Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is udg [H]
Identifier: 83721201
GI number: 83721201
Start: 1850938
End: 1852338
Strand: Direct
Name: udg [H]
Synonym: BTH_I1642
Alternate gene names: 83721201
Gene position: 1850938-1852338 (Clockwise)
Preceding gene: 83718899
Following gene: 83720386
Centisome position: 48.59
GC content: 66.24
Gene sequence:
>1401_bases ATGAAGATCACCATCATCGGCACGGGCTACGTGGGCCTCGTCACCGGCGCGTGTCTCGCCGAGATCGGCCACGACGTGTT CTGTCTCGACGTCGATCCCCGCAAGATCGACATCCTGAACAACGGCGGCATGCCGATTCACGAACCCGGACTGCAGGAAA TCATCGCGCGCACCCGCGCGGCCGGGCGCATCACGTTCTCGACCGACGTCGCGGCGAGCGTCGCGCATGGCGAGATCCAG TTCATCGCGGTCGGCACGCCGCCCGACGAGGACGGTTCGGCGGACCTGCAATACGTGCTCGAGGCGGCGCGCAACATCGG CCGCCACATGACGGGCTACAAGGTGATCGTCGACAAGTCGACGGTGCCCGTCGGCACCGCGCAGCGCGTGCGCGCTGTGG TCGACGAGGTGCTCGCCGCGCGCGGCCTCGAGGGCAGCGCCGAGCATCGCTTCTCGGTCGTGTCGAATCCCGAGTTCCTG AAGGAGGGCGCGGCCGTCGACGATTTCATGCGGCCCGACCGGATCATCATCGGCGTCGACGACGACGCGGCGGGCGCGAT CGCCCGCGAGAAGATGAAGAAGCTCTACGCGCCGTTCAACCGCAATCACGAGCGCACGATCTACATGGATGTGCGTTCGG CCGAGTTCTCGAAATACGCGGCGAACGCGATGCTCGCGACGCGCATTTCGTTCATGAACGAAATGTCGAATCTCGCGGAT CGCGTCGGCGCCGATATCGAGGCGGTGCGGCGCGGGATCGGCTCCGATCCGCGGATCGGCTATCACTTCCTGTATGCAGG CGTCGGCTACGGCGGCTCGTGCTTTCCGAAGGACGTGCAGGCGCTCATTCGCACCGCGAGCGAGAACGGTCAGCCGCTCA AGATTCTCGAGGCGGTCGAGGACGTGAACCACGCGCAGAAGAACGTGCTGCTCGACAAGATCGAACAGCGTTACGGCGCC GATCTGGCGGGCCGCACGTTCGCCGTCTGGGGGCTCGCGTTCAAGCCGAACACCGACGACATGCGCGAAGCGCCGAGCCG GCGCCTGATCGCGTCGCTGCTCGCGCGCGGCGCGACGGTGCGCGCGTACGATCCCGTCGCGCTCGACGAGGCGCGGCGTG TTTTCGCGCTCGATCTGCATGACGGGCCCGACGCGCTCGCGCGGCTCGCCTTCGTCGATTCGGCCGACGACGCGCTCGCG GGCGCGGACGCGCTCGTCATCGTCACGGAGTGGAAGGAATTCAAGAGCCCGGACTTCGCGCATCTGAAATCGGTGCTGAA AGCGCCCGTGATCTTCGACGGCCGCAACCTGTACGAACCCGACGCGATGGCCGAGCTCGGCATCGATTACCACGCTATTG GACGCCCCTATGTCGTGCCCTTCTCTTCCGAGCGCGAATAA
Upstream 100 bases:
>100_bases AACGAGGCAGTAATGGGGCAGGCCACGCGGGCCGGCGCGACACCGCCCGCGGCCTGAACCGGGCGGACGTCGTCCGCTCG AGCGAATCATCGGAATATTT
Downstream 100 bases:
>100_bases GCGCACGGCGCTCGCCGCGACCGCGCGGGCCGTGCCGCGCGAGCAGATCGCGAAGTCGCGCGTGCTCGTCGTCGGCGACG TGATGCTCGATCGCTACTGG
Product: UDP-glucose 6-dehydrogenase
Products: NA
Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH [H]
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLQEIIARTRAAGRITFSTDVAASVAHGEIQ FIAVGTPPDEDGSADLQYVLEAARNIGRHMTGYKVIVDKSTVPVGTAQRVRAVVDEVLAARGLEGSAEHRFSVVSNPEFL KEGAAVDDFMRPDRIIIGVDDDAAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFSKYAANAMLATRISFMNEMSNLAD RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTASENGQPLKILEAVEDVNHAQKNVLLDKIEQRYGA DLAGRTFAVWGLAFKPNTDDMREAPSRRLIASLLARGATVRAYDPVALDEARRVFALDLHDGPDALARLAFVDSADDALA GADALVIVTEWKEFKSPDFAHLKSVLKAPVIFDGRNLYEPDAMAELGIDYHAIGRPYVVPFSSERE
Sequences:
>Translated_466_residues MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLQEIIARTRAAGRITFSTDVAASVAHGEIQ FIAVGTPPDEDGSADLQYVLEAARNIGRHMTGYKVIVDKSTVPVGTAQRVRAVVDEVLAARGLEGSAEHRFSVVSNPEFL KEGAAVDDFMRPDRIIIGVDDDAAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFSKYAANAMLATRISFMNEMSNLAD RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTASENGQPLKILEAVEDVNHAQKNVLLDKIEQRYGA DLAGRTFAVWGLAFKPNTDDMREAPSRRLIASLLARGATVRAYDPVALDEARRVFALDLHDGPDALARLAFVDSADDALA GADALVIVTEWKEFKSPDFAHLKSVLKAPVIFDGRNLYEPDAMAELGIDYHAIGRPYVVPFSSERE >Mature_466_residues MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLQEIIARTRAAGRITFSTDVAASVAHGEIQ FIAVGTPPDEDGSADLQYVLEAARNIGRHMTGYKVIVDKSTVPVGTAQRVRAVVDEVLAARGLEGSAEHRFSVVSNPEFL KEGAAVDDFMRPDRIIIGVDDDAAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFSKYAANAMLATRISFMNEMSNLAD RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTASENGQPLKILEAVEDVNHAQKNVLLDKIEQRYGA DLAGRTFAVWGLAFKPNTDDMREAPSRRLIASLLARGATVRAYDPVALDEARRVFALDLHDGPDALARLAFVDSADDALA GADALVIVTEWKEFKSPDFAHLKSVLKAPVIFDGRNLYEPDAMAELGIDYHAIGRPYVVPFSSERE
Specific function: Unknown
COG id: COG1004
COG function: function code M; Predicted UDP-glucose 6-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=472, Percent_Identity=35.5932203389831, Blast_Score=254, Evalue=1e-67, Organism=Homo sapiens, GI296040438, Length=374, Percent_Identity=36.3636363636364, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI296040443, Length=315, Percent_Identity=37.4603174603175, Blast_Score=176, Evalue=5e-44, Organism=Escherichia coli, GI1788340, Length=380, Percent_Identity=29.4736842105263, Blast_Score=159, Evalue=3e-40, Organism=Escherichia coli, GI48994968, Length=437, Percent_Identity=26.3157894736842, Blast_Score=139, Evalue=3e-34, Organism=Caenorhabditis elegans, GI17560350, Length=469, Percent_Identity=35.181236673774, Blast_Score=253, Evalue=1e-67, Organism=Drosophila melanogaster, GI17136908, Length=472, Percent_Identity=34.7457627118644, Blast_Score=257, Evalue=1e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR021157 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: =1.1.1.22 [H]
Molecular weight: Translated: 50729; Mature: 50729
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLQEIIARTRA CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHC AGRITFSTDVAASVAHGEIQFIAVGTPPDEDGSADLQYVLEAARNIGRHMTGYKVIVDKS CCEEEEECCHHHHEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC TVPVGTAQRVRAVVDEVLAARGLEGSAEHRFSVVSNPEFLKEGAAVDDFMRPDRIIIGVD CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCHHHHCCCCEEEEECC DDAAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFSKYAANAMLATRISFMNEMSNLAD CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTASENGQPLKILEAVE HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH DVNHAQKNVLLDKIEQRYGADLAGRTFAVWGLAFKPNTDDMREAPSRRLIASLLARGATV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCHHHHHHHHHHHCCCEE RAYDPVALDEARRVFALDLHDGPDALARLAFVDSADDALAGADALVIVTEWKEFKSPDFA EECCCHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCHHCCCCEEEEEEECHHHCCCCHH HLKSVLKAPVIFDGRNLYEPDAMAELGIDYHAIGRPYVVPFSSERE HHHHHHCCCEEECCCCCCCCHHHHHHCCCEEECCCCEEECCCCCCC >Mature Secondary Structure MKITIIGTGYVGLVTGACLAEIGHDVFCLDVDPRKIDILNNGGMPIHEPGLQEIIARTRA CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHC AGRITFSTDVAASVAHGEIQFIAVGTPPDEDGSADLQYVLEAARNIGRHMTGYKVIVDKS CCEEEEECCHHHHEECCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECC TVPVGTAQRVRAVVDEVLAARGLEGSAEHRFSVVSNPEFLKEGAAVDDFMRPDRIIIGVD CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHCCCCHHHHCCCCEEEEECC DDAAGAIAREKMKKLYAPFNRNHERTIYMDVRSAEFSKYAANAMLATRISFMNEMSNLAD CCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH RVGADIEAVRRGIGSDPRIGYHFLYAGVGYGGSCFPKDVQALIRTASENGQPLKILEAVE HHCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHH DVNHAQKNVLLDKIEQRYGADLAGRTFAVWGLAFKPNTDDMREAPSRRLIASLLARGATV HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHHHHCHHHHHHHHHHHCCCEE RAYDPVALDEARRVFALDLHDGPDALARLAFVDSADDALAGADALVIVTEWKEFKSPDFA EECCCHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCHHCCCCEEEEEEECHHHCCCCHH HLKSVLKAPVIFDGRNLYEPDAMAELGIDYHAIGRPYVVPFSSERE HHHHHHCCCEEECCCCCCCCHHHHHHCCCEEECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]