Click here to switch to the map view.

The map label for this gene is 84488982

Identifier: 84488982

GI number: 84488982

Start: 188172

End: 188765

Strand: Direct

Name: 84488982

Synonym: Msp_0153

Alternate gene names: NA

Gene position: 188172-188765 (Clockwise)

Preceding gene: 84488981

Following gene: 84488983

Centisome position: 10.65

GC content: 31.99

Gene sequence:

>594_bases
ATGACTGAATTAGATACATTGAAAGAAAACATGACTAGCGAAGACCATGAAGTTCGTCTAGAAGCATGTAAAGAATTAGT
AGATTATCCTACAGATGCAATTGATATATTAATCAACACATTCACTGATAAAAATCCTCTTGTAAGATTTCAGGCAGCTA
AATCCTTAGCTTCAATAGGTCAAGATTCTATTAAACCATTAATATCTGCACTAAAAAGTGATAATATTTTAGTTCAAAAA
TATGTTATTTTGGCTCTAAAAGATATTGGTGATGATACTGTAGCAAAAGAACTTATAAATGCTCTTGGTTCTGAGGATTT
TGCTATTAGAAAGTTTGCAGCAAAGGCACTTGGGGAAATGGAAGTAAAAAGTGCGGTAGACCCTATTATTGAACTTTTAA
CTGATGATGATTGGGGTGTTAGAACGTCTGCAACAAAGGCTTTAGGTGATATTAAGGATAAAAAAGCTATTGATCCTATT
AAAAAAGCACGAAGGGCAGCAACTGGTGATAAAGACTTTAAAAAGGTTGCAAACAAAGCTCTTAAAAAAATTGATCCTAA
ACCTAAGAAGAAAAAAGCTAAATCTAAAAAATAA

Upstream 100 bases:

>100_bases
TTTTAAGTATTATTATTTATAGATATATAATCAAAGATTAAAACTAAAAGTTACACTGTAGTATTTGGTGTATAATTTTA
GTATGGAGTTGTATTTTTTT

Downstream 100 bases:

>100_bases
TATTACTTTTTTCCTATTTTTCATATTTTTTCTAAAATATCTTATTTTATCCTAACTATAGTGTATGTGTATTTAGTATA
TGGGGATTGTTTTTCTATAG

Product: hypothetical protein

Products: NA

Alternate protein names: Phycocyanin Alpha Phycocyanobilin Lyase CpcE; HEAT Repeat-Containing Protein; Phycocyanin Alpha-Subunit Phycocyanobilin Lyase; Phycocyanin Alpha Phycocyanobilin Lyase; Peptidase; Pbs Lyase Heat Domain Protein Repeat-Containing Protein

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTELDTLKENMTSEDHEVRLEACKELVDYPTDAIDILINTFTDKNPLVRFQAAKSLASIGQDSIKPLISALKSDNILVQK
YVILALKDIGDDTVAKELINALGSEDFAIRKFAAKALGEMEVKSAVDPIIELLTDDDWGVRTSATKALGDIKDKKAIDPI
KKARRAATGDKDFKKVANKALKKIDPKPKKKKAKSKK

Sequences:

>Translated_197_residues
MTELDTLKENMTSEDHEVRLEACKELVDYPTDAIDILINTFTDKNPLVRFQAAKSLASIGQDSIKPLISALKSDNILVQK
YVILALKDIGDDTVAKELINALGSEDFAIRKFAAKALGEMEVKSAVDPIIELLTDDDWGVRTSATKALGDIKDKKAIDPI
KKARRAATGDKDFKKVANKALKKIDPKPKKKKAKSKK
>Mature_196_residues
TELDTLKENMTSEDHEVRLEACKELVDYPTDAIDILINTFTDKNPLVRFQAAKSLASIGQDSIKPLISALKSDNILVQKY
VILALKDIGDDTVAKELINALGSEDFAIRKFAAKALGEMEVKSAVDPIIELLTDDDWGVRTSATKALGDIKDKKAIDPIK
KARRAATGDKDFKKVANKALKKIDPKPKKKKAKSKK

Specific function: Unknown

COG id: COG1413

COG function: function code C; FOG: HEAT repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21722; Mature: 21591

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELDTLKENMTSEDHEVRLEACKELVDYPTDAIDILINTFTDKNPLVRFQAAKSLASIG
CCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
QDSIKPLISALKSDNILVQKYVILALKDIGDDTVAKELINALGSEDFAIRKFAAKALGEM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EVKSAVDPIIELLTDDDWGVRTSATKALGDIKDKKAIDPIKKARRAATGDKDFKKVANKA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LKKIDPKPKKKKAKSKK
HHHCCCCCHHHHCCCCC
>Mature Secondary Structure 
TELDTLKENMTSEDHEVRLEACKELVDYPTDAIDILINTFTDKNPLVRFQAAKSLASIG
CHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHC
QDSIKPLISALKSDNILVQKYVILALKDIGDDTVAKELINALGSEDFAIRKFAAKALGEM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
EVKSAVDPIIELLTDDDWGVRTSATKALGDIKDKKAIDPIKKARRAATGDKDFKKVANKA
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LKKIDPKPKKKKAKSKK
HHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA