Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83721000
Identifier: 83721000
GI number: 83721000
Start: 1318825
End: 1320591
Strand: Direct
Name: 83721000
Synonym: BTH_I1173
Alternate gene names: NA
Gene position: 1318825-1320591 (Clockwise)
Preceding gene: 83721431
Following gene: 83720056
Centisome position: 34.62
GC content: 62.87
Gene sequence:
>1767_bases ATGTTTCGTCGTTTTTCAAATCGAAAGTTGTCGCGTATATTGGCCGACGCCTTGGCTTATCGGGCCGATCGAGCAAGGTG GGGGCGCCTATTCGGCCGCTCAAGAAAACAACACGAGAGAAGGAAGACGACTATGCCAGCACGTAAAACGCAGCTGCTAT TAGCCGCAGTATTCTCTTCGCTGCTCATCGCAGCGTGTAATGGAGATGACGTCGGTTCGACCGCGAGCGCCGCGGCTAGC GCGGATAGTTCGACCAGCATCGATGCCTCGCCGGGCACGGACAAACCCTACCGGGACCCCAATCGTTATTCGTCGAGCGC GAGCGCCTCGCTATCGCCTTCCGCCGTGACCGAGAACGCGGCGATCACGCACCACCAGATCACGGTGAACGGCAAGGCGA TCAACTACACCGCGACCGCCGGCCACCTGAGCGCGCGCAACCTGCAAAGCGGCGCGGCCGAAGCGTCGTTCTTCTACGTC GCGTACACGGTGGACAACCAGCCGCCCGGCAAGCGTCCCGTCACGTTCTTCTACAACGGCGGCCCCGGCTCGTCGACGGT CTGGCTGCATCTCGGCTCGTTCGGGCCGAAGCGTCTCGTGACAGGCGACCCGAACGCGAACAGCCCGACGCCGTTCCCGT TCGTCGATAACCAGGAGACGCTGCTCGACACGACCGACCTCGTGTTCGTCGACGCGATCGGCACGGGTTTTTCCGAGGCG ATCGCGCCGAACACGAACCAGACGTTCTGGGGCGTCGATCAGGATGCCGGAGCATTTCGCGATTTCGTGATCCGCTATCT GCAGGTGAATCAGCGCAACGATTCGCCGAAGTACCTGTTCGGCGAATCGTACGGCACGCCGCGCACCGACGTGCTCGCGA ACCTGCTCGAGACGGCGGGCGTGAAGCTCGACGGAATCGTGCTGCAATCGTCGATCCTCAACTACAACAGCAACTGCGAC ATGGCGAGCAATTCCGTCGGCAATTCGAGCAACGGATCGAGCACGGTGAGCTGCGCGGGCTTCGTGCCGAGCTACGGCGC GGTCGGCGCGTACTATCAGCTCGACAATCCGAACCCGGCGAACCTGCCGCAGTATGCGGACCAGATGCGTCTGCTCACGG CGGGCACCTATTCGCCGGCCGTGGACGCATATCTCGCGAACCACACGCAGCCGTCGCCCGGCCTCGTCACGACGATGTCG AACGCAACGGGCGCGACCGTGCCGCTCTGGCGCGCGAACTTCAACCTGCTGCCGACTTCGTATGACAACAGCTATCAGCT CGCGCTGATTCCGGGCACGCTGATCGGCCGCTACGACGCGCGCGTGAACGTGCCGGCGAACAGCCCGCTCGCTTCGGACG GCGACCCGTCGAGCACTTTCATCACGAAGCCGTTCACCGATACGATCGGCGCCTATTTGCCGAACGTGCTCAAGTACACG GCGAAATCGGCCTATGCTGTGCAGAGCAACGCGATTGCCTCATGGGACTGGAGCCACGACGGCCTCGATCTGCCCGACAC GATCCCCGATCTGGCCGCGGCACTCACGCTCAATCCCGCGCTGAAGGTGCTGTCGCTGAACGGCTATCACGACATCGCGA CGCCGTTCTATCAGACGGAACTCGATCTCGGCCGTCTCGGCGCGCAGCCTAACCTGACGATCAAGGACTACCAGGGCGGG CACATGGTTTACCTGGACGATACGTCCCGGCCGCAGGAAAAAGCCGATCTGGCGACGTTCTATGCGGCGACGCCCGCCGC GCGATGA
Upstream 100 bases:
>100_bases TCGGATTGACAAATCGCTGCTCAAGAGCCCGATTCCGTGCCGATTTCATTCAAATGGAAAATCGCGCATGAAAGAATAAA GTAAGGCGAATTTCTTTCAA
Downstream 100 bases:
>100_bases CGCCGAACGATGCCGCAGCGCCCGCCGCGCGATGCGCAACACGCGCCGCGCGGGCGGGACGTGAGGACCCCATTTCTCAT CGGAGCTGATATGAAAATCC
Product: serine-type carboxypeptidase family protein
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Acetoin Dehydrogenase E1 Component Beta-Subunit; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 588; Mature: 588
Protein sequence:
>588_residues MFRRFSNRKLSRILADALAYRADRARWGRLFGRSRKQHERRKTTMPARKTQLLLAAVFSSLLIAACNGDDVGSTASAAAS ADSSTSIDASPGTDKPYRDPNRYSSSASASLSPSAVTENAAITHHQITVNGKAINYTATAGHLSARNLQSGAAEASFFYV AYTVDNQPPGKRPVTFFYNGGPGSSTVWLHLGSFGPKRLVTGDPNANSPTPFPFVDNQETLLDTTDLVFVDAIGTGFSEA IAPNTNQTFWGVDQDAGAFRDFVIRYLQVNQRNDSPKYLFGESYGTPRTDVLANLLETAGVKLDGIVLQSSILNYNSNCD MASNSVGNSSNGSSTVSCAGFVPSYGAVGAYYQLDNPNPANLPQYADQMRLLTAGTYSPAVDAYLANHTQPSPGLVTTMS NATGATVPLWRANFNLLPTSYDNSYQLALIPGTLIGRYDARVNVPANSPLASDGDPSSTFITKPFTDTIGAYLPNVLKYT AKSAYAVQSNAIASWDWSHDGLDLPDTIPDLAAALTLNPALKVLSLNGYHDIATPFYQTELDLGRLGAQPNLTIKDYQGG HMVYLDDTSRPQEKADLATFYAATPAAR
Sequences:
>Translated_588_residues MFRRFSNRKLSRILADALAYRADRARWGRLFGRSRKQHERRKTTMPARKTQLLLAAVFSSLLIAACNGDDVGSTASAAAS ADSSTSIDASPGTDKPYRDPNRYSSSASASLSPSAVTENAAITHHQITVNGKAINYTATAGHLSARNLQSGAAEASFFYV AYTVDNQPPGKRPVTFFYNGGPGSSTVWLHLGSFGPKRLVTGDPNANSPTPFPFVDNQETLLDTTDLVFVDAIGTGFSEA IAPNTNQTFWGVDQDAGAFRDFVIRYLQVNQRNDSPKYLFGESYGTPRTDVLANLLETAGVKLDGIVLQSSILNYNSNCD MASNSVGNSSNGSSTVSCAGFVPSYGAVGAYYQLDNPNPANLPQYADQMRLLTAGTYSPAVDAYLANHTQPSPGLVTTMS NATGATVPLWRANFNLLPTSYDNSYQLALIPGTLIGRYDARVNVPANSPLASDGDPSSTFITKPFTDTIGAYLPNVLKYT AKSAYAVQSNAIASWDWSHDGLDLPDTIPDLAAALTLNPALKVLSLNGYHDIATPFYQTELDLGRLGAQPNLTIKDYQGG HMVYLDDTSRPQEKADLATFYAATPAAR >Mature_588_residues MFRRFSNRKLSRILADALAYRADRARWGRLFGRSRKQHERRKTTMPARKTQLLLAAVFSSLLIAACNGDDVGSTASAAAS ADSSTSIDASPGTDKPYRDPNRYSSSASASLSPSAVTENAAITHHQITVNGKAINYTATAGHLSARNLQSGAAEASFFYV AYTVDNQPPGKRPVTFFYNGGPGSSTVWLHLGSFGPKRLVTGDPNANSPTPFPFVDNQETLLDTTDLVFVDAIGTGFSEA IAPNTNQTFWGVDQDAGAFRDFVIRYLQVNQRNDSPKYLFGESYGTPRTDVLANLLETAGVKLDGIVLQSSILNYNSNCD MASNSVGNSSNGSSTVSCAGFVPSYGAVGAYYQLDNPNPANLPQYADQMRLLTAGTYSPAVDAYLANHTQPSPGLVTTMS NATGATVPLWRANFNLLPTSYDNSYQLALIPGTLIGRYDARVNVPANSPLASDGDPSSTFITKPFTDTIGAYLPNVLKYT AKSAYAVQSNAIASWDWSHDGLDLPDTIPDLAAALTLNPALKVLSLNGYHDIATPFYQTELDLGRLGAQPNLTIKDYQGG HMVYLDDTSRPQEKADLATFYAATPAAR
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63127; Mature: 63127
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRRFSNRKLSRILADALAYRADRARWGRLFGRSRKQHERRKTTMPARKTQLLLAAVFSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH LLIAACNGDDVGSTASAAASADSSTSIDASPGTDKPYRDPNRYSSSASASLSPSAVTENA HEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC AITHHQITVNGKAINYTATAGHLSARNLQSGAAEASFFYVAYTVDNQPPGKRPVTFFYNG EEEEEEEEECCEEEEEEECCCCCCHHHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEECC GPGSSTVWLHLGSFGPKRLVTGDPNANSPTPFPFVDNQETLLDTTDLVFVDAIGTGFSEA CCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCHHHH IAPNTNQTFWGVDQDAGAFRDFVIRYLQVNQRNDSPKYLFGESYGTPRTDVLANLLETAG CCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCC VKLDGIVLQSSILNYNSNCDMASNSVGNSSNGSSTVSCAGFVPSYGAVGAYYQLDNPNPA CEEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCC NLPQYADQMRLLTAGTYSPAVDAYLANHTQPSPGLVTTMSNATGATVPLWRANFNLLPTS CCHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCEEEECC YDNSYQLALIPGTLIGRYDARVNVPANSPLASDGDPSSTFITKPFTDTIGAYLPNVLKYT CCCCEEEEEECCCEEEEECCEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH AKSAYAVQSNAIASWDWSHDGLDLPDTIPDLAAALTLNPALKVLSLNGYHDIATPFYQTE HCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHCCCCCCCC LDLGRLGAQPNLTIKDYQGGHMVYLDDTSRPQEKADLATFYAATPAAR CCHHHCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHEEEECCCCCC >Mature Secondary Structure MFRRFSNRKLSRILADALAYRADRARWGRLFGRSRKQHERRKTTMPARKTQLLLAAVFSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHH LLIAACNGDDVGSTASAAASADSSTSIDASPGTDKPYRDPNRYSSSASASLSPSAVTENA HEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC AITHHQITVNGKAINYTATAGHLSARNLQSGAAEASFFYVAYTVDNQPPGKRPVTFFYNG EEEEEEEEECCEEEEEEECCCCCCHHHHCCCCCCEEEEEEEEEECCCCCCCCCEEEEECC GPGSSTVWLHLGSFGPKRLVTGDPNANSPTPFPFVDNQETLLDTTDLVFVDAIGTGFSEA CCCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCCHHHH IAPNTNQTFWGVDQDAGAFRDFVIRYLQVNQRNDSPKYLFGESYGTPRTDVLANLLETAG CCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHCC VKLDGIVLQSSILNYNSNCDMASNSVGNSSNGSSTVSCAGFVPSYGAVGAYYQLDNPNPA CEEEEEEEEHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCC NLPQYADQMRLLTAGTYSPAVDAYLANHTQPSPGLVTTMSNATGATVPLWRANFNLLPTS CCHHHHHHEEEEECCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEECCCEEEECC YDNSYQLALIPGTLIGRYDARVNVPANSPLASDGDPSSTFITKPFTDTIGAYLPNVLKYT CCCCEEEEEECCCEEEEECCEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHH AKSAYAVQSNAIASWDWSHDGLDLPDTIPDLAAALTLNPALKVLSLNGYHDIATPFYQTE HCCCEEEECCCEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCHHCCCCCCCC LDLGRLGAQPNLTIKDYQGGHMVYLDDTSRPQEKADLATFYAATPAAR CCHHHCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA