Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489066
Identifier: 84489066
GI number: 84489066
Start: 297192
End: 297980
Strand: Direct
Name: 84489066
Synonym: Msp_0239
Alternate gene names: NA
Gene position: 297192-297980 (Clockwise)
Preceding gene: 84489065
Following gene: 84489068
Centisome position: 16.82
GC content: 28.64
Gene sequence:
>789_bases ATGTGGTGGTATTATTATTGGTTTGTATTTATGACTATAATTTTAATAATATTTCAAATTTCGGATTGGAATGGTAAATT ATATTCTATTTTAGGGGTGCAGAAAAATGTATATTATAATGGAGAATATAGTTCTTTAAGGACTGGAAAATCACAAGGAG TTCTTCTTATTATTTTTGGTTTTATAGTCTTGGGTTATACTGTACCTCTTCTTAGAGATACAATGGAATTTGCAAAAATG TTCACTATGAGTGTATGGCCAATGACATTTATAATATTTTATGTGGGATGTATTGAATTATTACGTCCTCATACCTTTGG AGAAGAATCACGATGTGATGTTCCATGTGATGATTATGCAAAAGATGCTCTACTAGAGAAAAGCATGCCTTTATCTTATA CAGAACTACTTTTAAAAGCAGAAGCATCACTTCTTATGGGAAGTCCAGTGCATTTTGGTCTGACAATAATAAATCCATTT AACTTTCCAACAATAGTATTAATTATACTCTGGGCAATATATATAGCAGTATTATTAGCATTTACATTTATGGATAAAAT TAATGAATATTTATCAAAACATGAAGAAAAAATACTTAATTTTTTATGTCCTAATGGAGAATATGATAAATTTGATATTA GATATCCACCAGGATATTATTCGTATCTGCTATGTGCATATATACTTCCACTAGTACCAATGTTAATAACACTAGGCACA ATGTTAATATGGACTGATTATTTTTATACAGGAGTTGTGTATAGGTTAATTCTTCCTTTGATATTATAA
Upstream 100 bases:
>100_bases CATATTTAGACTTGACATATGTAGCTAATACAAAAACAAATCAGACAAGGATAAGTGAATATTATGCAACAGTATAAAAA AAATATAATGAGGTGAAAAA
Downstream 100 bases:
>100_bases AGAAGGAAAAAACATTCTCCTTTTTTTATTTTTTTGTTTTAATTCTTTTATTTTTAAGTTTATTTTTTGATTGATTTTAT TAAATGAGATAAATAGGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MWWYYYWFVFMTIILIIFQISDWNGKLYSILGVQKNVYYNGEYSSLRTGKSQGVLLIIFGFIVLGYTVPLLRDTMEFAKM FTMSVWPMTFIIFYVGCIELLRPHTFGEESRCDVPCDDYAKDALLEKSMPLSYTELLLKAEASLLMGSPVHFGLTIINPF NFPTIVLIILWAIYIAVLLAFTFMDKINEYLSKHEEKILNFLCPNGEYDKFDIRYPPGYYSYLLCAYILPLVPMLITLGT MLIWTDYFYTGVVYRLILPLIL
Sequences:
>Translated_262_residues MWWYYYWFVFMTIILIIFQISDWNGKLYSILGVQKNVYYNGEYSSLRTGKSQGVLLIIFGFIVLGYTVPLLRDTMEFAKM FTMSVWPMTFIIFYVGCIELLRPHTFGEESRCDVPCDDYAKDALLEKSMPLSYTELLLKAEASLLMGSPVHFGLTIINPF NFPTIVLIILWAIYIAVLLAFTFMDKINEYLSKHEEKILNFLCPNGEYDKFDIRYPPGYYSYLLCAYILPLVPMLITLGT MLIWTDYFYTGVVYRLILPLIL >Mature_262_residues MWWYYYWFVFMTIILIIFQISDWNGKLYSILGVQKNVYYNGEYSSLRTGKSQGVLLIIFGFIVLGYTVPLLRDTMEFAKM FTMSVWPMTFIIFYVGCIELLRPHTFGEESRCDVPCDDYAKDALLEKSMPLSYTELLLKAEASLLMGSPVHFGLTIINPF NFPTIVLIILWAIYIAVLLAFTFMDKINEYLSKHEEKILNFLCPNGEYDKFDIRYPPGYYSYLLCAYILPLVPMLITLGT MLIWTDYFYTGVVYRLILPLIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30622; Mature: 30622
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWWYYYWFVFMTIILIIFQISDWNGKLYSILGVQKNVYYNGEYSSLRTGKSQGVLLIIFG CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCHHHHHCCCCCCHHHHHHH FIVLGYTVPLLRDTMEFAKMFTMSVWPMTFIIFYVGCIELLRPHTFGEESRCDVPCDDYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH KDALLEKSMPLSYTELLLKAEASLLMGSPVHFGLTIINPFNFPTIVLIILWAIYIAVLLA HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH FTFMDKINEYLSKHEEKILNFLCPNGEYDKFDIRYPPGYYSYLLCAYILPLVPMLITLGT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH MLIWTDYFYTGVVYRLILPLIL HHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MWWYYYWFVFMTIILIIFQISDWNGKLYSILGVQKNVYYNGEYSSLRTGKSQGVLLIIFG CHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEECCCHHHHHCCCCCCHHHHHHH FIVLGYTVPLLRDTMEFAKMFTMSVWPMTFIIFYVGCIELLRPHTFGEESRCDVPCDDYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH KDALLEKSMPLSYTELLLKAEASLLMGSPVHFGLTIINPFNFPTIVLIILWAIYIAVLLA HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHH FTFMDKINEYLSKHEEKILNFLCPNGEYDKFDIRYPPGYYSYLLCAYILPLVPMLITLGT HHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH MLIWTDYFYTGVVYRLILPLIL HHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA