Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is trxA [H]
Identifier: 83721362
GI number: 83721362
Start: 2494218
End: 2494658
Strand: Reverse
Name: trxA [H]
Synonym: BTH_I2218
Alternate gene names: 83721362
Gene position: 2494658-2494218 (Counterclockwise)
Preceding gene: 83718560
Following gene: 83718809
Centisome position: 65.49
GC content: 62.36
Gene sequence:
>441_bases ATGCAGCGCTCACGCCCTTCTTTTCGCAAGAGCGGAGCTTCCTGCCCCGGCGACCGGCAAGGCCCTCCGGCGGCCGGCGC AGGCAGTCCCCGAACCGAAAGAGGTATTGACCCAATGAGCGAACAGATCAAACACATCAGCGACGCATCGTTCGAGCAGG ACGTCGTCAAGTCCGACAAGCCGGTCCTGCTGGACTTCTGGGCCGAATGGTGCGGTCCGTGCAAGATGATTGCCCCGATT CTCGATGAAGTCGCGAAGGACTACGGCGACAAGCTGCAGATCGCGAAGATCAACGTCGACGACAACCAGGCGACGCCCGC GAAGTTCGGCGTGCGCGGCATCCCGACGCTGATCCTCTTCAAGAACGGCGCGGTCGCCGCGCAAAAGGTGGGCGCGCTGT CGAAGTCGCAACTCACCGCGTTCCTGGACAGCCATCTCTAA
Upstream 100 bases:
>100_bases AAGCGCATCACGCCCCTGTTCGCATGACGACTACTATCGCCGTCAACAGCGGATAGCAATTTAGGCTAATATGACGCCCG AATGACCCGCGAGCCGCGGT
Downstream 100 bases:
>100_bases ACGGGTGCGCCGCGGCGCACGTGTTGTCAGCCGGCAACACGTGCGCCGCGAAATCCGCCGATCGGTCGCTCAAGCCCGAA TCGGCCTATGCTAGAATCAA
Product: thioredoxin
Products: NA
Alternate protein names: Trx [H]
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MQRSRPSFRKSGASCPGDRQGPPAAGAGSPRTERGIDPMSEQIKHISDASFEQDVVKSDKPVLLDFWAEWCGPCKMIAPI LDEVAKDYGDKLQIAKINVDDNQATPAKFGVRGIPTLILFKNGAVAAQKVGALSKSQLTAFLDSHL
Sequences:
>Translated_146_residues MQRSRPSFRKSGASCPGDRQGPPAAGAGSPRTERGIDPMSEQIKHISDASFEQDVVKSDKPVLLDFWAEWCGPCKMIAPI LDEVAKDYGDKLQIAKINVDDNQATPAKFGVRGIPTLILFKNGAVAAQKVGALSKSQLTAFLDSHL >Mature_146_residues MQRSRPSFRKSGASCPGDRQGPPAAGAGSPRTERGIDPMSEQIKHISDASFEQDVVKSDKPVLLDFWAEWCGPCKMIAPI LDEVAKDYGDKLQIAKINVDDNQATPAKFGVRGIPTLILFKNGAVAAQKVGALSKSQLTAFLDSHL
Specific function: Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions [H]
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI21361403, Length=93, Percent_Identity=43.010752688172, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI87082331, Length=108, Percent_Identity=64.8148148148148, Blast_Score=155, Evalue=8e-40, Organism=Escherichia coli, GI1788936, Length=92, Percent_Identity=40.2173913043478, Blast_Score=91, Evalue=4e-20, Organism=Escherichia coli, GI87081747, Length=84, Percent_Identity=38.0952380952381, Blast_Score=70, Evalue=7e-14, Organism=Caenorhabditis elegans, GI212646193, Length=115, Percent_Identity=33.9130434782609, Blast_Score=76, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17554386, Length=87, Percent_Identity=39.0804597701149, Blast_Score=70, Evalue=3e-13, Organism=Caenorhabditis elegans, GI71998175, Length=86, Percent_Identity=39.5348837209302, Blast_Score=67, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17509965, Length=76, Percent_Identity=39.4736842105263, Blast_Score=67, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71980565, Length=85, Percent_Identity=40, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17556044, Length=167, Percent_Identity=23.3532934131737, Blast_Score=63, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321648, Length=94, Percent_Identity=39.3617021276596, Blast_Score=72, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323072, Length=90, Percent_Identity=40, Blast_Score=71, Evalue=7e-14, Organism=Drosophila melanogaster, GI24639826, Length=94, Percent_Identity=39.3617021276596, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI28573567, Length=92, Percent_Identity=34.7826086956522, Blast_Score=79, Evalue=9e-16, Organism=Drosophila melanogaster, GI24639068, Length=139, Percent_Identity=29.4964028776978, Blast_Score=78, Evalue=2e-15, Organism=Drosophila melanogaster, GI24664269, Length=74, Percent_Identity=40.5405405405405, Blast_Score=75, Evalue=1e-14, Organism=Drosophila melanogaster, GI17648013, Length=78, Percent_Identity=38.4615384615385, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI24583090, Length=78, Percent_Identity=38.4615384615385, Blast_Score=72, Evalue=2e-13,
Paralogues:
None
Copy number: 3,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR017937 - InterPro: IPR013766 - InterPro: IPR012335 [H]
Pfam domain/function: PF00085 Thioredoxin [H]
EC number: NA
Molecular weight: Translated: 15722; Mature: 15722
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRSRPSFRKSGASCPGDRQGPPAAGAGSPRTERGIDPMSEQIKHISDASFEQDVVKSDK CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCC PVLLDFWAEWCGPCKMIAPILDEVAKDYGDKLQIAKINVDDNQATPAKFGVRGIPTLILF CCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHCCCCCCCEEEEE KNGAVAAQKVGALSKSQLTAFLDSHL CCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQRSRPSFRKSGASCPGDRQGPPAAGAGSPRTERGIDPMSEQIKHISDASFEQDVVKSDK CCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCC PVLLDFWAEWCGPCKMIAPILDEVAKDYGDKLQIAKINVDDNQATPAKFGVRGIPTLILF CCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHCCCCCCCEEEEE KNGAVAAQKVGALSKSQLTAFLDSHL CCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Reduction reactions; participates in dithiol-disulfide exchange reactions [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10224002; 10984043 [H]