The gene/protein map for NC_007681 is currently unavailable.
Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489129

Identifier: 84489129

GI number: 84489129

Start: 365884

End: 367248

Strand: Direct

Name: 84489129

Synonym: Msp_0308

Alternate gene names: NA

Gene position: 365884-367248 (Clockwise)

Preceding gene: 84489128

Following gene: 84489131

Centisome position: 20.7

GC content: 28.57

Gene sequence:

>1365_bases
ATGTCAATAGAAAAAGTTACAATACCTAGTATTTCTTCAAGTAAGATGGGTAAAGAGTTTTACACAGTCTTATCTGTTGA
ACTTGGAAATACTACTATAAAATCTATTATTATTACAACTAATATTAAAACAAATAAGAGTTATGAATTAAATAAATGTG
TGGATTTAACTAGAAATGTTGATAATCCTGGAGACTCTGAAGAAGTATTTGGTCATACTATTTGGAACAAACCTTTATCA
GGTCAAGTTATAGAAAAAGCTGTTTCTAGAATAATAAAAAAATCACTTAGTGAAGTAGGCTTGGATGTTAGTGACTTGGA
TTTTGTTGTAAGATCAACTGGTGTTGTTGCTCTTTCTTCTTTATCATATCACATGGATGTTATTATAAAGTCATTATCTA
ATGGTTGTCTTAATGCTGGAATTAAACCATCACAAATGATGGCTCCCTTTTCTATTAATAACATTCCAGAACATATTCGT
AAATCTTCTTTTTTTAATAATATTAAATTTGATGGATCTATTGTGGGAGTAGCTTCTCCAAAGAAAACTGGTGTTGTATC
TAATGAAATGGAAAGTCAACTTGTTACTGCAGGTATTAAGCTAGCAAGTAAAAGTTCAACTGTTGATTATAGAAATCCTG
TTATATCTATTGATATGGGAACAACACTTGCAGGAGAAGTAGTTGATGATTCAAAACCATATGGTAAGTTAGTATGTAAT
TATATTGGATTGGCTGGTGGAATATCTGATATTATATTAAGGGGGTGTGATGTTATTGAAGATAATATGTCTACAATTGA
TATTGCAAATAATCAAAATAACATTCAATTTAATGAAGATATTCTTCATAAACATACAATTAAATTACATGAATTTATTG
ATATTATGAAAGTTCCCAAAAATCTTGATGAATTTGGACAAGTTATAGATTTAACATTACAAAAACAAGAAAATATCAAT
ATCATTGGTTCAAGAATAAATAATTCTAAAAAACTAATAACAACATTCAACAACATAACACAAGACTATACAAATTCTGA
AATTTTACTTCAAATTGATGATATGTATGCATATTTTATTAAAAGACTCATAGACCAAACAAGTAAATTAAATATAATTC
AACCAAAAACAACTTTGGGAATAACAGGAAGGGCTGGAATAACTGGATACAAACCATATTTCATAGAAAAGTATCTGAAT
AATAGCTTTGATAATATATTATTTACACCAGATGGACTAGCACTTGGGGCACTAATGATGGCAAGATGTATGAATTCCCT
TGGAACACCTATAAATCCTGTTGGTGGAAGTAGAGGTGGTATGTGCATAATGCAACAAAGAATAAAACTTTCTAAAAAAA
GATAA

Upstream 100 bases:

>100_bases
ACTGCATGTGCAATGACTGATATGTTTATTGCAGAGGCTAATGAAGCTATTGGAATAAATGCTGTAGATTCTCATCCATA
TAAAAATTTATTATGATACT

Downstream 100 bases:

>100_bases
AAAAAGAAAAAATGATTTTAGTAGGAATGGTTATTAGCCATTTCTTCTAATCTTTGAATCCTATCTGCTGTAGATGGATG
TGTTGAAAATAAGTTTTGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 454; Mature: 453

Protein sequence:

>454_residues
MSIEKVTIPSISSSKMGKEFYTVLSVELGNTTIKSIIITTNIKTNKSYELNKCVDLTRNVDNPGDSEEVFGHTIWNKPLS
GQVIEKAVSRIIKKSLSEVGLDVSDLDFVVRSTGVVALSSLSYHMDVIIKSLSNGCLNAGIKPSQMMAPFSINNIPEHIR
KSSFFNNIKFDGSIVGVASPKKTGVVSNEMESQLVTAGIKLASKSSTVDYRNPVISIDMGTTLAGEVVDDSKPYGKLVCN
YIGLAGGISDIILRGCDVIEDNMSTIDIANNQNNIQFNEDILHKHTIKLHEFIDIMKVPKNLDEFGQVIDLTLQKQENIN
IIGSRINNSKKLITTFNNITQDYTNSEILLQIDDMYAYFIKRLIDQTSKLNIIQPKTTLGITGRAGITGYKPYFIEKYLN
NSFDNILFTPDGLALGALMMARCMNSLGTPINPVGGSRGGMCIMQQRIKLSKKR

Sequences:

>Translated_454_residues
MSIEKVTIPSISSSKMGKEFYTVLSVELGNTTIKSIIITTNIKTNKSYELNKCVDLTRNVDNPGDSEEVFGHTIWNKPLS
GQVIEKAVSRIIKKSLSEVGLDVSDLDFVVRSTGVVALSSLSYHMDVIIKSLSNGCLNAGIKPSQMMAPFSINNIPEHIR
KSSFFNNIKFDGSIVGVASPKKTGVVSNEMESQLVTAGIKLASKSSTVDYRNPVISIDMGTTLAGEVVDDSKPYGKLVCN
YIGLAGGISDIILRGCDVIEDNMSTIDIANNQNNIQFNEDILHKHTIKLHEFIDIMKVPKNLDEFGQVIDLTLQKQENIN
IIGSRINNSKKLITTFNNITQDYTNSEILLQIDDMYAYFIKRLIDQTSKLNIIQPKTTLGITGRAGITGYKPYFIEKYLN
NSFDNILFTPDGLALGALMMARCMNSLGTPINPVGGSRGGMCIMQQRIKLSKKR
>Mature_453_residues
SIEKVTIPSISSSKMGKEFYTVLSVELGNTTIKSIIITTNIKTNKSYELNKCVDLTRNVDNPGDSEEVFGHTIWNKPLSG
QVIEKAVSRIIKKSLSEVGLDVSDLDFVVRSTGVVALSSLSYHMDVIIKSLSNGCLNAGIKPSQMMAPFSINNIPEHIRK
SSFFNNIKFDGSIVGVASPKKTGVVSNEMESQLVTAGIKLASKSSTVDYRNPVISIDMGTTLAGEVVDDSKPYGKLVCNY
IGLAGGISDIILRGCDVIEDNMSTIDIANNQNNIQFNEDILHKHTIKLHEFIDIMKVPKNLDEFGQVIDLTLQKQENINI
IGSRINNSKKLITTFNNITQDYTNSEILLQIDDMYAYFIKRLIDQTSKLNIIQPKTTLGITGRAGITGYKPYFIEKYLNN
SFDNILFTPDGLALGALMMARCMNSLGTPINPVGGSRGGMCIMQQRIKLSKKR

Specific function: Unknown

COG id: COG4065

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH1153 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008303 [H]

Pfam domain/function: PF09887 DUF2114 [H]

EC number: NA

Molecular weight: Translated: 50026; Mature: 49895

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEKVTIPSISSSKMGKEFYTVLSVELGNTTIKSIIITTNIKTNKSYELNKCVDLTRNV
CCCCEEECCCCCCHHHCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCC
DNPGDSEEVFGHTIWNKPLSGQVIEKAVSRIIKKSLSEVGLDVSDLDFVVRSTGVVALSS
CCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHH
LSYHMDVIIKSLSNGCLNAGIKPSQMMAPFSINNIPEHIRKSSFFNNIKFDGSIVGVASP
HHHHHHHHHHHHCCHHHCCCCCHHHEECCCCCCCCHHHHHHHHHHCCCEECCEEEEECCC
KKTGVVSNEMESQLVTAGIKLASKSSTVDYRNPVISIDMGTTLAGEVVDDSKPYGKLVCN
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCHHHHHHH
YIGLAGGISDIILRGCDVIEDNMSTIDIANNQNNIQFNEDILHKHTIKLHEFIDIMKVPK
HHHHHCCHHHHHHHCCHHHCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCC
NLDEFGQVIDLTLQKQENINIIGSRINNSKKLITTFNNITQDYTNSEILLQIDDMYAYFI
CHHHHHHHHHHEEECCCCCEEEEECCCCCCEEEEEHHHHHHHCCCCEEEEEEHHHHHHHH
KRLIDQTSKLNIIQPKTTLGITGRAGITGYKPYFIEKYLNNSFDNILFTPDGLALGALMM
HHHHCCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHH
ARCMNSLGTPINPVGGSRGGMCIMQQRIKLSKKR
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SIEKVTIPSISSSKMGKEFYTVLSVELGNTTIKSIIITTNIKTNKSYELNKCVDLTRNV
CCCEEECCCCCCHHHCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCHHHHHHHHCCC
DNPGDSEEVFGHTIWNKPLSGQVIEKAVSRIIKKSLSEVGLDVSDLDFVVRSTGVVALSS
CCCCCCHHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEHH
LSYHMDVIIKSLSNGCLNAGIKPSQMMAPFSINNIPEHIRKSSFFNNIKFDGSIVGVASP
HHHHHHHHHHHHCCHHHCCCCCHHHEECCCCCCCCHHHHHHHHHHCCCEECCEEEEECCC
KKTGVVSNEMESQLVTAGIKLASKSSTVDYRNPVISIDMGTTLAGEVVDDSKPYGKLVCN
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCEECCCCCCCCCHHHHHHH
YIGLAGGISDIILRGCDVIEDNMSTIDIANNQNNIQFNEDILHKHTIKLHEFIDIMKVPK
HHHHHCCHHHHHHHCCHHHCCCCCEEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHCCC
NLDEFGQVIDLTLQKQENINIIGSRINNSKKLITTFNNITQDYTNSEILLQIDDMYAYFI
CHHHHHHHHHHEEECCCCCEEEEECCCCCCEEEEEHHHHHHHCCCCEEEEEEHHHHHHHH
KRLIDQTSKLNIIQPKTTLGITGRAGITGYKPYFIEKYLNNSFDNILFTPDGLALGALMM
HHHHCCCCCCEEECCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEEECCCHHHHHHHHH
ARCMNSLGTPINPVGGSRGGMCIMQQRIKLSKKR
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]