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The map label for this gene is rhaS [C]

Identifier: 83721655

GI number: 83721655

Start: 1527175

End: 1528224

Strand: Direct

Name: rhaS [C]

Synonym: BTH_I1350

Alternate gene names: 83721655

Gene position: 1527175-1528224 (Clockwise)

Preceding gene: 83718810

Following gene: 83719291

Centisome position: 40.09

GC content: 66.57

Gene sequence:

>1050_bases
ATGGAATGCGCGTTCAACATTGGTCGGATGGGAGCACACGTGAGTCGTGGTGCAGCTTTCGGAGGCGTGTGCTACCGAAA
AGGGATCGCTGTCGTCTTGTTTGGAGGCTTTTCGTTGATGCAGGCCGGACGCATGGCGGAGATCTTCAATCTTGCCAACC
GCTTTCGGCACACCGGCGAGGATTCCGGCGGCGGCTACGAGATGCTTCTGTTGTCGGCGGCGGGCGGTGCCGTGTATTCG
TCGTCCGGCATTCCCGTCTGGACCCAGCCGCTGCACGAGCACGCGATCGAGAGCGTGCATGCGATCTTTGCGATCGGCGA
GCCGGGCGCGTGCGATCGTGACGACGCGACGGTATCCGAGTGGTTGCGCAGCGCGCGCGCTCACGTCCGAGCATCGGGCG
GCAAGCGGCGCCTGATGGGGCTCGCGGCGCTCGACGGCGGCGATGCGGCGGCGGACGACCTGTCGATCGACGCGATGCTC
TCGGGCGCCGCCTCCACCGAGAAAGCCCGCCCGACGGCGGCGGAGCGGGCGGCGTTCTCGGCCGCGCTCGCGATTATCCG
GCACGATTGCGGCGATAGCGCCGCACACGAGGTTGCCGAACGCTTGTGCCCGGCGCTGAGCGCGCGGCCGGCCGAATCGA
GATTCACCGCGCGCGAGGCGCGCGCGAGCAAGCTGATTCGCGCCTCGGTCCAGCAACTGCGCGACAACAGCGCCAACCGC
ATTTCGATCGCCGATACCGCGCATGCGGCGGCGATGAGCGAGCGCAATTTCCTGCGCCGCTTCAAGCAGGAAATCGGCGT
GACGCCGTCCGAATTCGTCCAGAAGGTGCGGCTCGAGCACGCGTGCCACATGCTCGTGCATACCGATCTTCCGGTCGACA
AGATTGCGCGGCGCACAGGTCTCGGCAGCGGCGACCGTCTCGCGAAGCTGTTTCGCCAGCATTTGTCGATGTCGCCGACC
GAGTATCGCGCGGTCGAGCGCAGCCGAAGCGCGGACGCGGATCTCGCGTGCGGCGAATTGGTTGCGCGGCTGAGCGGATC
GGTTTCATAA

Upstream 100 bases:

>100_bases
ACATGGCGTCGTAATCGGACAGAAAGATTGTTGCAGCGATTTGAAGGAATATGATGCGCCGCAGAATAGACATTGCTGAA
TGAGTGAAAGGGCCGGCGGC

Downstream 100 bases:

>100_bases
CAAGCGGCACGCCGCGTCCGCCGCTTCATTCCCCAGCGTCCGTTTCGCCACGCTCGCGTGCGAAGCCGCGGGCGGCGCTC
GATCGTCGTTTCGGGAAGAC

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator AraC Family; Transcriptional Regulator; AraC Family Transcription Regulator; AraC-Family Transcriptional Regulator; Transcriptional Activator FtrA; AraC Family Regulatory Protein; ThiJ/PfpI Domain-Containing Protein; ADPA Family Transcriptional Regulator; Transcriptional Regulator AraC Family Protein; AraC Family Transcription Regulator Protein; Transcriptional Regulator Arac Family; ADPA-Family Transcriptional Regulator; DJ-1/PfpI Family; AraC Family Transcriptional Regulatory Protein; Transcriptional Regulator DarR; GATase1_AraC_1 Family Transcriptional Regulator; AraC-Family Protein Transcriptional Regulator; Sulfate Permease Andrelated Transporter; Sensor Histidine Kinase/Response Regulator; Fis Family Transcriptional Regulator; Xylose Operon Regulatory Protein

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MECAFNIGRMGAHVSRGAAFGGVCYRKGIAVVLFGGFSLMQAGRMAEIFNLANRFRHTGEDSGGGYEMLLLSAAGGAVYS
SSGIPVWTQPLHEHAIESVHAIFAIGEPGACDRDDATVSEWLRSARAHVRASGGKRRLMGLAALDGGDAAADDLSIDAML
SGAASTEKARPTAAERAAFSAALAIIRHDCGDSAAHEVAERLCPALSARPAESRFTAREARASKLIRASVQQLRDNSANR
ISIADTAHAAAMSERNFLRRFKQEIGVTPSEFVQKVRLEHACHMLVHTDLPVDKIARRTGLGSGDRLAKLFRQHLSMSPT
EYRAVERSRSADADLACGELVARLSGSVS

Sequences:

>Translated_349_residues
MECAFNIGRMGAHVSRGAAFGGVCYRKGIAVVLFGGFSLMQAGRMAEIFNLANRFRHTGEDSGGGYEMLLLSAAGGAVYS
SSGIPVWTQPLHEHAIESVHAIFAIGEPGACDRDDATVSEWLRSARAHVRASGGKRRLMGLAALDGGDAAADDLSIDAML
SGAASTEKARPTAAERAAFSAALAIIRHDCGDSAAHEVAERLCPALSARPAESRFTAREARASKLIRASVQQLRDNSANR
ISIADTAHAAAMSERNFLRRFKQEIGVTPSEFVQKVRLEHACHMLVHTDLPVDKIARRTGLGSGDRLAKLFRQHLSMSPT
EYRAVERSRSADADLACGELVARLSGSVS
>Mature_349_residues
MECAFNIGRMGAHVSRGAAFGGVCYRKGIAVVLFGGFSLMQAGRMAEIFNLANRFRHTGEDSGGGYEMLLLSAAGGAVYS
SSGIPVWTQPLHEHAIESVHAIFAIGEPGACDRDDATVSEWLRSARAHVRASGGKRRLMGLAALDGGDAAADDLSIDAML
SGAASTEKARPTAAERAAFSAALAIIRHDCGDSAAHEVAERLCPALSARPAESRFTAREARASKLIRASVQQLRDNSANR
ISIADTAHAAAMSERNFLRRFKQEIGVTPSEFVQKVRLEHACHMLVHTDLPVDKIARRTGLGSGDRLAKLFRQHLSMSPT
EYRAVERSRSADADLACGELVARLSGSVS

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37228; Mature: 37228

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECAFNIGRMGAHVSRGAAFGGVCYRKGIAVVLFGGFSLMQAGRMAEIFNLANRFRHTGE
CCCCCCHHHHCHHHHCCCHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCC
DSGGGYEMLLLSAAGGAVYSSSGIPVWTQPLHEHAIESVHAIFAIGEPGACDRDDATVSE
CCCCCEEEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHH
WLRSARAHVRASGGKRRLMGLAALDGGDAAADDLSIDAMLSGAASTEKARPTAAERAAFS
HHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH
AALAIIRHDCGDSAAHEVAERLCPALSARPAESRFTAREARASKLIRASVQQLRDNSANR
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ISIADTAHAAAMSERNFLRRFKQEIGVTPSEFVQKVRLEHACHMLVHTDLPVDKIARRTG
EEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
LGSGDRLAKLFRQHLSMSPTEYRAVERSRSADADLACGELVARLSGSVS
CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MECAFNIGRMGAHVSRGAAFGGVCYRKGIAVVLFGGFSLMQAGRMAEIFNLANRFRHTGE
CCCCCCHHHHCHHHHCCCHHHHHHHHCCCEEEEECCHHHHHCCHHHHHHHHHHHHHCCCC
DSGGGYEMLLLSAAGGAVYSSSGIPVWTQPLHEHAIESVHAIFAIGEPGACDRDDATVSE
CCCCCEEEEEEEECCCCEECCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHH
WLRSARAHVRASGGKRRLMGLAALDGGDAAADDLSIDAMLSGAASTEKARPTAAERAAFS
HHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHH
AALAIIRHDCGDSAAHEVAERLCPALSARPAESRFTAREARASKLIRASVQQLRDNSANR
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
ISIADTAHAAAMSERNFLRRFKQEIGVTPSEFVQKVRLEHACHMLVHTDLPVDKIARRTG
EEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHC
LGSGDRLAKLFRQHLSMSPTEYRAVERSRSADADLACGELVARLSGSVS
CCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA