| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is secA [H]
Identifier: 83721069
GI number: 83721069
Start: 1272916
End: 1275708
Strand: Direct
Name: secA [H]
Synonym: BTH_I1127
Alternate gene names: 83721069
Gene position: 1272916-1275708 (Clockwise)
Preceding gene: 83720262
Following gene: 83718747
Centisome position: 33.42
GC content: 65.84
Gene sequence:
>2793_bases ATGACAACCGGTTTTCTTCAGAAAATTTTTGGCAGCCGCAACCAGCGGCTCGTCAAGCAATACCAAAAGACCGTCGCGAC GATCAATGCGCTCGAAACGCAGATCGAGAAGCTGACGGACGACCAGTTGCGCGGCAAGACAGGGGAGTTCCGTCAGCGCA TCGCGGCCGGCGAGTCGCTCGACAAGCTCCTGCCCGAGGCGTTCGCCGTGTGCCGCGAGGCGAGCCGCCGCGTGCTGAAG ATGCGCCACTTCGACGTGCAGATGATCGGCGGCATGGTGCTGCATTACGGCAAGATCGCCGAAATGCGCACGGGCGAGGG CAAGACGCTCGTCGCGACGCTCGCCGCGTATCTGAACGCGCTCGCGGGCCGCGGCGTGCACGTCGTGACGGTCAACGACT ACCTCGCGCAGCGCGACGCCGAGTGGATGGGCCGTCTTTACAACTTCCTCGGGCTCTCCGTCGGCATCAACCTGTCGGGG ATGGAGCACGACCAGAAGCAGGCGGCGTACGCGGCCGACATCACGTACGGCACGAACAACGAATTCGGCTTCGACTACCT GCGCGACAACATGGTCTACGAGACCGACGCGCGCGTGCAGCGGCCGCTGAACTTCGCGGTGGTCGACGAAGTCGACTCGA TCCTGATCGACGAGGCGCGCACGCCGCTCATCATCTCGGGCCAGGCGGAGGATCACACCGAGCTGTACGTGCGGATGAAC GCGCTGCCGCCGCTGCTCGAGCGCCAGATCGGCGAGGAGAAGGCGGACGGCACGGGCGTCGAGAAGCCGGGCGATTACAC GCTCGACGAAAAGGGCCGCCAGGTGTTCCTGACCGAGTCGGGCCACGAGAAGGCCGAGCGGATGCTCGCCGAATGGGGCT TGATCGGCGACGGCGAGAGCCTCTACGCGCCGCAGAACATCACGCTGATGCACCATGTGTACGCGGCGCTGCGCGCACAC ACGCTCTTCCATCGCGATCAGCACTACGTCGTGCAGAACGGCGAAGTGATCATCGTCGACGAATTCACGGGCCGCCTGAT GCCGGGCCGCCGCTGGTCCGACGGCCTGCACCAGGCGGTCGAGGCGAAGGAGCACGTGAAGATCCAGAGCGAGAACCAGA CGCTCGCGTCGATCACGTTCCAGAACTACTTCCGGATGTACGCGAAGCTCTCGGGCATGACGGGCACGGCGGACACCGAG GCGTACGAATTCAACGAGATCTACGGCCTCGAGACGGTCGTGATCCCGACCAACCGGCCGCCGAAGCGGATCGACAAGCA GGATCAGATCTACAAGACCGCGAAGGAGCGCTACGACGCGGTGATCCGCGATATCCGCGAGTGCTACGAGCGCGGCCAGC CGGTGCTCGTCGGCACGACGTCGATCGAGAACTCGGAGCTGCTGTCGCACCTGCTCAAGCAGGCGGGCCTGCCGCACGAG GTGCTGAACGCGAAGCAGCACGCGCGCGAGGCGGCGATCGTCGCGGAGGCGGGCCGGCCGAAGCGCGTCACGATCGCGAC GAACATGGCGGGCCGCGGCACCGACATCGTGCTCGGTGGCAACGTCGAGAAGCAGGCGGCGTTCATCGAGGCCGACGAGG CGATTCCGGCCGACGAAAAGGCGCGCCGCATCCAGCAGCTGCACGACGAATGGGAAACGCTGCACGAGCAGGTGAAGACC GCGGGCGGTCTTCACATCATCGGCACCGAGCGCCACGAGTCGCGCCGGATCGACAATCAGCTGCGCGGCCGTGCGGGCCG GCAGGGCGATCCGGGCTCGTCGCGCTTCTACCTGTCGCTCGAGGATCCGCTGTTGCGCATCTTCGCGGGCGACCGCGTGC GCGCGATCATGGATCGCCTGAAGATGCCGGAGGGCGAGGCGATCGAGGCGGGCATCGTCACGCGCTCGATCGAATCCGCG CAGCGCAAGGTCGAGGCGCGCAACTTCGACATCCGAAAGCAGCTGCTCGAATACGACGACGTGTCGAACGATCAGCGCAA GGTGATCTATCAGCAGCGCAACGAATTGCTCGAAGCACACGACATCGCCGAAACGATCGGCGCGATGCGTCACGGCGTGA TCTCGGAAGTCGTCCGCCAGTTCGTGCCGGCGGGCAGCATCGAGGAGCAGTGGGATCTGCCCGAGCTCGAGGAGACGCTG CGCAACGACTGGCAACTCGACCTCGCGATCCAGGAAATGGTGAACGAGTCGTCGTCGATTAACGCGGACGAGATTCTCGA CGCCGTCACGACGGCCGCCGACGAGCACTACGAAGCGAAGGTCGCGCTGGTCGGCCGCGAATCGTTCAGCGCGTTCGAGC GCTCGATCATGCTGCAGACGCTCGACCGGCTGTGGCGCGAGCACCTCGCGGCGCTCGACCATCTGCGTCAGGGCATCCAT CTGCGCGGCTATGCACAGAAGAACCCGAAGCAGGAATACAAGCGCGAGGCGTTCGAACTGTTCGCGGCGATGCTCGACGC GGTGAAGCAGGAAGTCACGCGGATCGTGATGAACGTGCAGATCCAGTCGCCCGAGCAGCTCGAGGAGGCGGCCGAGCAGA TCGAGGAGCAGGGCGGCCAGCTCGGCAACGTCGAGTTCCAGCACGCCGATTTCGCGGCGGCCGCCGCCGCGTCGGCGGGG GGCGCGGTGGTCGCGGACGCGACGGCCGAGATGGTCGGCCACGCGATGAGCCACAGCGGCCCGGCGGGCGAAGTGCCGCG GGTCGGACGCAACGATCCGTGCCCATGCGGCAGCGGCAAGAAGTACAAGCACTGTCACGGCAAGCTGAGCTGA
Upstream 100 bases:
>100_bases CGACGTTTGAATTCACTTCTACGCTAAGCCGCCGAGGCTCGGCGCGCCGGGGAGGGCGTTCACCGCTCCGGGGCCGTTGC ACCGACGCACACCCGATCCG
Downstream 100 bases:
>100_bases CGTGATCGAAGGCGGCGCGCGATAAGCGCGCCGCGTCGTCTGTGCGCGAGATTTTTCGAGGTGTGATGCGCGGCGGGGCG TGAGCGGCCGCCGGTTCTTC
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 930; Mature: 929
Protein sequence:
>930_residues MTTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTGEFRQRIAAGESLDKLLPEAFAVCREASRRVLK MRHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNALAGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSG MEHDQKQAAYAADITYGTNNEFGFDYLRDNMVYETDARVQRPLNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMN ALPPLLERQIGEEKADGTGVEKPGDYTLDEKGRQVFLTESGHEKAERMLAEWGLIGDGESLYAPQNITLMHHVYAALRAH TLFHRDQHYVVQNGEVIIVDEFTGRLMPGRRWSDGLHQAVEAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTE AYEFNEIYGLETVVIPTNRPPKRIDKQDQIYKTAKERYDAVIRDIRECYERGQPVLVGTTSIENSELLSHLLKQAGLPHE VLNAKQHAREAAIVAEAGRPKRVTIATNMAGRGTDIVLGGNVEKQAAFIEADEAIPADEKARRIQQLHDEWETLHEQVKT AGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESA QRKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVISEVVRQFVPAGSIEEQWDLPELEETL RNDWQLDLAIQEMVNESSSINADEILDAVTTAADEHYEAKVALVGRESFSAFERSIMLQTLDRLWREHLAALDHLRQGIH LRGYAQKNPKQEYKREAFELFAAMLDAVKQEVTRIVMNVQIQSPEQLEEAAEQIEEQGGQLGNVEFQHADFAAAAAASAG GAVVADATAEMVGHAMSHSGPAGEVPRVGRNDPCPCGSGKKYKHCHGKLS
Sequences:
>Translated_930_residues MTTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTGEFRQRIAAGESLDKLLPEAFAVCREASRRVLK MRHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNALAGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSG MEHDQKQAAYAADITYGTNNEFGFDYLRDNMVYETDARVQRPLNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMN ALPPLLERQIGEEKADGTGVEKPGDYTLDEKGRQVFLTESGHEKAERMLAEWGLIGDGESLYAPQNITLMHHVYAALRAH TLFHRDQHYVVQNGEVIIVDEFTGRLMPGRRWSDGLHQAVEAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTE AYEFNEIYGLETVVIPTNRPPKRIDKQDQIYKTAKERYDAVIRDIRECYERGQPVLVGTTSIENSELLSHLLKQAGLPHE VLNAKQHAREAAIVAEAGRPKRVTIATNMAGRGTDIVLGGNVEKQAAFIEADEAIPADEKARRIQQLHDEWETLHEQVKT AGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESA QRKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVISEVVRQFVPAGSIEEQWDLPELEETL RNDWQLDLAIQEMVNESSSINADEILDAVTTAADEHYEAKVALVGRESFSAFERSIMLQTLDRLWREHLAALDHLRQGIH LRGYAQKNPKQEYKREAFELFAAMLDAVKQEVTRIVMNVQIQSPEQLEEAAEQIEEQGGQLGNVEFQHADFAAAAAASAG GAVVADATAEMVGHAMSHSGPAGEVPRVGRNDPCPCGSGKKYKHCHGKLS >Mature_929_residues TTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTGEFRQRIAAGESLDKLLPEAFAVCREASRRVLKM RHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNALAGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSGM EHDQKQAAYAADITYGTNNEFGFDYLRDNMVYETDARVQRPLNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMNA LPPLLERQIGEEKADGTGVEKPGDYTLDEKGRQVFLTESGHEKAERMLAEWGLIGDGESLYAPQNITLMHHVYAALRAHT LFHRDQHYVVQNGEVIIVDEFTGRLMPGRRWSDGLHQAVEAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTEA YEFNEIYGLETVVIPTNRPPKRIDKQDQIYKTAKERYDAVIRDIRECYERGQPVLVGTTSIENSELLSHLLKQAGLPHEV LNAKQHAREAAIVAEAGRPKRVTIATNMAGRGTDIVLGGNVEKQAAFIEADEAIPADEKARRIQQLHDEWETLHEQVKTA GGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSLEDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESAQ RKVEARNFDIRKQLLEYDDVSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVISEVVRQFVPAGSIEEQWDLPELEETLR NDWQLDLAIQEMVNESSSINADEILDAVTTAADEHYEAKVALVGRESFSAFERSIMLQTLDRLWREHLAALDHLRQGIHL RGYAQKNPKQEYKREAFELFAAMLDAVKQEVTRIVMNVQIQSPEQLEEAAEQIEEQGGQLGNVEFQHADFAAAAAASAGG AVVADATAEMVGHAMSHSGPAGEVPRVGRNDPCPCGSGKKYKHCHGKLS
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=930, Percent_Identity=59.4623655913978, Blast_Score=1093, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR020937 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 104253; Mature: 104122
Theoretical pI: Translated: 5.49; Mature: 5.49
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTGEFRQRIAAGESL CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHCCCHH DKLLPEAFAVCREASRRVLKMRHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LAGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSGMEHDQKQAAYAADITYGTNN HHCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEECCCC EFGFDYLRDNMVYETDARVQRPLNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMN CCCHHHHHCCCEEECCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEC ALPPLLERQIGEEKADGTGVEKPGDYTLDEKGRQVFLTESGHEKAERMLAEWGLIGDGES CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCC LYAPQNITLMHHVYAALRAHTLFHRDQHYVVQNGEVIIVDEFTGRLMPGRRWSDGLHQAV EECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHH EAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTEAYEFNEIYGLETVVIPTNRP HHHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCCCEEEEECCCCC PKRIDKQDQIYKTAKERYDAVIRDIRECYERGQPVLVGTTSIENSELLSHLLKQAGLPHE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHH VLNAKQHAREAAIVAEAGRPKRVTIATNMAGRGTDIVLGGNVEKQAAFIEADEAIPADEK HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHEEECCCCCCCHHH ARRIQQLHDEWETLHEQVKTAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE EDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDD CCCHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC VSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVISEVVRQFVPAGSIEEQWDLPELEETL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RNDWQLDLAIQEMVNESSSINADEILDAVTTAADEHYEAKVALVGRESFSAFERSIMLQT HCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHH LDRLWREHLAALDHLRQGIHLRGYAQKNPKQEYKREAFELFAAMLDAVKQEVTRIVMNVQ HHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IQSPEQLEEAAEQIEEQGGQLGNVEFQHADFAAAAAASAGGAVVADATAEMVGHAMSHSG CCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCCCCEEEHHHHHHHHHHHHCCC PAGEVPRVGRNDPCPCGSGKKYKHCHGKLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TTGFLQKIFGSRNQRLVKQYQKTVATINALETQIEKLTDDQLRGKTGEFRQRIAAGESL CHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHCCCHH DKLLPEAFAVCREASRRVLKMRHFDVQMIGGMVLHYGKIAEMRTGEGKTLVATLAAYLNA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH LAGRGVHVVTVNDYLAQRDAEWMGRLYNFLGLSVGINLSGMEHDQKQAAYAADITYGTNN HHCCCEEEEEECHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEEEECCCC EFGFDYLRDNMVYETDARVQRPLNFAVVDEVDSILIDEARTPLIISGQAEDHTELYVRMN CCCHHHHHCCCEEECCHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEC ALPPLLERQIGEEKADGTGVEKPGDYTLDEKGRQVFLTESGHEKAERMLAEWGLIGDGES CCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCC LYAPQNITLMHHVYAALRAHTLFHRDQHYVVQNGEVIIVDEFTGRLMPGRRWSDGLHQAV EECCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCCCHHHHHHHH EAKEHVKIQSENQTLASITFQNYFRMYAKLSGMTGTADTEAYEFNEIYGLETVVIPTNRP HHHHHCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHCCCCEEEEECCCCC PKRIDKQDQIYKTAKERYDAVIRDIRECYERGQPVLVGTTSIENSELLSHLLKQAGLPHE HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCHH VLNAKQHAREAAIVAEAGRPKRVTIATNMAGRGTDIVLGGNVEKQAAFIEADEAIPADEK HHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEECCCCHHHHHEEECCCCCCCHHH ARRIQQLHDEWETLHEQVKTAGGLHIIGTERHESRRIDNQLRGRAGRQGDPGSSRFYLSL HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEE EDPLLRIFAGDRVRAIMDRLKMPEGEAIEAGIVTRSIESAQRKVEARNFDIRKQLLEYDD CCCHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCC VSNDQRKVIYQQRNELLEAHDIAETIGAMRHGVISEVVRQFVPAGSIEEQWDLPELEETL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH RNDWQLDLAIQEMVNESSSINADEILDAVTTAADEHYEAKVALVGRESFSAFERSIMLQT HCCCEEHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHHH LDRLWREHLAALDHLRQGIHLRGYAQKNPKQEYKREAFELFAAMLDAVKQEVTRIVMNVQ HHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE IQSPEQLEEAAEQIEEQGGQLGNVEFQHADFAAAAAASAGGAVVADATAEMVGHAMSHSG CCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHCCCCCEEEHHHHHHHHHHHHCCC PAGEVPRVGRNDPCPCGSGKKYKHCHGKLS CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA