Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is kpsS [H]
Identifier: 83720745
GI number: 83720745
Start: 1504710
End: 1505915
Strand: Direct
Name: kpsS [H]
Synonym: BTH_I1338
Alternate gene names: 83720745
Gene position: 1504710-1505915 (Clockwise)
Preceding gene: 83718930
Following gene: 83719336
Centisome position: 39.5
GC content: 64.51
Gene sequence:
>1206_bases ATGCCTCGCTCATTTCTTGTGCTGCAAGGCACGGCTTCATCGTTTTTCAGCCGATTGTCCGAAGCATTGTCGACGCGGGG GCACGCGGTGCGCCGGGTCAATTTCTGCGGCGGCGATCTTTTGTATGGCGGGGCGGTCGCGGCCTGGGACTATCGGGACG AGCCCGACGCGTTGCCCGAGTGGTACTTGCAAGCAGTCCGAACGGAGGGAGTGACCGATGTAGTCATGTTCGGCGACTGT CGTGAAATCCATCGGCACATGCATCCGGTCGCGCATGCCTGCGGGCTGCGCACGCACGTGTTCGAGGAGGGCTACATCCG CCCGCACTGGCTGACGCTCGAACGGTACGGCGTCAACGGGCGCTCACGGCTGTCGCGCGATCCGGCCTGGTATCTCGAGC AGCGCGGCGCCACGCCGCCGAGCCAGCCGGGGCGGCCGACCGGTTACAACCTTTACGAGCGCGCGTTCCACGATATCCGG TATCGTAGTGCGAACGCGTTTTACGCAAGCCGCTTCCCGCATTACAGCAGCCATCGTCCGCGGAACGGCTTCGTCGAATA TGCGGGACTCGCCGTGCGCGCGCTCCAGCAGAGCCGCCATCACGGCGAGGCGGAGAAGGTGGTGCGGGCGTTGCTCGAAT CGAAATGCGCCTATTATTTTTTTCCGCTGCAACTGGGCTCGGACGCGCAGATCGTCGTCCATTCGCCGTTCGACGGCATC CGCGACGCGATCGAGCGGGTGATGCGCTCGTTTGCGCGGCATGCGCGTTCCGATGCCGTACTCGTCATCAAGAACCATCC GCTCGACACGGGATTGATCGATTATCGGCGCTTCGCGCGCAAGCTGGCGGCCGAGCTGGACATCGCGAAGCGCCTGCGCT TCATCGATGCCGGCCATTTGCCGACGCTGCTCGAGCATGCGGCGGGCGTTGTCGTCGTCAACAGCACGGTGGGGCTGTCG GCGCTGCATCATTGCCGTCCGCTGATCGCGCTCGGCAGCGCGGTATACGCGATGCCGGGGCTGACGTGGCAAGGCAGCCT CGAGGATTTCTGGACGCAGGCCGGACCGCCCGACATGACTCTGTACCAAGCGTTTCTCGACTACGTGATGCATCACACCC AGATCAACGGCGACTTCTACACGCGCACCGGCATCGAGATGGCGACGGCGGGCGCGCTCGAACGGCTCGAGGCGGCGCGT GACTAG
Upstream 100 bases:
>100_bases AACCGCCTGCCGCAATATTTCAATATTCATAAAGTGTTCGTTCGAGGGGGAGAAAATATTTGCCCCTGGGCGACTCATTT CGCCGGTTGACATTTTTTCG
Downstream 100 bases:
>100_bases CGCCGCGCCGCATCATGTCGTCGTCACGGGCGCGAGCGCGGGGCTTGGCGGCGCGCTCGCGCTCGCGTATGCGGCGCCGG GCGTCGTGCTCGGGCTTGTC
Product: WcbO
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MPRSFLVLQGTASSFFSRLSEALSTRGHAVRRVNFCGGDLLYGGAVAAWDYRDEPDALPEWYLQAVRTEGVTDVVMFGDC REIHRHMHPVAHACGLRTHVFEEGYIRPHWLTLERYGVNGRSRLSRDPAWYLEQRGATPPSQPGRPTGYNLYERAFHDIR YRSANAFYASRFPHYSSHRPRNGFVEYAGLAVRALQQSRHHGEAEKVVRALLESKCAYYFFPLQLGSDAQIVVHSPFDGI RDAIERVMRSFARHARSDAVLVIKNHPLDTGLIDYRRFARKLAAELDIAKRLRFIDAGHLPTLLEHAAGVVVVNSTVGLS ALHHCRPLIALGSAVYAMPGLTWQGSLEDFWTQAGPPDMTLYQAFLDYVMHHTQINGDFYTRTGIEMATAGALERLEAAR D
Sequences:
>Translated_401_residues MPRSFLVLQGTASSFFSRLSEALSTRGHAVRRVNFCGGDLLYGGAVAAWDYRDEPDALPEWYLQAVRTEGVTDVVMFGDC REIHRHMHPVAHACGLRTHVFEEGYIRPHWLTLERYGVNGRSRLSRDPAWYLEQRGATPPSQPGRPTGYNLYERAFHDIR YRSANAFYASRFPHYSSHRPRNGFVEYAGLAVRALQQSRHHGEAEKVVRALLESKCAYYFFPLQLGSDAQIVVHSPFDGI RDAIERVMRSFARHARSDAVLVIKNHPLDTGLIDYRRFARKLAAELDIAKRLRFIDAGHLPTLLEHAAGVVVVNSTVGLS ALHHCRPLIALGSAVYAMPGLTWQGSLEDFWTQAGPPDMTLYQAFLDYVMHHTQINGDFYTRTGIEMATAGALERLEAAR D >Mature_400_residues PRSFLVLQGTASSFFSRLSEALSTRGHAVRRVNFCGGDLLYGGAVAAWDYRDEPDALPEWYLQAVRTEGVTDVVMFGDCR EIHRHMHPVAHACGLRTHVFEEGYIRPHWLTLERYGVNGRSRLSRDPAWYLEQRGATPPSQPGRPTGYNLYERAFHDIRY RSANAFYASRFPHYSSHRPRNGFVEYAGLAVRALQQSRHHGEAEKVVRALLESKCAYYFFPLQLGSDAQIVVHSPFDGIR DAIERVMRSFARHARSDAVLVIKNHPLDTGLIDYRRFARKLAAELDIAKRLRFIDAGHLPTLLEHAAGVVVVNSTVGLSA LHHCRPLIALGSAVYAMPGLTWQGSLEDFWTQAGPPDMTLYQAFLDYVMHHTQINGDFYTRTGIEMATAGALERLEAARD
Specific function: Unknown
COG id: COG3562
COG function: function code M; Capsule polysaccharide export protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007833 [H]
Pfam domain/function: PF05159 Capsule_synth [H]
EC number: NA
Molecular weight: Translated: 45238; Mature: 45107
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSFLVLQGTASSFFSRLSEALSTRGHAVRRVNFCGGDLLYGGAVAAWDYRDEPDALPE CCCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCEEEECCCCCCCCCHHH WYLQAVRTEGVTDVVMFGDCREIHRHMHPVAHACGLRTHVFEEGYIRPHWLTLERYGVNG HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCC RSRLSRDPAWYLEQRGATPPSQPGRPTGYNLYERAFHDIRYRSANAFYASRFPHYSSHRP HHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC RNGFVEYAGLAVRALQQSRHHGEAEKVVRALLESKCAYYFFPLQLGSDAQIVVHSPFDGI CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECCCHHH RDAIERVMRSFARHARSDAVLVIKNHPLDTGLIDYRRFARKLAAELDIAKRLRFIDAGHL HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PTLLEHAAGVVVVNSTVGLSALHHCRPLIALGSAVYAMPGLTWQGSLEDFWTQAGPPDMT HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHH LYQAFLDYVMHHTQINGDFYTRTGIEMATAGALERLEAARD HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PRSFLVLQGTASSFFSRLSEALSTRGHAVRRVNFCGGDLLYGGAVAAWDYRDEPDALPE CCCEEEEECCHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCEEEECCCCCCCCCHHH WYLQAVRTEGVTDVVMFGDCREIHRHMHPVAHACGLRTHVFEEGYIRPHWLTLERYGVNG HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCC RSRLSRDPAWYLEQRGATPPSQPGRPTGYNLYERAFHDIRYRSANAFYASRFPHYSSHRP HHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCC RNGFVEYAGLAVRALQQSRHHGEAEKVVRALLESKCAYYFFPLQLGSDAQIVVHSPFDGI CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEECCCHHH RDAIERVMRSFARHARSDAVLVIKNHPLDTGLIDYRRFARKLAAELDIAKRLRFIDAGHL HHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PTLLEHAAGVVVVNSTVGLSALHHCRPLIALGSAVYAMPGLTWQGSLEDFWTQAGPPDMT HHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHH LYQAFLDYVMHHTQINGDFYTRTGIEMATAGALERLEAARD HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8397187; 1735705 [H]