Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83720602
Identifier: 83720602
GI number: 83720602
Start: 1932194
End: 1932796
Strand: Direct
Name: 83720602
Synonym: BTH_I1724
Alternate gene names: NA
Gene position: 1932194-1932796 (Clockwise)
Preceding gene: 83718976
Following gene: 83719134
Centisome position: 50.72
GC content: 70.32
Gene sequence:
>603_bases ATGGGGTCGGTCTCTATGCAGTCGCAGGCGTGCTCGCAACGCGAGCGCATGTCCGCTCTGGTCGACGGCGAAGCGCCGGA GGGCCTTTCGCTGAAACAGATTCTCGCGGGGCTGGGCGACGCCGAGCGCGCGACCTGGGCGCAATATCACGTGATCGGTG ACGCGCTGCGCTCCGATGAGCTCACGCTCAAGCCCGCCGAGAGCAGCGCGTTCATGGCCCGCTTCTCGGCGAGCCTCGCG GCCGAGCCGCACCTGCTCGCGCCCGCGGCCGCACCCGTCGCGCGCCGGCTGCTGGCGCTGCGCCGCCGCGTCGTGCCCGC GTTCGCTGTCGCCGCCGCCGCGGCAACGCTGACGTGGATCGTCGTGCCGCAGATGCAGGGCGTCGGCGCGCCGGGCGCCG TGCAGGTCGCGTCGGTGAGCCCCGCGCAACAAGGCCCGCTGCAACGCGTGGCGGCTGCGCAGACGGGCGCGCAGGACGCG AACATCATTCGTGACGCGAGCCTCGATCAATATCTCGAAGCGCATCAGCAATTCGCGCAACAGCCCGTCGTGACGGGTTC GATGCCGGTCATTCGTACAGCGGTCACCACGCAAGGCCAATAA
Upstream 100 bases:
>100_bases AAGGCAGGCGCTGGTAAGCGCCTGCGGCGAATCGAAGCGGTTTGGGGTCTAGTTACGGAGTCGTGTGTCACGACGGGGTG TGTGCAAGATGGGGAGCATC
Downstream 100 bases:
>100_bases ACCCGATGCGGACGTTGCAGTTGAATCAAGCCATTCTCGGTTGGAGACGGCTGCCGGCGCTGCTGCTATGCGCGGCCGCG CTGTTGTCCGTCCAGTCCCC
Product: sigma factor algU regulatory protein MucA
Products: NA
Alternate protein names: Sigma Factor Negative Regulatory Protein RseA Family; Sigma Factor AlgU Regulatory Protein MucA; Anti Sigma-E Protein RseA Family Protein
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MGSVSMQSQACSQRERMSALVDGEAPEGLSLKQILAGLGDAERATWAQYHVIGDALRSDELTLKPAESSAFMARFSASLA AEPHLLAPAAAPVARRLLALRRRVVPAFAVAAAAATLTWIVVPQMQGVGAPGAVQVASVSPAQQGPLQRVAAAQTGAQDA NIIRDASLDQYLEAHQQFAQQPVVTGSMPVIRTAVTTQGQ
Sequences:
>Translated_200_residues MGSVSMQSQACSQRERMSALVDGEAPEGLSLKQILAGLGDAERATWAQYHVIGDALRSDELTLKPAESSAFMARFSASLA AEPHLLAPAAAPVARRLLALRRRVVPAFAVAAAAATLTWIVVPQMQGVGAPGAVQVASVSPAQQGPLQRVAAAQTGAQDA NIIRDASLDQYLEAHQQFAQQPVVTGSMPVIRTAVTTQGQ >Mature_199_residues GSVSMQSQACSQRERMSALVDGEAPEGLSLKQILAGLGDAERATWAQYHVIGDALRSDELTLKPAESSAFMARFSASLAA EPHLLAPAAAPVARRLLALRRRVVPAFAVAAAAATLTWIVVPQMQGVGAPGAVQVASVSPAQQGPLQRVAAAQTGAQDAN IIRDASLDQYLEAHQQFAQQPVVTGSMPVIRTAVTTQGQ
Specific function: Unknown
COG id: COG3073
COG function: function code T; Negative regulator of sigma E activity
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20876; Mature: 20745
Theoretical pI: Translated: 7.62; Mature: 7.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSVSMQSQACSQRERMSALVDGEAPEGLSLKQILAGLGDAERATWAQYHVIGDALRSDE CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC LTLKPAESSAFMARFSASLAAEPHLLAPAAAPVARRLLALRRRVVPAFAVAAAAATLTWI EEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VVPQMQGVGAPGAVQVASVSPAQQGPLQRVAAAQTGAQDANIIRDASLDQYLEAHQQFAQ EEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHH QPVVTGSMPVIRTAVTTQGQ CCCCCCCCHHHHHHHCCCCC >Mature Secondary Structure GSVSMQSQACSQRERMSALVDGEAPEGLSLKQILAGLGDAERATWAQYHVIGDALRSDE CCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCC LTLKPAESSAFMARFSASLAAEPHLLAPAAAPVARRLLALRRRVVPAFAVAAAAATLTWI EEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VVPQMQGVGAPGAVQVASVSPAQQGPLQRVAAAQTGAQDANIIRDASLDQYLEAHQQFAQ EEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHH QPVVTGSMPVIRTAVTTQGQ CCCCCCCCHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA