Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is mod [H]
Identifier: 84489281
GI number: 84489281
Start: 551194
End: 552375
Strand: Direct
Name: mod [H]
Synonym: Msp_0470
Alternate gene names: 84489281
Gene position: 551194-552375 (Clockwise)
Preceding gene: 84489280
Following gene: 84489282
Centisome position: 31.19
GC content: 27.24
Gene sequence:
>1182_bases ATGGAAATCACGAAATTAAATTTAGAATCAGAAGATATTGTCCAAAACAATATAGAACAATTAAAGCAATTATTCCCTGA AATTGTTACTGAAGGTAAAATAGATTTTTATAAACTTAAAGAGGTTTTAGGTGATGAAATAGATGATGAAGATGAAAAAT ATGAATTTACATGGAATGGTAAACATGATGCTATTAGAGAGTTTCAAAAACCATCACATTGTACTTTAAGACCAGACAAA AATAATAGTAAAAATTGGAATACCACTGAAAATTTATATATAGAAGGTGATAATTTAGAAGTTTTAAAATTACTTCAAAA ATCTTATCAAAGTAAAATTAAAATGATGTACATTGATCCTCCTTATAATACAGGTAATGACTCTTTTATATACAAAGATA ATTTTCAAGAAAATGAAACTGAATATATAGAGAAAGAAGAAGAAAGAGGAAAATTTCAATCTAATCCCAATAGTTCTGGA CGATACCATACAAACTGGATGAATATGATTTATCCATTACTTCGATTAGCAAGAAACTTATTATCAGAAGAGGGCGTATT ATTAATAAGTATTGATGATAATGAATTTTCTAATTTAATTGTCATGTGTAAAGAAATATTTGGTGAAGAAAATATAGATA ACTTAATCTGGCAAAAAGTTGATAACGATTCTGGAAAAATGAAAATAACATATAGGGTACGATTAGAACATGAATACGTG TTAATTTGTTATAAAAATAAAAATAAAACATACTTTAATAAATTTATCGAAGAAAGAAATTATAAAAATGAGTATGATAA TCCTGATAACGATCCTAGAGGACCATACAAACAAGCAATTATTTCATCAACAGAAGAAAAATCCAATAAAGATAGTCCTA ATTATTATTCAATCACCACACCTTCCGGAAAAATATTTACCAGACAATGGAGAGTAAGTGAAGAAGAAATGTTAGAATTA ATAGGAGAAGATAGGATTTATTTTGGGAAAAATGGAGATTCTGTACCTTCACTTAAAGCTTTTATTAATGAACCAAAATT ATCAACACCTACCACTATATTAAGTGGTGTTGGAACTGCAAAAACTGCTGGAAAAGATATTGAAAATATGTTAGGTTCAA GAAAAATATTTTCTTATCCTAAACCGTGGCTTTCCAGTTGCTGGGTCTTGAAAAAGTTTTGA
Upstream 100 bases:
>100_bases AAAAGATATTAATTTCAATGAAGTAGTGGAATTAAATATACAAATTAATGAATATGAAAAAGAAAAAGTAGAATTAATCA ATAGATTATAGGTGACTATT
Downstream 100 bases:
>100_bases TCAAAAAAAATTTGAAAATTTATTTGAAGATGTAAAAATTTATTTCTTATCTTAATTTTTATTAAAATAAGAAAATAACG TTACACTTGAAATACACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: M.StyLTI; StyLTI methyltransferase [H]
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MEITKLNLESEDIVQNNIEQLKQLFPEIVTEGKIDFYKLKEVLGDEIDDEDEKYEFTWNGKHDAIREFQKPSHCTLRPDK NNSKNWNTTENLYIEGDNLEVLKLLQKSYQSKIKMMYIDPPYNTGNDSFIYKDNFQENETEYIEKEEERGKFQSNPNSSG RYHTNWMNMIYPLLRLARNLLSEEGVLLISIDDNEFSNLIVMCKEIFGEENIDNLIWQKVDNDSGKMKITYRVRLEHEYV LICYKNKNKTYFNKFIEERNYKNEYDNPDNDPRGPYKQAIISSTEEKSNKDSPNYYSITTPSGKIFTRQWRVSEEEMLEL IGEDRIYFGKNGDSVPSLKAFINEPKLSTPTTILSGVGTAKTAGKDIENMLGSRKIFSYPKPWLSSCWVLKKF
Sequences:
>Translated_393_residues MEITKLNLESEDIVQNNIEQLKQLFPEIVTEGKIDFYKLKEVLGDEIDDEDEKYEFTWNGKHDAIREFQKPSHCTLRPDK NNSKNWNTTENLYIEGDNLEVLKLLQKSYQSKIKMMYIDPPYNTGNDSFIYKDNFQENETEYIEKEEERGKFQSNPNSSG RYHTNWMNMIYPLLRLARNLLSEEGVLLISIDDNEFSNLIVMCKEIFGEENIDNLIWQKVDNDSGKMKITYRVRLEHEYV LICYKNKNKTYFNKFIEERNYKNEYDNPDNDPRGPYKQAIISSTEEKSNKDSPNYYSITTPSGKIFTRQWRVSEEEMLEL IGEDRIYFGKNGDSVPSLKAFINEPKLSTPTTILSGVGTAKTAGKDIENMLGSRKIFSYPKPWLSSCWVLKKF >Mature_393_residues MEITKLNLESEDIVQNNIEQLKQLFPEIVTEGKIDFYKLKEVLGDEIDDEDEKYEFTWNGKHDAIREFQKPSHCTLRPDK NNSKNWNTTENLYIEGDNLEVLKLLQKSYQSKIKMMYIDPPYNTGNDSFIYKDNFQENETEYIEKEEERGKFQSNPNSSG RYHTNWMNMIYPLLRLARNLLSEEGVLLISIDDNEFSNLIVMCKEIFGEENIDNLIWQKVDNDSGKMKITYRVRLEHEYV LICYKNKNKTYFNKFIEERNYKNEYDNPDNDPRGPYKQAIISSTEEKSNKDSPNYYSITTPSGKIFTRQWRVSEEEMLEL IGEDRIYFGKNGDSVPSLKAFINEPKLSTPTTILSGVGTAKTAGKDIENMLGSRKIFSYPKPWLSSCWVLKKF
Specific function: Binds the system-specific DNA recognition site 5'-CAGAG- 3'. Necessary for restriction and for methylation of A-4 [H]
COG id: COG2189
COG function: function code L; Adenine specific DNA methylase Mod
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002295 - InterPro: IPR002941 - InterPro: IPR002052 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 46172; Mature: 46172
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITKLNLESEDIVQNNIEQLKQLFPEIVTEGKIDFYKLKEVLGDEIDDEDEKYEFTWNG CCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECC KHDAIREFQKPSHCTLRPDKNNSKNWNTTENLYIEGDNLEVLKLLQKSYQSKIKMMYIDP CHHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEECC PYNTGNDSFIYKDNFQENETEYIEKEEERGKFQSNPNSSGRYHTNWMNMIYPLLRLARNL CCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH LSEEGVLLISIDDNEFSNLIVMCKEIFGEENIDNLIWQKVDNDSGKMKITYRVRLEHEYV HCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEEEECCEEE LICYKNKNKTYFNKFIEERNYKNEYDNPDNDPRGPYKQAIISSTEEKSNKDSPNYYSITT EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCEEEEEC PSGKIFTRQWRVSEEEMLELIGEDRIYFGKNGDSVPSLKAFINEPKLSTPTTILSGVGTA CCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCC KTAGKDIENMLGSRKIFSYPKPWLSSCWVLKKF HHHHHHHHHHHCCCHHCCCCCHHHHHCCHHCCC >Mature Secondary Structure MEITKLNLESEDIVQNNIEQLKQLFPEIVTEGKIDFYKLKEVLGDEIDDEDEKYEFTWNG CCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEECC KHDAIREFQKPSHCTLRPDKNNSKNWNTTENLYIEGDNLEVLKLLQKSYQSKIKMMYIDP CHHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCEEEEEECC PYNTGNDSFIYKDNFQENETEYIEKEEERGKFQSNPNSSGRYHTNWMNMIYPLLRLARNL CCCCCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHH LSEEGVLLISIDDNEFSNLIVMCKEIFGEENIDNLIWQKVDNDSGKMKITYRVRLEHEYV HCCCCEEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEEEECCEEE LICYKNKNKTYFNKFIEERNYKNEYDNPDNDPRGPYKQAIISSTEEKSNKDSPNYYSITT EEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCHHHHCCCCCCCEEEEEC PSGKIFTRQWRVSEEEMLELIGEDRIYFGKNGDSVPSLKAFINEPKLSTPTTILSGVGTA CCCCEEEEEECCCHHHHHHHHCCCCEEECCCCCCCCHHHHHHCCCCCCCCHHHHHCCCCC KTAGKDIENMLGSRKIFSYPKPWLSSCWVLKKF HHHHHHHHHHHCCCHHCCCCCHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8387444; 11677609 [H]