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The map label for this gene is mrtD

Identifier: 84489140

GI number: 84489140

Start: 378399

End: 378920

Strand: Direct

Name: mrtD

Synonym: Msp_0319

Alternate gene names: 84489140

Gene position: 378399-378920 (Clockwise)

Preceding gene: 84489139

Following gene: 84489141

Centisome position: 21.41

GC content: 30.08

Gene sequence:

>522_bases
ATGTTTAAAATGTCAACAGATAATAATGAAGCAGAAGTTAATGTTATAAAAGCAACCGATGTAAAAATTTTTCCAGATAG
AATTTTAAAACCTGAAACAACAGAAACTATCTTAAACAAGGTAATGAAGTTGGAAGGTGTTTTAAGAATTTTAATAAATG
GTGAAAGATTACCTACAGTAGTGACTATGGGTCCAGCAAGGGGAGCACCAGTAAATCACACTGATAGGAAAACAATTAAT
GTTAAGGGTAACGATGTTCCATTGAGAGTATCTGTTGGAGAAATAATTTTAACAGTCCAATTAGACAATCTTGAAGATTT
TGTAACAGAAGTCAATAATATTTTAGATGAAACCTTAAAATTCGGATATAATGTTTCAGTTGGTGTGTTTACAAAAACAA
ATACAACTGTAAGTGATTATATGAAATATGGTCAAGGTTTTGAAGATAAAATAGATTCAAGACTTATCGGATTAGTTGAT
CCAAATGCAAAATCATCAGAAACCATAAGATATATCAGGTGA

Upstream 100 bases:

>100_bases
AGTTGGAGAAGTATATGGTAGCGTAGACAATTTAAGAGAACCAGTAAAATATGTTGCTGAAGGAGCTAGTCAAGTAAAAG
ATAAACTCTAATTATAAGGA

Downstream 100 bases:

>100_bases
TTGTAAATGGCATATGAAGTACAATATTATCCTGGAGAAAGTGTTATTGCAGAAAACCGTAAAAAACACATGAATCCAGA
TCATGAACTTAAAAAACTTA

Product: MrtD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MFKMSTDNNEAEVNVIKATDVKIFPDRILKPETTETILNKVMKLEGVLRILINGERLPTVVTMGPARGAPVNHTDRKTIN
VKGNDVPLRVSVGEIILTVQLDNLEDFVTEVNNILDETLKFGYNVSVGVFTKTNTTVSDYMKYGQGFEDKIDSRLIGLVD
PNAKSSETIRYIR

Sequences:

>Translated_173_residues
MFKMSTDNNEAEVNVIKATDVKIFPDRILKPETTETILNKVMKLEGVLRILINGERLPTVVTMGPARGAPVNHTDRKTIN
VKGNDVPLRVSVGEIILTVQLDNLEDFVTEVNNILDETLKFGYNVSVGVFTKTNTTVSDYMKYGQGFEDKIDSRLIGLVD
PNAKSSETIRYIR
>Mature_173_residues
MFKMSTDNNEAEVNVIKATDVKIFPDRILKPETTETILNKVMKLEGVLRILINGERLPTVVTMGPARGAPVNHTDRKTIN
VKGNDVPLRVSVGEIILTVQLDNLEDFVTEVNNILDETLKFGYNVSVGVFTKTNTTVSDYMKYGQGFEDKIDSRLIGLVD
PNAKSSETIRYIR

Specific function: Unknown

COG id: COG4055

COG function: function code H; Methyl coenzyme M reductase, subunit D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003901
- ProDom:   PD005228 [H]

Pfam domain/function: PF02505 MCR_D [H]

EC number: NA

Molecular weight: Translated: 19346; Mature: 19346

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKMSTDNNEAEVNVIKATDVKIFPDRILKPETTETILNKVMKLEGVLRILINGERLPTV
CCCCCCCCCCEEEEEEEECCEEECHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEE
VTMGPARGAPVNHTDRKTINVKGNDVPLRVSVGEIILTVQLDNLEDFVTEVNNILDETLK
EEECCCCCCCCCCCCCEEEEECCCCEEEEEEECEEEEEEEECCHHHHHHHHHHHHHHHHH
FGYNVSVGVFTKTNTTVSDYMKYGQGFEDKIDSRLIGLVDPNAKSSETIRYIR
CCCCEEEEEEEECCCCHHHHHHHCCCHHHHHCCEEEEEECCCCCCCCEEEECC
>Mature Secondary Structure
MFKMSTDNNEAEVNVIKATDVKIFPDRILKPETTETILNKVMKLEGVLRILINGERLPTV
CCCCCCCCCCEEEEEEEECCEEECHHHCCCCCHHHHHHHHHHHHHHHHEEEECCCCCCEE
VTMGPARGAPVNHTDRKTINVKGNDVPLRVSVGEIILTVQLDNLEDFVTEVNNILDETLK
EEECCCCCCCCCCCCCEEEEECCCCEEEEEEECEEEEEEEECCHHHHHHHHHHHHHHHHH
FGYNVSVGVFTKTNTTVSDYMKYGQGFEDKIDSRLIGLVDPNAKSSETIRYIR
CCCCEEEEEEEECCCCHHHHHHHCCCHHHHHCCEEEEEECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7929010; 9371463 [H]