Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83720616
Identifier: 83720616
GI number: 83720616
Start: 1673675
End: 1675357
Strand: Direct
Name: 83720616
Synonym: BTH_I1478
Alternate gene names: NA
Gene position: 1673675-1675357 (Clockwise)
Preceding gene: 83721331
Following gene: 83720425
Centisome position: 43.94
GC content: 59.95
Gene sequence:
>1683_bases GTGTACAGCAATGTCGTCGAGCTGATCACGGAATTCGGCGCGCGAGATGGCGTGCATCTCGACATCGGCTGCGGATACGG CGCGATCGCGGAACCCGTTCGCGACCTCGGGCTCACGTACATCGGTTTCGATGCCGACGAGGATTCGCTGCGGGATTTGC AATCGCGAGGCTTCGAGGCGAAGCGAATTGACTTGCACCGTCTGGACGACGTGTTCGCGGAGATTGCCGCCGCCGTCAAC GGCCGCAATGTGGTGTCGATTTCAATTATCGATACGCTGGAGCACATTACAAATGGGCCGGCATTGCTCGACCGTCTGCG GGAGTTTGCCGAACAGCGTTCGATTCTGCTTGTGATCAGCGTGCCGAACGGCGGGCATCGCGATCTCGGCGCAAAGCTGC TTGCCGGGCATTGGGATTATACGGAGGTCGGCCTTCTCGATCATACGCACGTCATTCACCATACCGATCGCCTGCTGGCG GCGATGGCCAAGCGTGCCGGCTGGCACGAAGTGGGGGCGCGCGACTATGAGCTCGAATCCAGCGATCAGGCGTTCCCTCC GGCTCATCCGCTGTTGACGGGAAACACGGCGGCGTCACGCTATCTGCAGCAGATCCGTCGCGCTTCGGATGCTTTCGGGA CAGTGAACGAATTGGTGCGGGCTTACTTGCCGGGCGCGCGTCATGACGTTCCTCTGCTCGCCGATCCGAAAGAGGCACGG CCGTTTCTGTCAATCGTCACGCGTACGCAAGCCAAGCGGCTTGGCAATCTGCGCGATGTCCTGCTTTGCCTCACCGCACA GACTTGTCAGGACTTCGAAATCCTCGTCGTGACGCACAAAGTGGACGGCGATCCGTACTATGCCGTCAGGCGGATCGTCG AAGATTTGCCCGAGTCGATTCGCAATCGTGCGCGTGTGCTTCGTTGTGATCGGGGTGGCCGCACCGCGCCGCTGAATGAC GGTTTCGCCGCCGCGAGAGGGCATTACGTCGCGATTCTGGACGACGATGAGTTGGTCTTCGCGCACTGGGTCGAGACGTT CAAGAAGATGAGCGAGAAGGCGGCTGGCTGTGTGCTGCGCGCGACGGCCGCCGAGCAAGACATCGTGTCGACGGGCGTGC GGCCGGACGGGGCGCTCGGCTATCGGACCGTTTCGGCGATCACGACGCCGTACCCGTCGCACTTCGACCTTTTCGAGCAT CTATCACAAAATTATTCGCCGCCTGTATCGCTCGCGTTTCCGCGAGCGGCTTTTCAAGAGTTGGGCATCCGGTTCGACGA AGAGCTGGATACGGCGGAGGACTGGGACTTCGAAATGCGCACAGCCTTCGTCTGTGGCGTCGAGAGCAGCCCGGAAATTA CCGGTATCTACCGAAAGTGGCGTTCCGGCGAATCGTCCTTTTCGATCCATTCGCAGGACGAATGGCGGCGCGATTACGAA AGGATCGTAGCGAAGCACAACGCCGAGTATCACGTGTTTCCCCCAGGCACGATCAAGCTCATTGTCGATCAGCGCAACTG GATTAAGAAGCTCGAGCACGATATTGCCGTGCTGCAGGGCGCGGCAAAGCTCGATGCGTTGCGCCGGTTCTTTATCAGGC ATCCTCGTCTGTACCGGATGGTGCGGATGACCTACGACAATTCGAAGATCGTCGCTCGGAGAATCGTTCGGCGCTTGGGG TAA
Upstream 100 bases:
>100_bases CGGGCATCGCGTGGCTCAATTCGTCGATGGCTTCTACGCGAAACACCGCTTCTAAACTATGAATTCTGCAACTTATCAGT TCCACTATCACGAGTATTCG
Downstream 100 bases:
>100_bases TTCGTCGATGCCGGCGGGTGCGTGTCGTGTGTCACGAAGGCAGGAATAGAGATGCGGTTTGATATATCCGTCGTGGTGTA TCGAGAGACGGAGGAAACCC
Product: O-antigen methyl transferase
Products: NA
Alternate protein names: O-Antigen Biosynthesis Protein
Number of amino acids: Translated: 560; Mature: 560
Protein sequence:
>560_residues MYSNVVELITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLQSRGFEAKRIDLHRLDDVFAEIAAAVN GRNVVSISIIDTLEHITNGPALLDRLREFAEQRSILLVISVPNGGHRDLGAKLLAGHWDYTEVGLLDHTHVIHHTDRLLA AMAKRAGWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGARHDVPLLADPKEAR PFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGDPYYAVRRIVEDLPESIRNRARVLRCDRGGRTAPLND GFAAARGHYVAILDDDELVFAHWVETFKKMSEKAAGCVLRATAAEQDIVSTGVRPDGALGYRTVSAITTPYPSHFDLFEH LSQNYSPPVSLAFPRAAFQELGIRFDEELDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESSFSIHSQDEWRRDYE RIVAKHNAEYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDALRRFFIRHPRLYRMVRMTYDNSKIVARRIVRRLG
Sequences:
>Translated_560_residues MYSNVVELITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLQSRGFEAKRIDLHRLDDVFAEIAAAVN GRNVVSISIIDTLEHITNGPALLDRLREFAEQRSILLVISVPNGGHRDLGAKLLAGHWDYTEVGLLDHTHVIHHTDRLLA AMAKRAGWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGARHDVPLLADPKEAR PFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGDPYYAVRRIVEDLPESIRNRARVLRCDRGGRTAPLND GFAAARGHYVAILDDDELVFAHWVETFKKMSEKAAGCVLRATAAEQDIVSTGVRPDGALGYRTVSAITTPYPSHFDLFEH LSQNYSPPVSLAFPRAAFQELGIRFDEELDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESSFSIHSQDEWRRDYE RIVAKHNAEYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDALRRFFIRHPRLYRMVRMTYDNSKIVARRIVRRLG >Mature_560_residues MYSNVVELITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLQSRGFEAKRIDLHRLDDVFAEIAAAVN GRNVVSISIIDTLEHITNGPALLDRLREFAEQRSILLVISVPNGGHRDLGAKLLAGHWDYTEVGLLDHTHVIHHTDRLLA AMAKRAGWHEVGARDYELESSDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGARHDVPLLADPKEAR PFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGDPYYAVRRIVEDLPESIRNRARVLRCDRGGRTAPLND GFAAARGHYVAILDDDELVFAHWVETFKKMSEKAAGCVLRATAAEQDIVSTGVRPDGALGYRTVSAITTPYPSHFDLFEH LSQNYSPPVSLAFPRAAFQELGIRFDEELDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESSFSIHSQDEWRRDYE RIVAKHNAEYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDALRRFFIRHPRLYRMVRMTYDNSKIVARRIVRRLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63113; Mature: 63113
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSNVVELITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLQSRGFEA CCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCE KRIDLHRLDDVFAEIAAAVNGRNVVSISIIDTLEHITNGPALLDRLREFAEQRSILLVIS EHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEE VPNGGHRDLGAKLLAGHWDYTEVGLLDHTHVIHHTDRLLAAMAKRAGWHEVGARDYELES CCCCCCCCCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC SDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGARHDVPLLADPKEAR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH PFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGDPYYAVRRIVEDLPESI HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHH RNRARVLRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVETFKKMSEKAAGCVLR HHHHHEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEE ATAAEQDIVSTGVRPDGALGYRTVSAITTPYPSHFDLFEHLSQNYSPPVSLAFPRAAFQE EHHHHHHHHHCCCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCHHHHHH LGIRFDEELDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESSFSIHSQDEWRRDYE CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCEEECCHHHHHHHHH RIVAKHNAEYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDALRRFFIRHPRLYRM HHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VRMTYDNSKIVARRIVRRLG HHHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MYSNVVELITEFGARDGVHLDIGCGYGAIAEPVRDLGLTYIGFDADEDSLRDLQSRGFEA CCHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCCCE KRIDLHRLDDVFAEIAAAVNGRNVVSISIIDTLEHITNGPALLDRLREFAEQRSILLVIS EHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEEE VPNGGHRDLGAKLLAGHWDYTEVGLLDHTHVIHHTDRLLAAMAKRAGWHEVGARDYELES CCCCCCCCCCHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCC SDQAFPPAHPLLTGNTAASRYLQQIRRASDAFGTVNELVRAYLPGARHDVPLLADPKEAR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH PFLSIVTRTQAKRLGNLRDVLLCLTAQTCQDFEILVVTHKVDGDPYYAVRRIVEDLPESI HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHH RNRARVLRCDRGGRTAPLNDGFAAARGHYVAILDDDELVFAHWVETFKKMSEKAAGCVLR HHHHHEEEECCCCCCCCCCCCCHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCEEEE ATAAEQDIVSTGVRPDGALGYRTVSAITTPYPSHFDLFEHLSQNYSPPVSLAFPRAAFQE EHHHHHHHHHCCCCCCCCCCCEEHHHHCCCCCCHHHHHHHHHHCCCCCCEEECCHHHHHH LGIRFDEELDTAEDWDFEMRTAFVCGVESSPEITGIYRKWRSGESSFSIHSQDEWRRDYE CCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCCEEECCHHHHHHHHH RIVAKHNAEYHVFPPGTIKLIVDQRNWIKKLEHDIAVLQGAAKLDALRRFFIRHPRLYRM HHHHHCCCCEEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH VRMTYDNSKIVARRIVRRLG HHHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA