Preceding gene: 84489350

Following gene: 84489352

Centisome position: 35.99

GC content: 30.08

Gene sequence:

>708_bases
ATGAACAAAGAAGACATACCACCAATAACATCAAGTATATATATTGTTTTATCCTGTTACAATGAAGAAGAAACACTTGA
AGAAGTAACAACAGAACTTGTTAAACGTGGATTTAAGGTTTTAATTATAGATGATGGATCAGTAGACAGTAGTCCAGAGA
TAGCAAAGAAATTAGTTGATAAATTCTCACCCATGGTATATCTCTACAGACATACTATTAATGTTGGATTAGGGGGAGCT
ATTAAAACTGGAATAAAAGCAGCCCTAAGTAAAAATGCTGATATAATAATTACATTTGATGCAGATGGACAACATAATCC
AGATGACTTGTATAATATGTATCCACCTCTACAAGATGGAAGTGCAGATGTTGTTATAGCTTCAAGGGATTTTAATGACA
TGCCAAAGGGTAGACGTTTTGGAAATACTGTTATGAACTATATAACATATATATTTCAGGGAAAAATGGTTACTGATTCA
CAATCAGGTCTTAGAGCATTTACAAATGAAGCAGCACGTAAATTAAATCTAAAATCTCCACAATATGGTGTATCATCTGA
AATTATTGGTGAAATAAAAAGACGTAATTTAAGATTAAAAGAAGTACCAATGACTACAATATATGATAAAAGAACAATAG
AAAAGGGTACAAATACAATTGTAGGATTAAAAATTATATTAGAATTTCTTAATGAAACATTCAAATAA

Upstream 100 bases:

>100_bases
TCAATTTTACTTTAAAATATAAAAATAATGTTTAATATATATAGTAACAGAATTTTAAAAATATTAAATTAATAAAAACA
CAACACAGGACACGAAGAAA

Downstream 100 bases:

>100_bases
TAGGGGAGATTTACAATGGAATTATATCAAATAATAATTATTGTAGTTAGTGTTGCTGTTATTTTATTGGTAAGTAAACG
TTTTCGTAACGATACACTTA

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MNKEDIPPITSSIYIVLSCYNEEETLEEVTTELVKRGFKVLIIDDGSVDSSPEIAKKLVDKFSPMVYLYRHTINVGLGGA
IKTGIKAALSKNADIIITFDADGQHNPDDLYNMYPPLQDGSADVVIASRDFNDMPKGRRFGNTVMNYITYIFQGKMVTDS
QSGLRAFTNEAARKLNLKSPQYGVSSEIIGEIKRRNLRLKEVPMTTIYDKRTIEKGTNTIVGLKIILEFLNETFK

Sequences:

>Translated_235_residues
MNKEDIPPITSSIYIVLSCYNEEETLEEVTTELVKRGFKVLIIDDGSVDSSPEIAKKLVDKFSPMVYLYRHTINVGLGGA
IKTGIKAALSKNADIIITFDADGQHNPDDLYNMYPPLQDGSADVVIASRDFNDMPKGRRFGNTVMNYITYIFQGKMVTDS
QSGLRAFTNEAARKLNLKSPQYGVSSEIIGEIKRRNLRLKEVPMTTIYDKRTIEKGTNTIVGLKIILEFLNETFK
>Mature_235_residues
MNKEDIPPITSSIYIVLSCYNEEETLEEVTTELVKRGFKVLIIDDGSVDSSPEIAKKLVDKFSPMVYLYRHTINVGLGGA
IKTGIKAALSKNADIIITFDADGQHNPDDLYNMYPPLQDGSADVVIASRDFNDMPKGRRFGNTVMNYITYIFQGKMVTDS
QSGLRAFTNEAARKLNLKSPQYGVSSEIIGEIKRRNLRLKEVPMTTIYDKRTIEKGTNTIVGLKIILEFLNETFK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 26371; Mature: 26371

Theoretical pI: Translated: 6.56; Mature: 6.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKEDIPPITSSIYIVLSCYNEEETLEEVTTELVKRGFKVLIIDDGSVDSSPEIAKKLVD
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHH
KFSPMVYLYRHTINVGLGGAIKTGIKAALSKNADIIITFDADGQHNPDDLYNMYPPLQDG
HHCHHEEEEEHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCCCCCCC
SADVVIASRDFNDMPKGRRFGNTVMNYITYIFQGKMVTDSQSGLRAFTNEAARKLNLKSP
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCC
QYGVSSEIIGEIKRRNLRLKEVPMTTIYDKRTIEKGTNTIVGLKIILEFLNETFK
CCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNKEDIPPITSSIYIVLSCYNEEETLEEVTTELVKRGFKVLIIDDGSVDSSPEIAKKLVD
CCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHH
KFSPMVYLYRHTINVGLGGAIKTGIKAALSKNADIIITFDADGQHNPDDLYNMYPPLQDG
HHCHHEEEEEHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCCCCCCC
SADVVIASRDFNDMPKGRRFGNTVMNYITYIFQGKMVTDSQSGLRAFTNEAARKLNLKSP
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHCCCCCC
QYGVSSEIIGEIKRRNLRLKEVPMTTIYDKRTIEKGTNTIVGLKIILEFLNETFK
CCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]