Click here to switch to the map view.

The map label for this gene is yoaF [C]

Identifier: 83721241

GI number: 83721241

Start: 1165774

End: 1166232

Strand: Direct

Name: yoaF [C]

Synonym: BTH_I1026

Alternate gene names: 83721241

Gene position: 1165774-1166232 (Clockwise)

Preceding gene: 83719874

Following gene: 83718491

Centisome position: 30.6

GC content: 66.01

Gene sequence:

>459_bases
GTGCCCGAACGCGCGCCGCTCGGGCCGCGAATCGCAAGCATTCGAGCGCGGGACCTGCCCGTTTTCGGTGCGCACCGAGC
ATTCAATCGATCGCGCCCGACGCCGCGTCGAGCGTTTTTCTCTTATGCTGAATGCTCGTCAAACGCCATGAGGAGGTCAG
CCATGTTCGTCCGTCTGCTGTTCGGTTGTGCATTGGGCGCCGCCGCCGCGACGGCGTTCGCGCAGCCGTTGCCGCCGAAT
CAGTCGGCCACGCTCGCGAATCCCGCGTCGGTGAATTGCGAAAAGCTGGGCGGCAAGGTGGTGATCCACGACGGCCCGCG
CGGCCAGTTCGGAATCTGCGCGTTCAAGGACGGACGCGAATGCGACGAATGGGCGCTCTATCGCGACGATCGTTGCGTGC
AGCTCGACGCGCACGGCTGGCCGATCGCGCAGCACGGCACGAAGCCCGCGTCGAAGTGA

Upstream 100 bases:

>100_bases
ACGCTCGCCGCCGTTCCGCGTTCGTCATTCGTCGTTCGGCGCGTGCCGCTCATCGTCGTTCGTCGTCATTCGTCGTCGCG
CAGCGTCCTCGACCGTCGCC

Downstream 100 bases:

>100_bases
CGGCGGCGCGTCGCGCTTTCGCGCCGGCACGTTCGATGCGGAAGCGGGCGAGGAGATGGGCATGGGCCCGCACGCCGGCA
CGGGCGCGGACGAGGCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MPERAPLGPRIASIRARDLPVFGAHRAFNRSRPTPRRAFFSYAECSSNAMRRSAMFVRLLFGCALGAAAATAFAQPLPPN
QSATLANPASVNCEKLGGKVVIHDGPRGQFGICAFKDGRECDEWALYRDDRCVQLDAHGWPIAQHGTKPASK

Sequences:

>Translated_152_residues
MPERAPLGPRIASIRARDLPVFGAHRAFNRSRPTPRRAFFSYAECSSNAMRRSAMFVRLLFGCALGAAAATAFAQPLPPN
QSATLANPASVNCEKLGGKVVIHDGPRGQFGICAFKDGRECDEWALYRDDRCVQLDAHGWPIAQHGTKPASK
>Mature_151_residues
PERAPLGPRIASIRARDLPVFGAHRAFNRSRPTPRRAFFSYAECSSNAMRRSAMFVRLLFGCALGAAAATAFAQPLPPNQ
SATLANPASVNCEKLGGKVVIHDGPRGQFGICAFKDGRECDEWALYRDDRCVQLDAHGWPIAQHGTKPASK

Specific function: Unknown

COG id: COG3042

COG function: function code R; Putative hemolysin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16538; Mature: 16407

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPERAPLGPRIASIRARDLPVFGAHRAFNRSRPTPRRAFFSYAECSSNAMRRSAMFVRLL
CCCCCCCCCCEEEEECCCCCEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FGCALGAAAATAFAQPLPPNQSATLANPASVNCEKLGGKVVIHDGPRGQFGICAFKDGRE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCEEEEEECCCCC
CDEWALYRDDRCVQLDAHGWPIAQHGTKPASK
CCHHHEECCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PERAPLGPRIASIRARDLPVFGAHRAFNRSRPTPRRAFFSYAECSSNAMRRSAMFVRLL
CCCCCCCCCEEEEECCCCCEECCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FGCALGAAAATAFAQPLPPNQSATLANPASVNCEKLGGKVVIHDGPRGQFGICAFKDGRE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCEEEEEECCCCC
CDEWALYRDDRCVQLDAHGWPIAQHGTKPASK
CCHHHEECCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA