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The map label for this gene is degP [H]

Identifier: 83720925

GI number: 83720925

Start: 1933925

End: 1935382

Strand: Direct

Name: degP [H]

Synonym: BTH_I1726

Alternate gene names: 83720925

Gene position: 1933925-1935382 (Clockwise)

Preceding gene: 83719134

Following gene: 83720713

Centisome position: 50.77

GC content: 68.72

Gene sequence:

>1458_bases
TTGACGCCGCTTGCCGCGCAATCGGCGACGGCGGCTTCGAATGTCACGACCGCGCCTGCCGCCACGGGCGCCGCGCCCAC
GACGCGCGCCGGTTTGCCCGATTTCGCGGACCTCGTCGAGAGGGTCGGCCCGGCCGTCGTCAACATCCGGACGACGGCGA
ACGTGCCGGCCGATACGCGCGGCGCGCTGCCGCCCGGCCTCGACAACGGCGACATGTCGGAGTTCTTCCGCCGCTTCTTC
GGCATTCCGCTGCCGCAGCCGCCGGGCGGGCAGAAGAATGCGCCGAGCGCGCCCGACGCACCGGACACCGAGCAGAACCG
CGGCGTCGGCTCGGGCTTCATCCTGTCGCCGGACGGGTACGTGATGACGAACGCGCATGTCGTCGACGACGCGGACACGA
TCTACGTGACGCTCACCGACAAGCGCGAATTCAAGGCGAAGCTCATCGGCGTCGACGAGCGCACCGACGTCGCGATCGTG
AAGATCAACGCGTCGAGCCTGCCGACCGTTGCGATCGGCGATTCGAACCGCGTGCGCGTCGGCGAATGGGTCGTCGCGAT
CGGTTCGCCGTTCGGTCTCGACAACACGGTCACGGCCGGCATCGTCAGCGCGAAGGGCCGCAACACCGGCGACTATCTGC
CGTTCATCCAGACGGACGTCGCGGTCAACCCCGGCAACTCGGGCGGCCCGCTCATCAACATGCAGGGCGAGGTGATCGGC
ATCAACTCGCAGATCTACAGCCGCACGGGCGGTTTCATGGGGATCTCGTTCGCGATTCCGATCGACGAGGCGATGCGCGT
CGCCGAGCAGCTGAAAGCGTCGGGCAAGGTCACGCGCGGCCGGATCGCGGTCGCGATCGGCGAGGTGACGAAGGAAGTCG
CCGATTCGATCGGTTTGCCGAAGGCCGAAGGCGCGCTTGTCAGCAGCGTCGAGTCGGGCGGTCCGGCCGACAAGGCGGGC
CTCCAGCCGGGCGACATCATCCTGAAGTTCAACGGCCGTTCGGTCGAAACGGCGTCGGATCTGCCGCGCATGGTCGGCGA
CACGAAGCCGGGCACGAAGGCGACGGTGACGGTGTGGCGCAAGGGGCAGTCGCGCGATTTGCCGATCACGATCGCGGAAT
TCCCGGCCGACAAGATCGCGAAGGCAAGCAGCCGCCAGGCGCCGCAGCAGAAGCCGCGCAGCAGCGCGCTCGGCCTGGCG
GTCAGCGATCTGTCGCCCGAGCAGTTGAAGACGCTCAAGCTGCGCAACGGCGTGCAGATCGACGCGGTCGACGGCCCGGC
CGCGCGCGCGGGGCTGCAGCGCGGCGATATCGTGCTGCGCGTCGGCGACGTCGACATCTCGAGCGCGAAGCAGTTCGTCG
ACGTGACGTCGAAGCTCGATCCTCAGCGCGCGGTCGCGGTGCTCGTGCGGCGCGGCGACAACACGCAGTTCATCCCGATC
CGGCCGCGCCAGAAGTGA

Upstream 100 bases:

>100_bases
GCGTCTGCCATAGAATACAAGGCTTCCAAGTAACCTCTCGGTTTCCGACATGATGAATCCCTCGCTGCGCACCTGGCTCG
TCGCTGCGGCGGTGACGGCC

Downstream 100 bases:

>100_bases
TCGCCGCCGCGCGTTTCACGCTGTATGGCCGCGGCTGGTGCCATTTGTGCGACGACATGCGCGATGCGCTCGCGCCCGTG
GCGGCCGAATGCTCGGCGAG

Product: serine protease, MucD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MTPLAAQSATAASNVTTAPAATGAAPTTRAGLPDFADLVERVGPAVVNIRTTANVPADTRGALPPGLDNGDMSEFFRRFF
GIPLPQPPGGQKNAPSAPDAPDTEQNRGVGSGFILSPDGYVMTNAHVVDDADTIYVTLTDKREFKAKLIGVDERTDVAIV
KINASSLPTVAIGDSNRVRVGEWVVAIGSPFGLDNTVTAGIVSAKGRNTGDYLPFIQTDVAVNPGNSGGPLINMQGEVIG
INSQIYSRTGGFMGISFAIPIDEAMRVAEQLKASGKVTRGRIAVAIGEVTKEVADSIGLPKAEGALVSSVESGGPADKAG
LQPGDIILKFNGRSVETASDLPRMVGDTKPGTKATVTVWRKGQSRDLPITIAEFPADKIAKASSRQAPQQKPRSSALGLA
VSDLSPEQLKTLKLRNGVQIDAVDGPAARAGLQRGDIVLRVGDVDISSAKQFVDVTSKLDPQRAVAVLVRRGDNTQFIPI
RPRQK

Sequences:

>Translated_485_residues
MTPLAAQSATAASNVTTAPAATGAAPTTRAGLPDFADLVERVGPAVVNIRTTANVPADTRGALPPGLDNGDMSEFFRRFF
GIPLPQPPGGQKNAPSAPDAPDTEQNRGVGSGFILSPDGYVMTNAHVVDDADTIYVTLTDKREFKAKLIGVDERTDVAIV
KINASSLPTVAIGDSNRVRVGEWVVAIGSPFGLDNTVTAGIVSAKGRNTGDYLPFIQTDVAVNPGNSGGPLINMQGEVIG
INSQIYSRTGGFMGISFAIPIDEAMRVAEQLKASGKVTRGRIAVAIGEVTKEVADSIGLPKAEGALVSSVESGGPADKAG
LQPGDIILKFNGRSVETASDLPRMVGDTKPGTKATVTVWRKGQSRDLPITIAEFPADKIAKASSRQAPQQKPRSSALGLA
VSDLSPEQLKTLKLRNGVQIDAVDGPAARAGLQRGDIVLRVGDVDISSAKQFVDVTSKLDPQRAVAVLVRRGDNTQFIPI
RPRQK
>Mature_484_residues
TPLAAQSATAASNVTTAPAATGAAPTTRAGLPDFADLVERVGPAVVNIRTTANVPADTRGALPPGLDNGDMSEFFRRFFG
IPLPQPPGGQKNAPSAPDAPDTEQNRGVGSGFILSPDGYVMTNAHVVDDADTIYVTLTDKREFKAKLIGVDERTDVAIVK
INASSLPTVAIGDSNRVRVGEWVVAIGSPFGLDNTVTAGIVSAKGRNTGDYLPFIQTDVAVNPGNSGGPLINMQGEVIGI
NSQIYSRTGGFMGISFAIPIDEAMRVAEQLKASGKVTRGRIAVAIGEVTKEVADSIGLPKAEGALVSSVESGGPADKAGL
QPGDIILKFNGRSVETASDLPRMVGDTKPGTKATVTVWRKGQSRDLPITIAEFPADKIAKASSRQAPQQKPRSSALGLAV
SDLSPEQLKTLKLRNGVQIDAVDGPAARAGLQRGDIVLRVGDVDISSAKQFVDVTSKLDPQRAVAVLVRRGDNTQFIPIR
PRQK

Specific function: Protease With A Shared Specificity With Degp. [C]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PDZ (DHR) domains [H]

Homologues:

Organism=Homo sapiens, GI4506141, Length=355, Percent_Identity=34.9295774647887, Blast_Score=166, Evalue=4e-41,
Organism=Homo sapiens, GI22129776, Length=339, Percent_Identity=34.2182890855457, Blast_Score=152, Evalue=5e-37,
Organism=Homo sapiens, GI24308541, Length=250, Percent_Identity=36, Blast_Score=152, Evalue=1e-36,
Organism=Homo sapiens, GI7019477, Length=251, Percent_Identity=39.8406374501992, Blast_Score=147, Evalue=2e-35,
Organism=Escherichia coli, GI1789629, Length=460, Percent_Identity=35.6521739130435, Blast_Score=243, Evalue=3e-65,
Organism=Escherichia coli, GI1786356, Length=488, Percent_Identity=34.0163934426229, Blast_Score=240, Evalue=1e-64,
Organism=Escherichia coli, GI1789630, Length=277, Percent_Identity=38.9891696750903, Blast_Score=187, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24646839, Length=262, Percent_Identity=37.4045801526718, Blast_Score=160, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011782
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.- [C]

Molecular weight: Translated: 50665; Mature: 50534

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPLAAQSATAASNVTTAPAATGAAPTTRAGLPDFADLVERVGPAVVNIRTTANVPADTR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCC
GALPPGLDNGDMSEFFRRFFGIPLPQPPGGQKNAPSAPDAPDTEQNRGVGSGFILSPDGY
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCE
VMTNAHVVDDADTIYVTLTDKREFKAKLIGVDERTDVAIVKINASSLPTVAIGDSNRVRV
EEECCEEECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCEEE
GEWVVAIGSPFGLDNTVTAGIVSAKGRNTGDYLPFIQTDVAVNPGNSGGPLINMQGEVIG
CEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEECEEECCCCCCCCEEEECCCEEE
INSQIYSRTGGFMGISFAIPIDEAMRVAEQLKASGKVTRGRIAVAIGEVTKEVADSIGLP
ECHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCEECCEEEEEHHHHHHHHHHHCCCC
KAEGALVSSVESGGPADKAGLQPGDIILKFNGRSVETASDLPRMVGDTKPGTKATVTVWR
CCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEE
KGQSRDLPITIAEFPADKIAKASSRQAPQQKPRSSALGLAVSDLSPEQLKTLKLRNGVQI
CCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCHHCEEEEECCCHHHHHHHHHCCCCEE
DAVDGPAARAGLQRGDIVLRVGDVDISSAKQFVDVTSKLDPQRAVAVLVRRGDNTQFIPI
EECCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHEEEEEEEECCCCEEEEC
RPRQK
CCCCC
>Mature Secondary Structure 
TPLAAQSATAASNVTTAPAATGAAPTTRAGLPDFADLVERVGPAVVNIRTTANVPADTR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCC
GALPPGLDNGDMSEFFRRFFGIPLPQPPGGQKNAPSAPDAPDTEQNRGVGSGFILSPDGY
CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCE
VMTNAHVVDDADTIYVTLTDKREFKAKLIGVDERTDVAIVKINASSLPTVAIGDSNRVRV
EEECCEEECCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCEEE
GEWVVAIGSPFGLDNTVTAGIVSAKGRNTGDYLPFIQTDVAVNPGNSGGPLINMQGEVIG
CEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEEECEEECCCCCCCCEEEECCCEEE
INSQIYSRTGGFMGISFAIPIDEAMRVAEQLKASGKVTRGRIAVAIGEVTKEVADSIGLP
ECHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHCCCEECCEEEEEHHHHHHHHHHHCCCC
KAEGALVSSVESGGPADKAGLQPGDIILKFNGRSVETASDLPRMVGDTKPGTKATVTVWR
CCCCHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEEEEE
KGQSRDLPITIAEFPADKIAKASSRQAPQQKPRSSALGLAVSDLSPEQLKTLKLRNGVQI
CCCCCCCCEEEECCCCHHHHHHHHCCCCCCCCCCHHCEEEEECCCHHHHHHHHHCCCCEE
DAVDGPAARAGLQRGDIVLRVGDVDISSAKQFVDVTSKLDPQRAVAVLVRRGDNTQFIPI
EECCCCHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCCCHHHEEEEEEEECCCCEEEEC
RPRQK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7861951 [H]